RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C YPL277CQ08989 487 aa14.6□□□□□ -0.07
SHU1YHL006C RPL4AP10664 362 aaKnown RBP14.59□□□□□ -0.07
SHU1YHL006C BMH1P29311 267 aaKnown RBP14.59□□□□□ -0.07
SHU1YHL006C PEX2P32800 271 aa14.59□□□□□ -0.07
SHU1YHL006C CCC2P38995 1004 aa14.59□□□□□ -0.07
SHU1YHL006C MGA2P40578 1113 aa14.59□□□□□ -0.07
SHU1YHL006C RPL4BP49626 362 aaKnown RBP14.59□□□□□ -0.07
SHU1YHL006C ALG11P53954 548 aaKnown RBP14.59□□□□□ -0.07
SHU1YHL006C MAP1Q01662 387 aaKnown RBP RIP-Chip data14.59□□□□□ -0.07not detected
SHU1YHL006C SHS1Q07657 551 aa14.59□□□□□ -0.07
SHU1YHL006C ESC8Q08119 714 aa14.59□□□□□ -0.07
SHU1YHL006C DAL7P21826 554 aa14.58□□□□□ -0.08
SHU1YHL006C EEB1Q02891 456 aa14.58□□□□□ -0.08
SHU1YHL006C PIG1Q06216 648 aa14.58□□□□□ -0.08
SHU1YHL006C MRI1Q06489 411 aaKnown RBP14.58□□□□□ -0.08
SHU1YHL006C MRN1Q08925 612 aaKnown RBP RIP-Chip data14.58□□□□□ -0.08not detected
SHU1YHL006C CDC53Q12018 815 aaKnown RBP14.58□□□□□ -0.08
SHU1YHL006C HIR1P32479 840 aa14.57□□□□□ -0.08
SHU1YHL006C MMS4P38257 691 aa14.57□□□□□ -0.08
SHU1YHL006C MMF1P40185 145 aaKnown RBP14.57□□□□□ -0.08
SHU1YHL006C ULI1P43604 169 aa14.57□□□□□ -0.08
SHU1YHL006C SHE10P53075 577 aa14.57□□□□□ -0.08
SHU1YHL006C DNL4Q08387 944 aaPredicted RBP14.57□□□□□ -0.08
SHU1YHL006C OSH2Q12451 1283 aa14.57□□□□□ -0.08
SHU1YHL006C CIT2P08679 460 aa14.56□□□□□ -0.08
SHU1YHL006C CDC15P27636 974 aa14.56□□□□□ -0.08
SHU1YHL006C PRR1P28708 518 aa14.56□□□□□ -0.08
SHU1YHL006C YEL023CP39992 682 aa14.56□□□□□ -0.08
SHU1YHL006C MAF1P41910 395 aa14.56□□□□□ -0.08
SHU1YHL006C YFL034WP43564 1073 aa14.56□□□□□ -0.08
SHU1YHL006C ASN1P49089 572 aaKnown RBP14.56□□□□□ -0.08
SHU1YHL006C STB4P50104 949 aa14.56□□□□□ -0.08
SHU1YHL006C NBP1P52919 319 aaPredicted RBP14.56□□□□□ -0.08
SHU1YHL006C VID30P53076 958 aa14.56□□□□□ -0.08
SHU1YHL006C TFC8Q12308 588 aa14.56□□□□□ -0.08
SHU1YHL006C TAF13P11747 167 aa14.55□□□□□ -0.08
SHU1YHL006C RAD54P32863 898 aa14.55□□□□□ -0.08
SHU1YHL006C RFT1P38206 574 aaPredicted RBP14.55□□□□□ -0.08
SHU1YHL006C SCD6P45978 349 aaKnown RBP RIP-Chip data14.55□□□□□ -0.08not detected
SHU1YHL006C RCR2Q03446 210 aaKnown RBP14.55□□□□□ -0.08
SHU1YHL006C PUS1Q12211 544 aaKnown RBP14.55□□□□□ -0.08
SHU1YHL006C PHO8P11491 566 aa14.54□□□□□ -0.08
SHU1YHL006C YGR130CP53278 816 aa14.54□□□□□ -0.08
SHU1YHL006C CWC21Q03375 135 aaKnown RBP14.54□□□□□ -0.08
SHU1YHL006C UTP14Q04500 899 aaKnown RBP14.54□□□□□ -0.08
SHU1YHL006C PCT1P13259 424 aa14.53□□□□□ -0.08
SHU1YHL006C PEX1P24004 1043 aa14.53□□□□□ -0.08
SHU1YHL006C BIM1P40013 344 aa14.53□□□□□ -0.08
SHU1YHL006C YJL045WP47052 634 aa14.53□□□□□ -0.08
SHU1YHL006C YLR257WQ06146 321 aaKnown RBP14.53□□□□□ -0.08
SHU1YHL006C HAP2P06774 265 aa14.52□□□□□ -0.09
SHU1YHL006C TRK2P28584 889 aa14.52□□□□□ -0.09
SHU1YHL006C MNR2P35724 969 aa14.52□□□□□ -0.09
SHU1YHL006C HUL4P40985 892 aa14.52□□□□□ -0.09
SHU1YHL006C PLP2Q12017 286 aa14.52□□□□□ -0.09
SHU1YHL006C REC8Q12188 680 aa14.52□□□□□ -0.09
SHU1YHL006C MNL2Q12205 849 aa14.52□□□□□ -0.09
SHU1YHL006C RAD59Q12223 238 aa14.52□□□□□ -0.09
SHU1YHL006C SNF1P06782 633 aaKnown RBP14.51□□□□□ -0.09
SHU1YHL006C COQ8P27697 501 aa14.51□□□□□ -0.09
SHU1YHL006C CYS3P31373 394 aaKnown RBP14.51□□□□□ -0.09
SHU1YHL006C TRM2P33753 639 aa14.51□□□□□ -0.09
SHU1YHL006C CCM1P48237 864 aaPredicted RBP14.51□□□□□ -0.09
SHU1YHL006C SNU56Q03782 492 aaKnown RBP14.51□□□□□ -0.09
SHU1YHL006C PEX19Q07418 342 aa14.51□□□□□ -0.09
SHU1YHL006C SGO1Q08490 590 aa14.51□□□□□ -0.09
SHU1YHL006C TCO89Q08921 799 aa14.51□□□□□ -0.09
SHU1YHL006C PCM1P38628 557 aaKnown RBP14.5□□□□□ -0.09
SHU1YHL006C YPL216WQ08964 1102 aa14.5□□□□□ -0.09
SHU1YHL006C KEX2P13134 814 aa14.49□□□□□ -0.09
SHU1YHL006C PPZ1P26570 692 aa14.49□□□□□ -0.09
SHU1YHL006C HMT1P38074 348 aa14.49□□□□□ -0.09
SHU1YHL006C SAF1P38352 637 aa14.49□□□□□ -0.09
SHU1YHL006C HSH155P49955 971 aaKnown RBP14.49□□□□□ -0.09
SHU1YHL006C NUT1P53114 1132 aa14.49□□□□□ -0.09
SHU1YHL006C YML083CQ04526 418 aa14.49□□□□□ -0.09
SHU1YHL006C RAD27P26793 382 aa14.48□□□□□ -0.09
SHU1YHL006C MRF1P30775 413 aaPredicted RBP14.48□□□□□ -0.09
SHU1YHL006C MUD1P32605 298 aaKnown RBP14.48□□□□□ -0.09
SHU1YHL006C NPP2P39997 493 aa14.48□□□□□ -0.09
SHU1YHL006C LCB2P40970 561 aa14.48□□□□□ -0.09
SHU1YHL006C SPC98P53540 846 aa14.48□□□□□ -0.09
SHU1YHL006C TLG2Q08144 397 aa14.48□□□□□ -0.09
SHU1YHL006C CTF3Q12748 733 aa14.48□□□□□ -0.09
SHU1YHL006C ASP3-2P0CX77 362 aa14.47□□□□□ -0.09
SHU1YHL006C ASP3-3P0CX78 362 aa14.47□□□□□ -0.09
SHU1YHL006C ASP3-4P0CX79 362 aa14.47□□□□□ -0.09
SHU1YHL006C ASP3-1P0CZ17 362 aa14.47□□□□□ -0.09
SHU1YHL006C SNF7P39929 240 aaKnown RBP14.47□□□□□ -0.09
SHU1YHL006C MOB1P40484 314 aa14.47□□□□□ -0.09
SHU1YHL006C STP1Q00947 519 aa14.47□□□□□ -0.09
SHU1YHL006C CDD1Q06549 142 aa14.47□□□□□ -0.09
SHU1YHL006C SDH5Q08230 162 aa14.47□□□□□ -0.09
SHU1YHL006C LAA1P39526 2014 aa14.47□□□□□ -0.09
SHU1YHL006C ATP1P07251 545 aaKnown RBP14.46□□□□□ -0.09
SHU1YHL006C APE1P14904 514 aa14.46□□□□□ -0.09
SHU1YHL006C VMA1P17255 1071 aaKnown RBP14.46□□□□□ -0.09
SHU1YHL006C PTC4P38089 393 aa14.46□□□□□ -0.09
SHU1YHL006C PEX28P38848 579 aa14.46□□□□□ -0.09
SHU1YHL006C SPE1P08432 466 aa14.45□□□□□ -0.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms