RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	TOM70	P07213	617 aa	Known RBP	4.13	□□□□□ -1.75
VMA10	YHR039C-A	RPL8A	P17076	256 aa	Known RBP	4.13	□□□□□ -1.75
VMA10	YHR039C-A	TSR4	P25040	408 aa		4.13	□□□□□ -1.75
VMA10	YHR039C-A	CDC20	P26309	610 aa		4.13	□□□□□ -1.75
VMA10	YHR039C-A	GRX4	P32642	244 aa		4.13	□□□□□ -1.75
VMA10	YHR039C-A	REC104	P33323	182 aa		4.13	□□□□□ -1.75
VMA10	YHR039C-A	POA1	P38218	177 aa		4.13	□□□□□ -1.75
VMA10	YHR039C-A	UBP12	P39538	1254 aa		4.13	□□□□□ -1.75
VMA10	YHR039C-A	MET12	P46151	657 aa		4.13	□□□□□ -1.75
VMA10	YHR039C-A	CCM1	P48237	864 aa	Predicted RBP	4.13	□□□□□ -1.75
VMA10	YHR039C-A	VPS62	P53285	467 aa		4.13	□□□□□ -1.75
VMA10	YHR039C-A	MDM12	Q92328	271 aa		4.13	□□□□□ -1.75
VMA10	YHR039C-A	YLR358C	O13565	187 aa		4.12	□□□□□ -1.75
VMA10	YHR039C-A	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
VMA10	YHR039C-A	EMC1	P25574	760 aa		4.12	□□□□□ -1.75
VMA10	YHR039C-A	PEX6	P33760	1030 aa		4.12	□□□□□ -1.75
VMA10	YHR039C-A	YAP6	Q03935	383 aa		4.12	□□□□□ -1.75
VMA10	YHR039C-A	NOT3	P06102	836 aa	Known RBP	4.11	□□□□□ -1.75
VMA10	YHR039C-A	HIS5	P07172	385 aa		4.11	□□□□□ -1.75
VMA10	YHR039C-A	SPE1	P08432	466 aa		4.11	□□□□□ -1.75
VMA10	YHR039C-A	MEF1	P25039	761 aa		4.11	□□□□□ -1.75
VMA10	YHR039C-A	ZDS1	P50111	915 aa	Known RBP	4.11	□□□□□ -1.75
VMA10	YHR039C-A	RAI1	P53063	387 aa	Known RBP	4.11	□□□□□ -1.75
VMA10	YHR039C-A	YNR029C	P53729	429 aa	Known RBP	4.11	□□□□□ -1.75
VMA10	YHR039C-A	YLR224W	Q05947	369 aa		4.11	□□□□□ -1.75
VMA10	YHR039C-A	ADR1	P07248	1323 aa		4.11	□□□□□ -1.75
VMA10	YHR039C-A	LST4	P34239	828 aa		4.1	□□□□□ -1.75
VMA10	YHR039C-A	FLR1	P38124	548 aa		4.1	□□□□□ -1.75
VMA10	YHR039C-A	CRP1	P38845	465 aa	Known RBP	4.1	□□□□□ -1.75
VMA10	YHR039C-A	CHA4	P43634	648 aa		4.1	□□□□□ -1.75
VMA10	YHR039C-A	PSP2	P50109	593 aa	Known RBP	4.1	□□□□□ -1.75
VMA10	YHR039C-A	TFB2	Q02939	513 aa		4.1	□□□□□ -1.75
VMA10	YHR039C-A	WHI4	Q07655	649 aa	Known RBP	4.1	□□□□□ -1.75
VMA10	YHR039C-A	ESC8	Q08119	714 aa		4.1	□□□□□ -1.75
VMA10	YHR039C-A	NOP12	Q08208	459 aa	Known RBP	4.1	□□□□□ -1.75
VMA10	YHR039C-A	RAD53	P22216	821 aa		4.09	□□□□□ -1.75
VMA10	YHR039C-A	RFA1	P22336	621 aa	Known RBP	4.09	□□□□□ -1.75
VMA10	YHR039C-A	STE13	P33894	931 aa		4.09	□□□□□ -1.75
VMA10	YHR039C-A	PLB1	P39105	664 aa		4.09	□□□□□ -1.75
VMA10	YHR039C-A	ALG2	P43636	503 aa		4.09	□□□□□ -1.75
VMA10	YHR039C-A	TAF1	P46677	1066 aa		4.09	□□□□□ -1.75
VMA10	YHR039C-A	YNL193W	P53870	558 aa		4.09	□□□□□ -1.75
VMA10	YHR039C-A	CLU1	Q03690	1277 aa	Known RBP	4.09	□□□□□ -1.75
VMA10	YHR039C-A	ENV7	Q12003	364 aa		4.09	□□□□□ -1.75
VMA10	YHR039C-A	SSB1	P11484	613 aa	Known RBP	4.08	□□□□□ -1.76
VMA10	YHR039C-A	SFP1	P32432	683 aa		4.08	□□□□□ -1.76
VMA10	YHR039C-A	ATG19	P35193	415 aa		4.08	□□□□□ -1.76
VMA10	YHR039C-A	SSB2	P40150	613 aa	Known RBP	4.08	□□□□□ -1.76
VMA10	YHR039C-A	URM1	P40554	99 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA10	YHR039C-A	HDA1	P53973	706 aa		4.08	□□□□□ -1.76
VMA10	YHR039C-A	SSL1	Q04673	461 aa	Predicted RBP	4.08	□□□□□ -1.76
VMA10	YHR039C-A	TMA10	Q06177	86 aa		4.08	□□□□□ -1.76
VMA10	YHR039C-A	YLR001C	Q07895	862 aa		4.08	□□□□□ -1.76
VMA10	YHR039C-A	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
VMA10	YHR039C-A	RPP2A	P05319	106 aa	Known RBP	4.07	□□□□□ -1.76
VMA10	YHR039C-A	VBA3	P25594	458 aa		4.07	□□□□□ -1.76
VMA10	YHR039C-A	RPD3	P32561	433 aa		4.07	□□□□□ -1.76
VMA10	YHR039C-A	SPC29	P33419	253 aa		4.07	□□□□□ -1.76
VMA10	YHR039C-A	TOM20	P35180	183 aa		4.07	□□□□□ -1.76
VMA10	YHR039C-A	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
VMA10	YHR039C-A	DSS1	P39112	969 aa		4.07	□□□□□ -1.76
VMA10	YHR039C-A	YEN1	P40028	759 aa		4.07	□□□□□ -1.76
VMA10	YHR039C-A	CEP3	P40969	608 aa		4.07	□□□□□ -1.76
VMA10	YHR039C-A	GYP8	P43570	497 aa		4.07	□□□□□ -1.76
VMA10	YHR039C-A	TY4A-J	P47023	414 aa		4.07	□□□□□ -1.76
VMA10	YHR039C-A	YGR283C	P53336	341 aa	Predicted RBP	4.07	□□□□□ -1.76
VMA10	YHR039C-A	CDC9	P04819	755 aa		4.06	□□□□□ -1.76
VMA10	YHR039C-A	GSY1	P23337	708 aa		4.06	□□□□□ -1.76
VMA10	YHR039C-A	URA1	P28272	314 aa	Predicted RBP	4.06	□□□□□ -1.76
VMA10	YHR039C-A	GIP4	P39732	760 aa		4.06	□□□□□ -1.76
VMA10	YHR039C-A	NCS6	P53088	359 aa		4.06	□□□□□ -1.76
VMA10	YHR039C-A	MCM6	P53091	1017 aa	Known RBP	4.06	□□□□□ -1.76
VMA10	YHR039C-A	VPS30	Q02948	557 aa		4.06	□□□□□ -1.76
VMA10	YHR039C-A	ATP25	Q03153	612 aa		4.06	□□□□□ -1.76
VMA10	YHR039C-A	UPC2	Q12151	913 aa		4.06	□□□□□ -1.76
VMA10	YHR039C-A	KCS1	Q12494	1050 aa		4.06	□□□□□ -1.76
VMA10	YHR039C-A	FBP1	P09201	348 aa		4.05	□□□□□ -1.76
VMA10	YHR039C-A	MPH2	P0CD99	609 aa		4.05	□□□□□ -1.76
VMA10	YHR039C-A	YCR015C	P25616	317 aa		4.05	□□□□□ -1.76
VMA10	YHR039C-A	STE14	P32584	239 aa		4.05	□□□□□ -1.76
VMA10	YHR039C-A	MTC2	P34246	357 aa		4.05	□□□□□ -1.76
VMA10	YHR039C-A	EMC3	P36039	253 aa		4.05	□□□□□ -1.76
VMA10	YHR039C-A	HLJ1	P48353	224 aa		4.05	□□□□□ -1.76
VMA10	YHR039C-A	NIT3	P49954	291 aa		4.05	□□□□□ -1.76
VMA10	YHR039C-A	MNN10	P50108	393 aa	Known RBP	4.05	□□□□□ -1.76
VMA10	YHR039C-A	DAM1	P53267	343 aa		4.05	□□□□□ -1.76
VMA10	YHR039C-A	RPS9A	O13516	197 aa	Known RBP	4.04	□□□□□ -1.76
VMA10	YHR039C-A	SRD1	P09007	221 aa		4.04	□□□□□ -1.76
VMA10	YHR039C-A	STE11	P23561	717 aa		4.04	□□□□□ -1.76
VMA10	YHR039C-A	SED4	P25365	1065 aa		4.04	□□□□□ -1.76
VMA10	YHR039C-A	CTS1	P29029	562 aa		4.04	□□□□□ -1.76
VMA10	YHR039C-A	TYE7	P33122	291 aa	Predicted RBP	4.04	□□□□□ -1.76
VMA10	YHR039C-A	SHM2	P37291	469 aa	Known RBP	4.04	□□□□□ -1.76
VMA10	YHR039C-A	YIL108W	P40483	696 aa	Known RBP	4.04	□□□□□ -1.76
VMA10	YHR039C-A	PMT3	P47190	753 aa		4.04	□□□□□ -1.76
VMA10	YHR039C-A	YKR011C	Q02209	353 aa		4.04	□□□□□ -1.76
VMA10	YHR039C-A	NPC2	Q12408	173 aa		4.04	□□□□□ -1.76
VMA10	YHR039C-A	DAL7	P21826	554 aa		4.03	□□□□□ -1.76
VMA10	YHR039C-A	CYS3	P31373	394 aa	Known RBP	4.03	□□□□□ -1.76
VMA10	YHR039C-A	YEL1	P34225	687 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms