RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W RPL34AP87262 121 aaPredicted RBP7.41□□□□□ -1.22
NUP49YGL172W CUS1Q02554 436 aaPredicted RBP7.41□□□□□ -1.22
NUP49YGL172W GFD1Q04839 188 aaKnown RBP7.41□□□□□ -1.22
NUP49YGL172W HCR1Q05775 265 aaKnown RBP7.41□□□□□ -1.22
NUP49YGL172W CUR1Q06469 252 aa7.41□□□□□ -1.22
NUP49YGL172W TCO89Q08921 799 aa7.41□□□□□ -1.22
NUP49YGL172W HFI1Q12060 488 aa7.41□□□□□ -1.22
NUP49YGL172W CDC37P06101 506 aaKnown RBP7.4□□□□□ -1.22
NUP49YGL172W PHO8P11491 566 aa7.4□□□□□ -1.22
NUP49YGL172W WHI2P12611 486 aa7.4□□□□□ -1.22
NUP49YGL172W MAC1P35192 417 aa7.4□□□□□ -1.22
NUP49YGL172W TVP23P38962 199 aa7.4□□□□□ -1.22
NUP49YGL172W FIR1P40020 876 aa7.4□□□□□ -1.22
NUP49YGL172W MOT1P32333 1867 aa7.39□□□□□ -1.23
NUP49YGL172W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
NUP49YGL172W POT1P27796 417 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
NUP49YGL172W MNN4P36044 1178 aa7.39□□□□□ -1.23
NUP49YGL172W AIP1P46680 615 aaKnown RBP7.39□□□□□ -1.23
NUP49YGL172W JJJ3P47138 172 aa7.39□□□□□ -1.23
NUP49YGL172W VID30P53076 958 aa7.39□□□□□ -1.23
NUP49YGL172W YNL115CP53925 644 aa7.39□□□□□ -1.23
NUP49YGL172W VTC3Q02725 835 aa7.39□□□□□ -1.23
NUP49YGL172W FMP30Q02883 468 aa7.39□□□□□ -1.23
NUP49YGL172W EBS1Q03466 884 aaKnown RBP7.39□□□□□ -1.23
NUP49YGL172W MED1Q12321 566 aa7.39□□□□□ -1.23
NUP49YGL172W TAF13P11747 167 aa7.38□□□□□ -1.23
NUP49YGL172W MRC1P25588 1096 aa7.38□□□□□ -1.23
NUP49YGL172W CDC3P32457 520 aaKnown RBP7.38□□□□□ -1.23
NUP49YGL172W DPH2P32461 534 aa7.38□□□□□ -1.23
NUP49YGL172W TMT1P32643 299 aa7.38□□□□□ -1.23
NUP49YGL172W MRPL10P36520 322 aa7.38□□□□□ -1.23
NUP49YGL172W PSY4P38193 441 aa7.38□□□□□ -1.23
NUP49YGL172W YBL036CP38197 257 aa7.38□□□□□ -1.23
NUP49YGL172W VID24P38263 362 aa7.38□□□□□ -1.23
NUP49YGL172W YFL040WP43562 540 aa7.38□□□□□ -1.23
NUP49YGL172W CUL3P53202 744 aa7.38□□□□□ -1.23
NUP49YGL172W ENV11P53246 860 aa7.38□□□□□ -1.23
NUP49YGL172W WAR1Q03631 944 aa7.38□□□□□ -1.23
NUP49YGL172W LCD1Q04377 747 aa7.38□□□□□ -1.23
NUP49YGL172W YAP7Q08182 245 aa7.38□□□□□ -1.23
NUP49YGL172W TMA16Q08687 178 aa7.38□□□□□ -1.23
NUP49YGL172W LDB19Q12502 818 aa7.38□□□□□ -1.23
NUP49YGL172W MAK16P10962 306 aaPredicted RBP7.37□□□□□ -1.23
NUP49YGL172W YET1P35723 206 aa7.37□□□□□ -1.23
NUP49YGL172W DRE2P36152 348 aa7.37□□□□□ -1.23
NUP49YGL172W ORC5P50874 479 aa7.37□□□□□ -1.23
NUP49YGL172W MNP1P53163 194 aaPredicted RBP7.37□□□□□ -1.23
NUP49YGL172W MUK1Q02866 612 aa7.37□□□□□ -1.23
NUP49YGL172W MLH2Q07980 695 aa7.37□□□□□ -1.23
NUP49YGL172W MUD1P32605 298 aaKnown RBP7.36□□□□□ -1.23
NUP49YGL172W RPC25P35718 212 aa7.36□□□□□ -1.23
NUP49YGL172W GRS1P38088 690 aaKnown RBP7.36□□□□□ -1.23
NUP49YGL172W SPT8P38915 602 aa7.36□□□□□ -1.23
NUP49YGL172W UBP5P39944 805 aa7.36□□□□□ -1.23
NUP49YGL172W LCB2P40970 561 aa7.36□□□□□ -1.23
NUP49YGL172W ULI1P43604 169 aa7.36□□□□□ -1.23
NUP49YGL172W TRS130Q03660 1102 aa7.36□□□□□ -1.23
NUP49YGL172W UTP14Q04500 899 aaKnown RBP7.36□□□□□ -1.23
NUP49YGL172W ZPS1Q12512 249 aa7.36□□□□□ -1.23
NUP49YGL172W ADE4P04046 510 aaKnown RBP7.35□□□□□ -1.23
NUP49YGL172W CHS2P14180 963 aa7.35□□□□□ -1.23
NUP49YGL172W CLC1P17891 233 aa7.35□□□□□ -1.23
NUP49YGL172W FUB1P25659 250 aa7.35□□□□□ -1.23
NUP49YGL172W HEM3P28789 327 aa7.35□□□□□ -1.23
NUP49YGL172W SKG6P32900 734 aaPredicted RBP7.35□□□□□ -1.23
NUP49YGL172W WHI3P34761 661 aaKnown RBP7.35□□□□□ -1.23
NUP49YGL172W ASN1P49089 572 aaKnown RBP7.35□□□□□ -1.23
NUP49YGL172W HSH155P49955 971 aaKnown RBP7.35□□□□□ -1.23
NUP49YGL172W SHE10P53075 577 aa7.35□□□□□ -1.23
NUP49YGL172W TIM8P57744 87 aa7.35□□□□□ -1.23
NUP49YGL172W ECM7Q06200 448 aa7.35□□□□□ -1.23
NUP49YGL172W SHS1Q07657 551 aa7.35□□□□□ -1.23
NUP49YGL172W SPO75Q07798 868 aa7.35□□□□□ -1.23
NUP49YGL172W NOB1Q08444 459 aaKnown RBP7.35□□□□□ -1.23
NUP49YGL172W CDC53Q12018 815 aaKnown RBP7.35□□□□□ -1.23
NUP49YGL172W SWI6P09959 803 aa7.35□□□□□ -1.23
NUP49YGL172W VMA1P17255 1071 aaKnown RBP7.35□□□□□ -1.23
NUP49YGL172W SCD6P45978 349 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23 RIP-Chip
NUP49YGL172W GCV2P49095 1034 aa7.35□□□□□ -1.23
NUP49YGL172W YNL134CP53912 376 aaKnown RBP7.35□□□□□ -1.23
NUP49YGL172W GIR2Q03768 265 aaPredicted RBP7.35□□□□□ -1.23
NUP49YGL172W DOT1Q04089 582 aaKnown RBP7.35□□□□□ -1.23
NUP49YGL172W COG4Q06096 861 aa7.35□□□□□ -1.23
NUP49YGL172W RIF1P29539 1916 aa7.34□□□□□ -1.23
NUP49YGL172W COX4P04037 155 aa7.34□□□□□ -1.23
NUP49YGL172W HIP1P06775 603 aa7.34□□□□□ -1.23
NUP49YGL172W TOM70P07213 617 aaKnown RBP7.34□□□□□ -1.23
NUP49YGL172W GLN3P18494 730 aa7.34□□□□□ -1.23
NUP49YGL172W ADE2P21264 571 aaKnown RBP7.34□□□□□ -1.23
NUP49YGL172W CAD1P24813 409 aaKnown RBP7.34□□□□□ -1.23
NUP49YGL172W MSH3P25336 1018 aa7.34□□□□□ -1.23
NUP49YGL172W PIN4P34217 668 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
NUP49YGL172W SAP190P36123 1033 aa7.34□□□□□ -1.23
NUP49YGL172W MRX3P38172 270 aa7.34□□□□□ -1.23
NUP49YGL172W MMS4P38257 691 aa7.34□□□□□ -1.23
NUP49YGL172W MIP6P38760 659 aaKnown RBP7.34□□□□□ -1.23
NUP49YGL172W CTM1P38818 585 aa7.34□□□□□ -1.23
NUP49YGL172W NPP2P39997 493 aa7.34□□□□□ -1.23
NUP49YGL172W TFG2P41896 400 aaPredicted RBP7.34□□□□□ -1.23
NUP49YGL172W LAM5P43560 674 aa7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms