RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W CSR1Q06705 408 aaKnown RBP8.43□□□□□ -1.06
NDE2YDL085W AIM7Q12156 149 aa8.43□□□□□ -1.06
NDE2YDL085W CHS2P14180 963 aa8.43□□□□□ -1.06
NDE2YDL085W DBP5P20449 482 aaKnown RBP8.43□□□□□ -1.06
NDE2YDL085W ATG19P35193 415 aa8.43□□□□□ -1.06
NDE2YDL085W DIP5P53388 608 aa8.43□□□□□ -1.06
NDE2YDL085W YAF9P53930 226 aa8.43□□□□□ -1.06
NDE2YDL085W DON1Q05610 365 aa8.43□□□□□ -1.06
NDE2YDL085W WHI4Q07655 649 aaKnown RBP8.43□□□□□ -1.06
NDE2YDL085W ARD1P07347 238 aaPredicted RBP8.42□□□□□ -1.06
NDE2YDL085W PRE10P21242 288 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
NDE2YDL085W ESS1P22696 170 aa8.42□□□□□ -1.06
NDE2YDL085W SEC21P32074 935 aaKnown RBP8.42□□□□□ -1.06
NDE2YDL085W OCT1P35999 772 aa8.42□□□□□ -1.06
NDE2YDL085W VAB2P40003 282 aa8.42□□□□□ -1.06
NDE2YDL085W VHR2P40041 505 aa8.42□□□□□ -1.06
NDE2YDL085W YJR039WP47107 1121 aa8.42□□□□□ -1.06
NDE2YDL085W TAD1P53065 400 aa8.42□□□□□ -1.06
NDE2YDL085W SPH1Q06160 661 aa8.42□□□□□ -1.06
NDE2YDL085W SIL1Q08199 421 aa8.42□□□□□ -1.06
NDE2YDL085W SDH5Q08230 162 aa8.42□□□□□ -1.06
NDE2YDL085W CSR2Q12734 1121 aa8.42□□□□□ -1.06
NDE2YDL085W TRP2P00899 507 aaKnown RBP8.41□□□□□ -1.06
NDE2YDL085W PRP16P15938 1071 aaPredicted RBP8.41□□□□□ -1.06
NDE2YDL085W CDC10P25342 322 aaKnown RBP8.41□□□□□ -1.06
NDE2YDL085W YSC83P32792 385 aa8.41□□□□□ -1.06
NDE2YDL085W TGL1P34163 548 aa8.41□□□□□ -1.06
NDE2YDL085W SQT1P35184 431 aa8.41□□□□□ -1.06
NDE2YDL085W PGM2P37012 569 aaKnown RBP8.41□□□□□ -1.06
NDE2YDL085W SLI15P38283 698 aa8.41□□□□□ -1.06
NDE2YDL085W RCK2P38623 610 aa8.41□□□□□ -1.06
NDE2YDL085W PTA1Q01329 785 aaPredicted RBP8.41□□□□□ -1.06
NDE2YDL085W SVF1Q05515 481 aa8.41□□□□□ -1.06
NDE2YDL085W ECI1Q05871 280 aa8.41□□□□□ -1.06
NDE2YDL085W PHR1P05066 565 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
NDE2YDL085W SCP160P06105 1222 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
NDE2YDL085W RPB2P08518 1224 aaKnown RBP8.4□□□□□ -1.06
NDE2YDL085W RTG2P32608 588 aaKnown RBP8.4□□□□□ -1.06
NDE2YDL085W UBP11P36026 717 aa8.4□□□□□ -1.06
NDE2YDL085W YKL023WP36103 277 aaKnown RBP8.4□□□□□ -1.06
NDE2YDL085W SAK1P38990 1142 aa8.4□□□□□ -1.06
NDE2YDL085W HMF1P40037 129 aaKnown RBP8.4□□□□□ -1.06
NDE2YDL085W ULP2P40537 1034 aaPredicted RBP8.4□□□□□ -1.06
NDE2YDL085W YNL035CP53962 389 aaKnown RBP8.4□□□□□ -1.06
NDE2YDL085W TIM8P57744 87 aa8.4□□□□□ -1.06
NDE2YDL085W UTP14Q04500 899 aaKnown RBP8.4□□□□□ -1.06
NDE2YDL085W YLR326WQ06170 240 aaKnown RBP8.4□□□□□ -1.06
NDE2YDL085W CRD1Q07560 283 aa8.4□□□□□ -1.06
NDE2YDL085W ISA1Q07821 250 aaPredicted RBP8.4□□□□□ -1.06
NDE2YDL085W KIP1P28742 1111 aa8.4□□□□□ -1.07
NDE2YDL085W SQS1P53866 767 aaKnown RBP8.4□□□□□ -1.07
NDE2YDL085W YML082WQ04533 649 aaKnown RBP8.4□□□□□ -1.07
NDE2YDL085W TMA64Q04600 565 aaKnown RBP8.4□□□□□ -1.07
NDE2YDL085W RKM4Q12504 494 aa8.4□□□□□ -1.07
NDE2YDL085W JIP3O13555 125 aa8.39□□□□□ -1.07
NDE2YDL085W ARG4P04076 463 aaPredicted RBP8.39□□□□□ -1.07
NDE2YDL085W ERG11P10614 530 aa8.39□□□□□ -1.07
NDE2YDL085W GAP1P19145 602 aaPredicted RBP8.39□□□□□ -1.07
NDE2YDL085W PSE1P32337 1089 aaKnown RBP8.39□□□□□ -1.07
NDE2YDL085W RAD54P32863 898 aa8.39□□□□□ -1.07
NDE2YDL085W MCR1P36060 302 aaKnown RBP8.39□□□□□ -1.07
NDE2YDL085W LCB2P40970 561 aa8.39□□□□□ -1.07
NDE2YDL085W YDR338CQ05497 695 aa8.39□□□□□ -1.07
NDE2YDL085W SMC5Q08204 1093 aa8.39□□□□□ -1.07
NDE2YDL085W COT1P32798 439 aa8.38□□□□□ -1.07
NDE2YDL085W LOS1P33418 1100 aaPredicted RBP8.38□□□□□ -1.07
NDE2YDL085W YEL1P34225 687 aa8.38□□□□□ -1.07
NDE2YDL085W YKL050CP35736 922 aa8.38□□□□□ -1.07
NDE2YDL085W MCD4P36051 919 aa8.38□□□□□ -1.07
NDE2YDL085W CCT2P39076 527 aaKnown RBP8.38□□□□□ -1.07
NDE2YDL085W MRX1P40050 688 aa8.38□□□□□ -1.07
NDE2YDL085W ERV41Q04651 352 aa8.38□□□□□ -1.07
NDE2YDL085W CDC33P07260 213 aaKnown RBP8.37□□□□□ -1.07
NDE2YDL085W SAM1P10659 382 aaKnown RBP8.37□□□□□ -1.07
NDE2YDL085W PMR1P13586 950 aa8.37□□□□□ -1.07
NDE2YDL085W SWE1P32944 819 aa8.37□□□□□ -1.07
NDE2YDL085W SWH1P35845 1188 aa8.37□□□□□ -1.07
NDE2YDL085W OAF3P36023 863 aa8.37□□□□□ -1.07
NDE2YDL085W YNL320WP42840 284 aa8.37□□□□□ -1.07
NDE2YDL085W SHE10P53075 577 aa8.37□□□□□ -1.07
NDE2YDL085W ARK1P53974 638 aa8.37□□□□□ -1.07
NDE2YDL085W RPL22BP56628 122 aaKnown RBP8.37□□□□□ -1.07
NDE2YDL085W DIG1Q03063 452 aaKnown RBP8.37□□□□□ -1.07
NDE2YDL085W PUF3Q07807 879 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
NDE2YDL085W SPO21Q12411 609 aa8.37□□□□□ -1.07
NDE2YDL085W CDC19P00549 500 aaKnown RBP8.36□□□□□ -1.07
NDE2YDL085W SPT5P27692 1063 aaKnown RBP8.36□□□□□ -1.07
NDE2YDL085W GPB2P39717 880 aa8.36□□□□□ -1.07
NDE2YDL085W YML119WQ03208 357 aa8.36□□□□□ -1.07
NDE2YDL085W UBX5Q06682 500 aa8.36□□□□□ -1.07
NDE2YDL085W AIM41Q12032 185 aa8.36□□□□□ -1.07
NDE2YDL085W OSW2Q12202 724 aa8.36□□□□□ -1.07
NDE2YDL085W HIF1Q12373 385 aa8.36□□□□□ -1.07
NDE2YDL085W YLR462WO13556 202 aa8.36□□□□□ -1.07
NDE2YDL085W FBP1P09201 348 aa8.36□□□□□ -1.07
NDE2YDL085W VMA1P17255 1071 aaKnown RBP8.36□□□□□ -1.07
NDE2YDL085W NAM7P30771 971 aaKnown RBP8.36□□□□□ -1.07
NDE2YDL085W MUD1P32605 298 aaKnown RBP8.36□□□□□ -1.07
NDE2YDL085W BCH2P36122 765 aa8.36□□□□□ -1.07
NDE2YDL085W TVP38P36164 337 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms