RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	HFM1	P51979	1187 aa		5.53	□□□□□ -1.52
SNL1	YIL016W	BUD9	P53226	547 aa		5.53	□□□□□ -1.52
SNL1	YIL016W	NOG2	P53742	486 aa	Known RBP	5.53	□□□□□ -1.52
SNL1	YIL016W	CRR1	Q05790	422 aa		5.53	□□□□□ -1.52
SNL1	YIL016W	YVC1	Q12324	675 aa		5.53	□□□□□ -1.52
SNL1	YIL016W	DPH6	Q12429	685 aa		5.53	□□□□□ -1.52
SNL1	YIL016W	RMP1	Q12530	201 aa		5.53	□□□□□ -1.52
SNL1	YIL016W	GAL1	P04385	528 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	SAM35	P14693	329 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	NAM7	P30771	971 aa	Known RBP	5.52	□□□□□ -1.53
SNL1	YIL016W	FUN30	P31380	1131 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	HSP78	P33416	811 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	SAP190	P36123	1033 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	HSL7	P38274	827 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	TDA3	P38758	523 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.52	□□□□□ -1.53	not detected
SNL1	YIL016W	GPP2	P40106	250 aa	Known RBP	5.52	□□□□□ -1.53
SNL1	YIL016W	RRT14	P40470	206 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	SHR5	P41912	237 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	HXT16	P47185	567 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	PIP2	P52960	996 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	YGR021W	P53212	290 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	SDH1	Q00711	640 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	MET14	Q02196	202 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	YDL176W	Q12027	708 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	SVS1	Q12254	260 aa		5.52	□□□□□ -1.53
SNL1	YIL016W	RPS9A	O13516	197 aa	Known RBP	5.51	□□□□□ -1.53
SNL1	YIL016W	DIF1	O13577	133 aa		5.51	□□□□□ -1.53
SNL1	YIL016W	NOT3	P06102	836 aa	Known RBP	5.51	□□□□□ -1.53
SNL1	YIL016W	MIH1	P23748	554 aa		5.51	□□□□□ -1.53
SNL1	YIL016W	CCR4	P31384	837 aa	Known RBP	5.51	□□□□□ -1.53
SNL1	YIL016W	SFA1	P32771	386 aa		5.51	□□□□□ -1.53
SNL1	YIL016W	WHI3	P34761	661 aa	Known RBP	5.51	□□□□□ -1.53
SNL1	YIL016W	ECM9	Q02202	377 aa		5.51	□□□□□ -1.53
SNL1	YIL016W	CEF1	Q03654	590 aa	Predicted RBP	5.51	□□□□□ -1.53
SNL1	YIL016W	RSC58	Q07979	502 aa		5.51	□□□□□ -1.53
SNL1	YIL016W	XYL2	Q07993	356 aa		5.51	□□□□□ -1.53
SNL1	YIL016W	ENA1	P13587	1091 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	MDL2	P33311	773 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	NIC96	P34077	839 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	DID4	P36108	232 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	ECM21	P38167	1117 aa	Known RBP	5.5	□□□□□ -1.53
SNL1	YIL016W	BIT2	P38346	545 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	SPC105	P53148	917 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	NPY1	P53164	384 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	ENA2	Q01896	1091 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	YDL121C	Q07541	149 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	NBA1	Q08229	501 aa	Known RBP	5.5	□□□□□ -1.53
SNL1	YIL016W	ENA5	Q12691	1091 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	YBR182C-A	Q8TGU6	64 aa		5.5	□□□□□ -1.53
SNL1	YIL016W	PGI1	P12709	554 aa	Known RBP	5.49	□□□□□ -1.53
SNL1	YIL016W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	not detected
SNL1	YIL016W	SRO9	P25567	434 aa	Known RBP	5.49	□□□□□ -1.53
SNL1	YIL016W	URA1	P28272	314 aa	Predicted RBP	5.49	□□□□□ -1.53
SNL1	YIL016W	RPD3	P32561	433 aa		5.49	□□□□□ -1.53
SNL1	YIL016W	AKR1	P39010	764 aa		5.49	□□□□□ -1.53
SNL1	YIL016W	CCT5	P40413	562 aa	Known RBP	5.49	□□□□□ -1.53
SNL1	YIL016W	MMM1	P41800	426 aa		5.49	□□□□□ -1.53
SNL1	YIL016W	RET2	P43621	546 aa		5.49	□□□□□ -1.53
SNL1	YIL016W	YGR035C	P53222	116 aa		5.49	□□□□□ -1.53
SNL1	YIL016W	PBP1	P53297	722 aa	Known RBP	5.49	□□□□□ -1.53
SNL1	YIL016W	HDA1	P53973	706 aa		5.49	□□□□□ -1.53
SNL1	YIL016W	UBX4	P54730	416 aa		5.49	□□□□□ -1.53
SNL1	YIL016W	Q0142	Q9ZZW4	58 aa		5.49	□□□□□ -1.53
SNL1	YIL016W	PRC1	P00729	532 aa		5.48	□□□□□ -1.53
SNL1	YIL016W	RPS21A	P0C0V8	87 aa	Known RBP	5.48	□□□□□ -1.53
SNL1	YIL016W	PTP2	P29461	750 aa		5.48	□□□□□ -1.53
SNL1	YIL016W	AIM26	P32858	118 aa		5.48	□□□□□ -1.53
SNL1	YIL016W	YAP1801	P38856	637 aa		5.48	□□□□□ -1.53
SNL1	YIL016W	YFL052W	P43551	465 aa		5.48	□□□□□ -1.53
SNL1	YIL016W	PRY1	P47032	299 aa		5.48	□□□□□ -1.53
SNL1	YIL016W	RCM1	P53972	490 aa		5.48	□□□□□ -1.53
SNL1	YIL016W	YHM2	Q04013	314 aa		5.48	□□□□□ -1.53
SNL1	YIL016W	PHM6	Q05637	104 aa		5.48	□□□□□ -1.53
SNL1	YIL016W	YOR022C	Q12204	715 aa		5.48	□□□□□ -1.53
SNL1	YIL016W	AI1	P03875	834 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	AI3	P03877	415 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	KCC4	P25389	1037 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	DPB3	P27344	201 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	APL1	P27351	700 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	HEM12	P32347	362 aa	Predicted RBP	5.47	□□□□□ -1.53
SNL1	YIL016W	STE13	P33894	931 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	YKR051W	P36142	418 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	RFC5	P38251	354 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	IES5	P40060	125 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	SLD3	P53135	668 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	VPS30	Q02948	557 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	RPN7	Q06103	429 aa	Known RBP	5.47	□□□□□ -1.53
SNL1	YIL016W	THI72	Q08579	599 aa		5.47	□□□□□ -1.53
SNL1	YIL016W	RPS21B	Q3E754	87 aa	Known RBP	5.47	□□□□□ -1.53
SNL1	YIL016W	PFK1	P16861	987 aa	Known RBP	5.46	□□□□□ -1.54
SNL1	YIL016W	COX11	P19516	300 aa	Known RBP	5.46	□□□□□ -1.54
SNL1	YIL016W	RPC82	P32349	654 aa		5.46	□□□□□ -1.54
SNL1	YIL016W	MNN4	P36044	1178 aa		5.46	□□□□□ -1.54
SNL1	YIL016W	YKL133C	P36066	463 aa		5.46	□□□□□ -1.54
SNL1	YIL016W	RIM4	P38741	713 aa		5.46	□□□□□ -1.54
SNL1	YIL016W	SET5	P38890	526 aa	Known RBP	5.46	□□□□□ -1.54
SNL1	YIL016W	HXT6	P39003	570 aa	Known RBP	5.46	□□□□□ -1.54
SNL1	YIL016W	HXT7	P39004	570 aa		5.46	□□□□□ -1.54
SNL1	YIL016W	HIS6	P40545	261 aa		5.46	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms