RNA–Protein interactions for RNA: YDL051W

LHP1, RNA binding protein required for maturation of tRNA and U6 snRNA, yeast

Gene LHP1, Length 828 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LHP1	YDL051W	YGR273C	P53329	174 aa		5.08	□□□□□ -1.6
LHP1	YDL051W	RPL22B	P56628	122 aa	Known RBP	5.08	□□□□□ -1.6
LHP1	YDL051W	UTP6	Q02354	440 aa	Known RBP	5.08	□□□□□ -1.6
LHP1	YDL051W	PRP42	Q03776	544 aa	Known RBP	5.08	□□□□□ -1.6
LHP1	YDL051W	FRA1	Q07825	749 aa		5.08	□□□□□ -1.6
LHP1	YDL051W	YPL216W	Q08964	1102 aa		5.08	□□□□□ -1.6
LHP1	YDL051W	PCL8	Q08966	492 aa		5.08	□□□□□ -1.6
LHP1	YDL051W	AIM7	Q12156	149 aa		5.08	□□□□□ -1.6
LHP1	YDL051W	UTP10	P42945	1769 aa	Known RBP	5.07	□□□□□ -1.6
LHP1	YDL051W	PMR1	P13586	950 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	GAL11	P19659	1081 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	MRPS28	P21771	286 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	KIP2	P28743	706 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	SEC21	P32074	935 aa	Known RBP	5.07	□□□□□ -1.6
LHP1	YDL051W	TOA1	P32773	286 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	TFC3	P34111	1160 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
LHP1	YDL051W	ECM2	P38241	364 aa	Known RBP	5.07	□□□□□ -1.6
LHP1	YDL051W	YHL050C	P38721	697 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	SPL2	P38839	148 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	TIF4631	P39935	952 aa	Known RBP	5.07	□□□□□ -1.6
LHP1	YDL051W	SDS3	P40505	327 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	SNU71	P53207	620 aa	Known RBP	5.07	□□□□□ -1.6
LHP1	YDL051W	YNL144C	P53907	740 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	SEN54	Q02825	467 aa	Predicted RBP	5.07	□□□□□ -1.6
LHP1	YDL051W	VPS72	Q03388	795 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	MSH6	Q03834	1242 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	UTP14	Q04500	899 aa	Known RBP	5.07	□□□□□ -1.6
LHP1	YDL051W	DPL1	Q05567	589 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	YLR297W	Q05899	129 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
LHP1	YDL051W	GRX6	Q12438	231 aa		5.07	□□□□□ -1.6
LHP1	YDL051W	YLR462W	O13556	202 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	ILV1	P00927	576 aa	Known RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	ARG4	P04076	463 aa	Predicted RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	PCK1	P10963	549 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	PFK1	P16861	987 aa	Known RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	ISY1	P21374	235 aa	Predicted RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	SDH2	P21801	266 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	PRO3	P32263	286 aa	Known RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	GLC3	P32775	704 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	PGM1	P33401	570 aa	Known RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	SEG2	P34250	1132 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	MCD4	P36051	919 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	YKR018C	P36114	725 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	CCL1	P37366	393 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	PFF1	P38244	976 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	TPS3	P38426	1054 aa	Known RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	ERG7	P38604	731 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	RCK2	P38623	610 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	YHL049C	P38722	271 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	SET5	P38890	526 aa	Known RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	YEL075C	P39972	122 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	RPN3	P40016	523 aa	Known RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	MRX1	P40050	688 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	YER189W	P40104	122 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	MMM1	P41800	426 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	YFL064C	P43540	174 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	CIT3	P43635	486 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	VPS53	P47061	822 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	GUP1	P53154	560 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	MDR1	P53258	950 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	ATF2	P53296	535 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	NCS2	P53923	493 aa	Predicted RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	ADA2	Q02336	434 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	OYE2	Q03558	400 aa	Known RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	SVF1	Q05515	481 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	CMS1	Q07897	291 aa	Known RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	MDM38	Q08179	573 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	NOB1	Q08444	459 aa	Known RBP	5.06	□□□□□ -1.6
LHP1	YDL051W	YPL277C	Q08989	487 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	NCA2	Q12374	616 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	SPO21	Q12411	609 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	YBL111C	Q3E7Y5	667 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	YRF1-3	P0CX14	1859 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	YRF1-7	P0CX15	1859 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	YRF1-6	P53819	1859 aa		5.06	□□□□□ -1.6
LHP1	YDL051W	COX6	P00427	148 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
LHP1	YDL051W	RAD3	P06839	778 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	SNF3	P10870	884 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	PHO8	P11491	566 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	CHS2	P14180	963 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	PRP4	P20053	465 aa	Known RBP	5.05	□□□□□ -1.6
LHP1	YDL051W	ARG1	P22768	420 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	SEC14	P24280	304 aa	Known RBP	5.05	□□□□□ -1.6
LHP1	YDL051W	CLB4	P24871	460 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	HEM3	P28789	327 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	DBF4	P32325	704 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	PDB1	P32473	366 aa	Known RBP	5.05	□□□□□ -1.6
LHP1	YDL051W	ATG19	P35193	415 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	YKL050C	P35736	922 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	TRZ1	P36159	838 aa	Predicted RBP	5.05	□□□□□ -1.6
LHP1	YDL051W	CST26	P38226	397 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	KAP123	P40069	1113 aa	Known RBP	5.05	□□□□□ -1.6
LHP1	YDL051W	SEC26	P41810	973 aa	Known RBP	5.05	□□□□□ -1.6
LHP1	YDL051W	GSM1	P42950	618 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	BRO1	P48582	844 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	PGA2	P53903	129 aa		5.05	□□□□□ -1.6
LHP1	YDL051W	ESBP6	P53918	673 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms