RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W PHO23P50947 330 aa2.83□□□□□ -1.96
SMD1YGR074W DNM1P54861 757 aa2.83□□□□□ -1.96
SMD1YGR074W TFB2Q02939 513 aa2.83□□□□□ -1.96
SMD1YGR074W VPS30Q02948 557 aa2.83□□□□□ -1.96
SMD1YGR074W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
SMD1YGR074W YLL058WQ12198 575 aa2.83□□□□□ -1.96
SMD1YGR074W OSW2Q12202 724 aa2.83□□□□□ -1.96
SMD1YGR074W NUP145P49687 1317 aa2.83□□□□□ -1.96
SMD1YGR074W PMA1P05030 918 aaKnown RBP2.82□□□□□ -1.96
SMD1YGR074W RPL8AP17076 256 aaKnown RBP2.82□□□□□ -1.96
SMD1YGR074W SNF5P18480 905 aa2.82□□□□□ -1.96
SMD1YGR074W VBA3P25594 458 aa2.82□□□□□ -1.96
SMD1YGR074W CDC48P25694 835 aaKnown RBP2.82□□□□□ -1.96
SMD1YGR074W APL1P27351 700 aa2.82□□□□□ -1.96
SMD1YGR074W RPC82P32349 654 aa2.82□□□□□ -1.96
SMD1YGR074W SLA2P33338 968 aa2.82□□□□□ -1.96
SMD1YGR074W YKR078WP36158 585 aaKnown RBP2.82□□□□□ -1.96
SMD1YGR074W TOK1P40310 691 aa2.82□□□□□ -1.96
SMD1YGR074W GTF1P53260 183 aaPredicted RBP2.82□□□□□ -1.96
SMD1YGR074W SDA1P53313 767 aaKnown RBP2.82□□□□□ -1.96
SMD1YGR074W YNR029CP53729 429 aaKnown RBP2.82□□□□□ -1.96
SMD1YGR074W YDR514CQ04408 483 aa2.82□□□□□ -1.96
SMD1YGR074W YLR224WQ05947 369 aa2.82□□□□□ -1.96
SMD1YGR074W SVS1Q12254 260 aa2.82□□□□□ -1.96
SMD1YGR074W MDM12Q92328 271 aa2.82□□□□□ -1.96
SMD1YGR074W RPS9AO13516 197 aaKnown RBP2.81□□□□□ -1.96
SMD1YGR074W BI4P03879 638 aa2.81□□□□□ -1.96
SMD1YGR074W FUN30P31380 1131 aa2.81□□□□□ -1.96
SMD1YGR074W DCG1P32460 244 aa2.81□□□□□ -1.96
SMD1YGR074W DEF1P35732 738 aaKnown RBP2.81□□□□□ -1.96
SMD1YGR074W RPN10P38886 268 aaKnown RBP2.81□□□□□ -1.96
SMD1YGR074W YEN1P40028 759 aa2.81□□□□□ -1.96
SMD1YGR074W YER158CP40095 573 aa2.81□□□□□ -1.96
SMD1YGR074W GYP7P48365 746 aa2.81□□□□□ -1.96
SMD1YGR074W YGR237CP50089 785 aa2.81□□□□□ -1.96
SMD1YGR074W YNL193WP53870 558 aa2.81□□□□□ -1.96
SMD1YGR074W HRQ1Q05549 1077 aa2.81□□□□□ -1.96
SMD1YGR074W REH1Q06709 432 aa2.81□□□□□ -1.96
SMD1YGR074W MDM38Q08179 573 aa2.81□□□□□ -1.96
SMD1YGR074W CDC6P09119 513 aa2.8□□□□□ -1.96
SMD1YGR074W ACE2P21192 770 aa2.8□□□□□ -1.96
SMD1YGR074W GRX4P32642 244 aa2.8□□□□□ -1.96
SMD1YGR074W SPC29P33419 253 aa2.8□□□□□ -1.96
SMD1YGR074W STO1P34160 861 aaKnown RBP2.8□□□□□ -1.96
SMD1YGR074W SAP190P36123 1033 aa2.8□□□□□ -1.96
SMD1YGR074W CHS7P38843 316 aa2.8□□□□□ -1.96
SMD1YGR074W UBP12P39538 1254 aa2.8□□□□□ -1.96
SMD1YGR074W DOT6P40059 670 aaKnown RBP2.8□□□□□ -1.96
SMD1YGR074W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
SMD1YGR074W VPS62P53285 467 aa2.8□□□□□ -1.96
SMD1YGR074W SRT1Q03175 343 aa2.8□□□□□ -1.96
SMD1YGR074W YAP6Q03935 383 aa2.8□□□□□ -1.96
SMD1YGR074W ATG13Q06628 738 aa2.8□□□□□ -1.96
SMD1YGR074W NOP12Q08208 459 aaKnown RBP2.8□□□□□ -1.96
SMD1YGR074W MPH2P0CD99 609 aa2.79□□□□□ -1.96
SMD1YGR074W RAD18P10862 487 aa2.79□□□□□ -1.96
SMD1YGR074W YEL1P34225 687 aa2.79□□□□□ -1.96
SMD1YGR074W EMC3P36039 253 aa2.79□□□□□ -1.96
SMD1YGR074W GRX7P38068 203 aa2.79□□□□□ -1.96
SMD1YGR074W YBR238CP38330 731 aaKnown RBP2.79□□□□□ -1.96
SMD1YGR074W TSL1P38427 1098 aaKnown RBP2.79□□□□□ -1.96
SMD1YGR074W MSS4P38994 779 aa2.79□□□□□ -1.96
SMD1YGR074W SHR5P41912 237 aa2.79□□□□□ -1.96
SMD1YGR074W YFL054CP43549 646 aa2.79□□□□□ -1.96
SMD1YGR074W PSP2P50109 593 aaKnown RBP2.79□□□□□ -1.96
SMD1YGR074W ZDS1P50111 915 aaKnown RBP2.79□□□□□ -1.96
SMD1YGR074W UBA2P52488 636 aa2.79□□□□□ -1.96
SMD1YGR074W PUS2P53167 370 aa2.79□□□□□ -1.96
SMD1YGR074W YGR283CP53336 341 aaPredicted RBP2.79□□□□□ -1.96
SMD1YGR074W NOG2P53742 486 aaKnown RBP2.79□□□□□ -1.96
SMD1YGR074W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
SMD1YGR074W KIN4Q01919 800 aa2.79□□□□□ -1.96
SMD1YGR074W HFD1Q04458 532 aa2.79□□□□□ -1.96
SMD1YGR074W COG8Q04632 607 aa2.79□□□□□ -1.96
SMD1YGR074W RSC3Q06639 885 aa2.79□□□□□ -1.96
SMD1YGR074W THI73Q07904 523 aa2.79□□□□□ -1.96
SMD1YGR074W AIM39Q08223 395 aa2.79□□□□□ -1.96
SMD1YGR074W FAP7Q12055 197 aaPredicted RBP2.79□□□□□ -1.96
SMD1YGR074W SRD1P09007 221 aa2.78□□□□□ -1.96
SMD1YGR074W NPP1P25353 742 aa2.78□□□□□ -1.96
SMD1YGR074W EMC1P25574 760 aa2.78□□□□□ -1.96
SMD1YGR074W MRC1P25588 1096 aa2.78□□□□□ -1.96
SMD1YGR074W OAR1P35731 278 aa2.78□□□□□ -1.96
SMD1YGR074W YKL151CP36059 337 aa2.78□□□□□ -1.96
SMD1YGR074W CEP3P40969 608 aa2.78□□□□□ -1.96
SMD1YGR074W CAF16P43569 289 aa2.78□□□□□ -1.96
SMD1YGR074W ALY2P47029 1046 aa2.78□□□□□ -1.96
SMD1YGR074W GCV2P49095 1034 aa2.78□□□□□ -1.96
SMD1YGR074W MAL11P53048 616 aa2.78□□□□□ -1.96
SMD1YGR074W UME1Q03010 460 aa2.78□□□□□ -1.96
SMD1YGR074W GUD1Q07729 489 aa2.78□□□□□ -1.96
SMD1YGR074W MET7Q08645 548 aa2.78□□□□□ -1.96
SMD1YGR074W ENV7Q12003 364 aa2.78□□□□□ -1.96
SMD1YGR074W HMI1Q12039 706 aa2.78□□□□□ -1.96
SMD1YGR074W PRC1P00729 532 aa2.77□□□□□ -1.97
SMD1YGR074W CDC9P04819 755 aa2.77□□□□□ -1.97
SMD1YGR074W ENA1P13587 1091 aa2.77□□□□□ -1.97
SMD1YGR074W MEF1P25039 761 aa2.77□□□□□ -1.97
SMD1YGR074W PER1P25625 357 aa2.77□□□□□ -1.97
SMD1YGR074W CYS3P31373 394 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms