RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	COX3	P00420	269 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
RPO21	YDL140C	RVS161	P25343	265 aa	Known RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	MRS6	P32864	603 aa	Known RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	JNM1	P36224	373 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	RPN10	P38886	268 aa	Known RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	MAL11	P53048	616 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	PDR16	P53860	351 aa	Known RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	ISA1	Q07821	250 aa	Predicted RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	RUP1	Q12242	671 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	SFB3	P38810	929 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	YDR090C	Q03193	310 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	WAR1	Q03631	944 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	MRI1	Q06489	411 aa	Known RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	TRM11	Q12463	433 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	AI3	P03877	415 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	SRD1	P09007	221 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	RPL19A	P0CX82	189 aa	Known RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	RPL19B	P0CX83	189 aa	Predicted RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	CHS2	P14180	963 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	PMS1	P14242	873 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	MSH3	P25336	1018 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	TOA1	P32773	286 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	PTH2	P34222	208 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	LRP1	P38801	184 aa	Known RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	REV7	P38927	245 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	AIM23	P47015	356 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	DBP6	P53734	629 aa	Known RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	CWC24	P53769	259 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	HIS1	P00498	297 aa	Known RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	SPS1	P08458	490 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	CDC15	P27636	974 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	RAM2	P29703	316 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	NTH2	P35172	780 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	BCH2	P36122	765 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	BTT1	P40314	149 aa	Predicted RBP	4.04	□□□□□ -1.76
RPO21	YDL140C	INP52	P50942	1183 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	HFM1	P51979	1187 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	YNR061C	P53747	219 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	ECI1	Q05871	280 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	NSE1	Q07913	336 aa		4.04	□□□□□ -1.76
RPO21	YDL140C	MSS116	P15424	664 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	SLY1	P22213	666 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	URK1	P27515	501 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	SWC3	P31376	625 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	MSS51	P32335	436 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	GCD11	P32481	527 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	TYE7	P33122	291 aa	Predicted RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	HSP78	P33416	811 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	PTI1	P39927	425 aa	Predicted RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	UBX4	P54730	416 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	MFM1	Q02783	413 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	GIS4	Q04233	774 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	YML082W	Q04533	649 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
RPO21	YDL140C	TCP1	P12612	559 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	PRE8	P23639	250 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	RPS7A	P26786	190 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	SPT16	P32558	1035 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	RPT3	P33298	428 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
RPO21	YDL140C	SPC34	P36131	295 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	REG2	P38232	338 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	MTG2	P38860	518 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	ICP55	P40051	511 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	YLR287C	Q05881	355 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	ARG82	P07250	355 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	HOM2	P13663	365 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	VPS24	P36095	224 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	TIF4631	P39935	952 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	MKT1	P40850	830 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	IML2	P47031	731 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	MDE1	P47095	244 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	HPT1	Q04178	221 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	YOR296W	Q08748	1289 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	RAD59	Q12223	238 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	PRP16	P15938	1071 aa	Predicted RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	DUR3	P33413	735 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	HXT16	P47185	567 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	UTP8	P53276	713 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	SUR7	P54003	302 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	CTR9	P89105	1077 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	YMR265C	Q03508	461 aa	Known RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	YSH1	Q06224	779 aa	Predicted RBP	4.03	□□□□□ -1.76
RPO21	YDL140C	SFG1	Q12507	346 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	RAD61	Q99359	647 aa		4.03	□□□□□ -1.76
RPO21	YDL140C	MIS1	P09440	975 aa	Known RBP	4.02	□□□□□ -1.77
RPO21	YDL140C	OPI1	P21957	404 aa		4.02	□□□□□ -1.77
RPO21	YDL140C	AEP2	P22136	580 aa		4.02	□□□□□ -1.77
RPO21	YDL140C	RAD27	P26793	382 aa		4.02	□□□□□ -1.77
RPO21	YDL140C	YMR147W	P40218	223 aa	Known RBP	4.02	□□□□□ -1.77
RPO21	YDL140C	THI6	P41835	540 aa		4.02	□□□□□ -1.77
RPO21	YDL140C	SKP2	P42843	763 aa		4.02	□□□□□ -1.77
RPO21	YDL140C	PRP24	P49960	444 aa	Known RBP	4.02	□□□□□ -1.77
RPO21	YDL140C	NUT1	P53114	1132 aa		4.02	□□□□□ -1.77
RPO21	YDL140C	YTP1	P53584	459 aa		4.02	□□□□□ -1.77
RPO21	YDL140C	MDM1	Q01846	1127 aa		4.02	□□□□□ -1.77
RPO21	YDL140C	QCR6	P00127	147 aa		4.02	□□□□□ -1.77
RPO21	YDL140C	GID7	P25569	745 aa		4.02	□□□□□ -1.77
RPO21	YDL140C	KRE2	P27809	442 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms