RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W COX6P00427 148 aa2.53□□□□□ -2
SPF1YEL031W HIS4P00815 799 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W RPL6BP05739 176 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W MRPL25P23369 157 aa2.53□□□□□ -2
SPF1YEL031W DPB2P24482 689 aaPredicted RBP2.53□□□□□ -2
SPF1YEL031W MEF1P25039 761 aa2.53□□□□□ -2
SPF1YEL031W RPC53P25441 422 aa2.53□□□□□ -2
SPF1YEL031W MCM4P30665 933 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W HIR2P32480 875 aa2.53□□□□□ -2
SPF1YEL031W SMY2P32909 740 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W RRP8P38961 392 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W PCF11P39081 626 aaPredicted RBP2.53□□□□□ -2
SPF1YEL031W PDS1P40316 373 aaPredicted RBP2.53□□□□□ -2
SPF1YEL031W COS5P47187 383 aa2.53□□□□□ -2
SPF1YEL031W TAF6P53040 516 aa2.53□□□□□ -2
SPF1YEL031W KAP114P53067 1004 aa2.53□□□□□ -2
SPF1YEL031W YGL108CP53139 140 aa2.53□□□□□ -2
SPF1YEL031W YGR054WP53235 642 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W CPR6P53691 371 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W EBS1Q03466 884 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W URH1Q04179 340 aa2.53□□□□□ -2
SPF1YEL031W SVF1Q05515 481 aa2.53□□□□□ -2
SPF1YEL031W PIG1Q06216 648 aa2.53□□□□□ -2
SPF1YEL031W YIG1Q08956 461 aa2.53□□□□□ -2
SPF1YEL031W AFT2Q08957 416 aa2.53□□□□□ -2
SPF1YEL031W DUR1,2P32528 1835 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W POL3P15436 1097 aa2.53□□□□□ -2
SPF1YEL031W SPO12P17123 173 aa2.53□□□□□ -2
SPF1YEL031W DBP5P20449 482 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W BUD23P25627 275 aaPredicted RBP2.53□□□□□ -2
SPF1YEL031W APL1P27351 700 aa2.53□□□□□ -2
SPF1YEL031W URA1P28272 314 aaPredicted RBP2.53□□□□□ -2
SPF1YEL031W GCD6P32501 712 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W RIB7P33312 244 aa2.53□□□□□ -2
SPF1YEL031W SAS3P34218 831 aa2.53□□□□□ -2
SPF1YEL031W UGA2P38067 497 aa2.53□□□□□ -2
SPF1YEL031W UBP14P38237 781 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W RCK2P38623 610 aa2.53□□□□□ -2
SPF1YEL031W SER3P40054 469 aa2.53□□□□□ -2
SPF1YEL031W PSY2P40164 858 aa2.53□□□□□ -2
SPF1YEL031W UBP6P43593 499 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W STB2P46679 850 aa2.53□□□□□ -2
SPF1YEL031W YJR054WP47114 497 aa2.53□□□□□ -2
SPF1YEL031W YGR021WP53212 290 aa2.53□□□□□ -2
SPF1YEL031W UTP22P53254 1237 aaPredicted RBP2.53□□□□□ -2
SPF1YEL031W CNM67P53865 581 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W SFB2P53953 876 aa2.53□□□□□ -2
SPF1YEL031W ALD6P54115 500 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W LGE1Q02796 332 aaKnown RBP2.53□□□□□ -2
SPF1YEL031W HOT1Q03213 719 aa2.53□□□□□ -2
SPF1YEL031W YMR196WQ04336 1088 aa2.53□□□□□ -2
SPF1YEL031W MGR3Q04472 501 aa2.53□□□□□ -2
SPF1YEL031W SOV1Q04748 898 aa2.53□□□□□ -2
SPF1YEL031W YLH47Q06493 454 aa2.53□□□□□ -2
SPF1YEL031W SSP2Q08646 371 aa2.53□□□□□ -2
SPF1YEL031W BUD7Q08754 746 aa2.53□□□□□ -2
SPF1YEL031W GYP5Q12344 894 aa2.53□□□□□ -2
SPF1YEL031W SNU66Q12420 587 aaPredicted RBP2.53□□□□□ -2
SPF1YEL031W ARG4P04076 463 aaPredicted RBP2.53□□□□□ -2.01
SPF1YEL031W MAK16P10962 306 aaPredicted RBP2.53□□□□□ -2.01
SPF1YEL031W GFA1P14742 717 aaKnown RBP2.53□□□□□ -2.01
SPF1YEL031W NMT1P14743 455 aa2.53□□□□□ -2.01
SPF1YEL031W RPS5P26783 225 aaKnown RBP2.53□□□□□ -2.01
SPF1YEL031W SMI1P32566 505 aa2.53□□□□□ -2.01
SPF1YEL031W YEL1P34225 687 aa2.53□□□□□ -2.01
SPF1YEL031W GTT3P39996 337 aa2.53□□□□□ -2.01
SPF1YEL031W HXT8P40886 569 aa2.53□□□□□ -2.01
SPF1YEL031W VTC2P43585 828 aa2.53□□□□□ -2.01
SPF1YEL031W APL6P46682 809 aa2.53□□□□□ -2.01
SPF1YEL031W NMD5P46970 1048 aa2.53□□□□□ -2.01
SPF1YEL031W YNR029CP53729 429 aaKnown RBP2.53□□□□□ -2.01
SPF1YEL031W PTA1Q01329 785 aaPredicted RBP2.53□□□□□ -2.01
SPF1YEL031W YCS4Q06156 1176 aa2.53□□□□□ -2.01
SPF1YEL031W ALE1Q08548 619 aa2.53□□□□□ -2.01
SPF1YEL031W BRR1Q99177 341 aaPredicted RBP2.53□□□□□ -2.01
SPF1YEL031W ALG1P16661 449 aa2.52□□□□□ -2.01
SPF1YEL031W VPS3P23643 1011 aa2.52□□□□□ -2.01
SPF1YEL031W SCJ1P25303 377 aa2.52□□□□□ -2.01
SPF1YEL031W MSH2P25847 964 aa2.52□□□□□ -2.01
SPF1YEL031W HEM3P28789 327 aa2.52□□□□□ -2.01
SPF1YEL031W PLC1P32383 869 aa2.52□□□□□ -2.01
SPF1YEL031W EUG1P32474 517 aa2.52□□□□□ -2.01
SPF1YEL031W BLI1P35727 113 aa2.52□□□□□ -2.01
SPF1YEL031W STS1P38637 319 aa2.52□□□□□ -2.01
SPF1YEL031W DAK2P43550 591 aa2.52□□□□□ -2.01
SPF1YEL031W URB2P47108 1174 aa2.52□□□□□ -2.01
SPF1YEL031W RPA14P50106 137 aa2.52□□□□□ -2.01
SPF1YEL031W MIG2P53035 382 aa2.52□□□□□ -2.01
SPF1YEL031W YGR122WP53272 402 aa2.52□□□□□ -2.01
SPF1YEL031W HST2P53686 357 aa2.52□□□□□ -2.01
SPF1YEL031W IMP4P53941 290 aaKnown RBP2.52□□□□□ -2.01
SPF1YEL031W UME1Q03010 460 aa2.52□□□□□ -2.01
SPF1YEL031W CWC15Q03772 175 aaKnown RBP2.52□□□□□ -2.01
SPF1YEL031W YMR111CQ04461 462 aaPredicted RBP2.52□□□□□ -2.01
SPF1YEL031W SEC10Q06245 871 aa2.52□□□□□ -2.01
SPF1YEL031W VAM6Q07468 1049 aa2.52□□□□□ -2.01
SPF1YEL031W YOR296WQ08748 1289 aa2.52□□□□□ -2.01
SPF1YEL031W UTP10P42945 1769 aaKnown RBP2.52□□□□□ -2.01
SPF1YEL031W RPS6AP0CX37 236 aaKnown RBP2.52□□□□□ -2.01
SPF1YEL031W RPS6BP0CX38 236 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms