RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C KIC1P38692 1080 aa3.89□□□□□ -1.79
TRS120YDR407C GPB2P39717 880 aa3.89□□□□□ -1.79
TRS120YDR407C SAP185P40856 1058 aa3.89□□□□□ -1.79
TRS120YDR407C TDA10P42938 290 aa3.89□□□□□ -1.79
TRS120YDR407C EIS1Q05050 843 aaKnown RBP3.89□□□□□ -1.79
TRS120YDR407C AI5_BETAQ9ZZX0 354 aa3.89□□□□□ -1.79
TRS120YDR407C SNF1P06782 633 aaKnown RBP3.89□□□□□ -1.79
TRS120YDR407C RNR1P21524 888 aaKnown RBP3.89□□□□□ -1.79
TRS120YDR407C RPC53P25441 422 aa3.89□□□□□ -1.79
TRS120YDR407C SAP190P36123 1033 aa3.89□□□□□ -1.79
TRS120YDR407C SPP381P38282 291 aaPredicted RBP3.89□□□□□ -1.79
TRS120YDR407C TRS85P46944 698 aa3.89□□□□□ -1.79
TRS120YDR407C ADA2Q02336 434 aa3.89□□□□□ -1.79
TRS120YDR407C RBA50Q04418 439 aa3.89□□□□□ -1.79
TRS120YDR407C YLR287CQ05881 355 aa3.89□□□□□ -1.79
TRS120YDR407C KEL3Q08979 651 aaPredicted RBP3.89□□□□□ -1.79
TRS120YDR407C RIB2Q12362 591 aaKnown RBP3.89□□□□□ -1.79
TRS120YDR407C HIF1Q12373 385 aa3.89□□□□□ -1.79
TRS120YDR407C UBP1P25037 809 aa3.89□□□□□ -1.79
TRS120YDR407C YKL222CP35995 705 aa3.89□□□□□ -1.79
TRS120YDR407C VRP1P37370 817 aa3.89□□□□□ -1.79
TRS120YDR407C REV7P38927 245 aa3.89□□□□□ -1.79
TRS120YDR407C CAJ1P39101 391 aa3.89□□□□□ -1.79
TRS120YDR407C GUP1P53154 560 aa3.89□□□□□ -1.79
TRS120YDR407C MDR1P53258 950 aa3.89□□□□□ -1.79
TRS120YDR407C PUS6P53294 404 aa3.89□□□□□ -1.79
TRS120YDR407C SOL4P53315 255 aa3.89□□□□□ -1.79
TRS120YDR407C CDC8P00572 216 aa3.88□□□□□ -1.79
TRS120YDR407C ISW1P38144 1129 aa3.88□□□□□ -1.79
TRS120YDR407C EMP47P43555 445 aa3.88□□□□□ -1.79
TRS120YDR407C DAS1P47005 663 aa3.88□□□□□ -1.79
TRS120YDR407C BRO1P48582 844 aa3.88□□□□□ -1.79
TRS120YDR407C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
TRS120YDR407C YPL062WQ02781 134 aa3.88□□□□□ -1.79
TRS120YDR407C ATG16Q03818 150 aa3.88□□□□□ -1.79
TRS120YDR407C SUE1Q06524 206 aa3.88□□□□□ -1.79
TRS120YDR407C SSA2P10592 639 aaKnown RBP3.88□□□□□ -1.79
TRS120YDR407C RPS7AP26786 190 aaKnown RBP3.88□□□□□ -1.79
TRS120YDR407C LOS1P33418 1100 aaPredicted RBP3.88□□□□□ -1.79
TRS120YDR407C HOS4P40480 1083 aa3.88□□□□□ -1.79
TRS120YDR407C AIM21P40563 679 aa3.88□□□□□ -1.79
TRS120YDR407C FYV8P46949 817 aaKnown RBP3.88□□□□□ -1.79
TRS120YDR407C SPH1Q06160 661 aa3.88□□□□□ -1.79
TRS120YDR407C OAF3P36023 863 aa3.88□□□□□ -1.79
TRS120YDR407C SHC1P39000 512 aa3.88□□□□□ -1.79
TRS120YDR407C TOS3P43637 560 aa3.88□□□□□ -1.79
TRS120YDR407C MSN5P52918 1224 aa3.88□□□□□ -1.79
TRS120YDR407C CWC22P53333 577 aaKnown RBP3.88□□□□□ -1.79
TRS120YDR407C VMS1Q04311 632 aaKnown RBP3.88□□□□□ -1.79
TRS120YDR407C RRP6Q12149 733 aaKnown RBP3.88□□□□□ -1.79
TRS120YDR407C ATP2P00830 511 aaKnown RBP3.87□□□□□ -1.79
TRS120YDR407C MSH3P25336 1018 aa3.87□□□□□ -1.79
TRS120YDR407C CTR1P49573 406 aa3.87□□□□□ -1.79
TRS120YDR407C ARI1P53111 347 aaKnown RBP3.87□□□□□ -1.79
TRS120YDR407C TAM41P53230 385 aa3.87□□□□□ -1.79
TRS120YDR407C PHM6Q05637 104 aa3.87□□□□□ -1.79
TRS120YDR407C OPY2Q06810 360 aa3.87□□□□□ -1.79
TRS120YDR407C PFK1P16861 987 aaKnown RBP3.87□□□□□ -1.79
TRS120YDR407C ILV6P25605 309 aaKnown RBP3.87□□□□□ -1.79
TRS120YDR407C RIO2P40160 425 aaKnown RBP3.87□□□□□ -1.79
TRS120YDR407C SAE2P46946 345 aa3.87□□□□□ -1.79
TRS120YDR407C FRA1Q07825 749 aa3.87□□□□□ -1.79
TRS120YDR407C MPC54Q08550 464 aa3.87□□□□□ -1.79
TRS120YDR407C ARP6Q12509 438 aa3.87□□□□□ -1.79
TRS120YDR407C TOP1P04786 769 aa3.87□□□□□ -1.79
TRS120YDR407C ARD1P07347 238 aaPredicted RBP3.87□□□□□ -1.79
TRS120YDR407C KRS1P15180 591 aaKnown RBP3.87□□□□□ -1.79
TRS120YDR407C VMA1P17255 1071 aaKnown RBP3.87□□□□□ -1.79
TRS120YDR407C YKU70P32807 602 aa3.87□□□□□ -1.79
TRS120YDR407C HEK2P38199 381 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
TRS120YDR407C CST26P38226 397 aa3.87□□□□□ -1.79
TRS120YDR407C NPP2P39997 493 aa3.87□□□□□ -1.79
TRS120YDR407C TMA108P40462 946 aa3.87□□□□□ -1.79
TRS120YDR407C NMA2P53204 395 aa3.87□□□□□ -1.79
TRS120YDR407C YNL108CP53929 270 aa3.87□□□□□ -1.79
TRS120YDR407C YIG1Q08956 461 aa3.87□□□□□ -1.79
TRS120YDR407C GET4Q12125 312 aa3.87□□□□□ -1.79
TRS120YDR407C NBL1Q3E7Y6 73 aa3.87□□□□□ -1.79
TRS120YDR407C RAD3P06839 778 aa3.86□□□□□ -1.79
TRS120YDR407C CLN3P13365 580 aa3.86□□□□□ -1.79
TRS120YDR407C RAM2P29703 316 aa3.86□□□□□ -1.79
TRS120YDR407C RME1P32338 300 aaKnown RBP3.86□□□□□ -1.79
TRS120YDR407C GCD6P32501 712 aaKnown RBP3.86□□□□□ -1.79
TRS120YDR407C YTA12P40341 825 aa3.86□□□□□ -1.79
TRS120YDR407C PCL10P53124 433 aa3.86□□□□□ -1.79
TRS120YDR407C TOF1P53840 1238 aa3.86□□□□□ -1.79
TRS120YDR407C OSH6Q02201 448 aa3.86□□□□□ -1.79
TRS120YDR407C ECM7Q06200 448 aa3.86□□□□□ -1.79
TRS120YDR407C YOL019WQ08157 551 aa3.86□□□□□ -1.79
TRS120YDR407C SEC39Q12745 709 aa3.86□□□□□ -1.79
TRS120YDR407C YLR462WO13556 202 aa3.86□□□□□ -1.79
TRS120YDR407C TUB2P02557 457 aaKnown RBP3.86□□□□□ -1.79
TRS120YDR407C GCR1P07261 785 aa3.86□□□□□ -1.79
TRS120YDR407C PDR1P12383 1068 aa3.86□□□□□ -1.79
TRS120YDR407C CBF1P17106 351 aa3.86□□□□□ -1.79
TRS120YDR407C MDL2P33311 773 aa3.86□□□□□ -1.79
TRS120YDR407C SUL1P38359 859 aa3.86□□□□□ -1.79
TRS120YDR407C YHL049CP38722 271 aa3.86□□□□□ -1.79
TRS120YDR407C PIH1P38768 344 aa3.86□□□□□ -1.79
TRS120YDR407C UBP9P39967 754 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 99.3 ms