RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C YBL111CQ3E7Y5 667 aa5.26□□□□□ -1.57
ROT2YBR229C PMA1P05030 918 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C RAD54P32863 898 aa5.26□□□□□ -1.57
ROT2YBR229C YKL023WP36103 277 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C SMX2P40204 77 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C LCB2P40970 561 aa5.26□□□□□ -1.57
ROT2YBR229C NCS2P53923 493 aaPredicted RBP5.26□□□□□ -1.57
ROT2YBR229C MTG1Q03151 367 aaPredicted RBP5.26□□□□□ -1.57
ROT2YBR229C USA1Q03714 838 aa5.26□□□□□ -1.57
ROT2YBR229C WHI4Q07655 649 aaKnown RBP5.26□□□□□ -1.57
ROT2YBR229C TAF10Q12030 206 aa5.26□□□□□ -1.57
ROT2YBR229C DIP2Q12220 943 aaPredicted RBP5.26□□□□□ -1.57
ROT2YBR229C CLN3P13365 580 aa5.25□□□□□ -1.57
ROT2YBR229C ILV6P25605 309 aaKnown RBP5.25□□□□□ -1.57
ROT2YBR229C ICL1P28240 557 aaPredicted RBP5.25□□□□□ -1.57
ROT2YBR229C PLC1P32383 869 aa5.25□□□□□ -1.57
ROT2YBR229C EUG1P32474 517 aa5.25□□□□□ -1.57
ROT2YBR229C SUV3P32580 737 aa5.25□□□□□ -1.57
ROT2YBR229C SPC72P39723 622 aa5.25□□□□□ -1.57
ROT2YBR229C ALD6P54115 500 aaKnown RBP5.25□□□□□ -1.57
ROT2YBR229C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
ROT2YBR229C CRF1Q04930 467 aa5.25□□□□□ -1.57
ROT2YBR229C FRA1Q07825 749 aa5.25□□□□□ -1.57
ROT2YBR229C HIF1Q12373 385 aa5.25□□□□□ -1.57
ROT2YBR229C NCA2Q12374 616 aa5.25□□□□□ -1.57
ROT2YBR229C SEY1Q99287 776 aa5.25□□□□□ -1.57
ROT2YBR229C PEP5P12868 1029 aa5.25□□□□□ -1.57
ROT2YBR229C KIP1P28742 1111 aa5.25□□□□□ -1.57
ROT2YBR229C TRZ1P36159 838 aaPredicted RBP5.25□□□□□ -1.57
ROT2YBR229C ULP2P40537 1034 aaPredicted RBP5.25□□□□□ -1.57
ROT2YBR229C NMD5P46970 1048 aa5.25□□□□□ -1.57
ROT2YBR229C VPS4P52917 437 aa5.25□□□□□ -1.57
ROT2YBR229C KIN4Q01919 800 aa5.25□□□□□ -1.57
ROT2YBR229C DON1Q05610 365 aa5.25□□□□□ -1.57
ROT2YBR229C TUB2P02557 457 aaKnown RBP5.24□□□□□ -1.57
ROT2YBR229C CTT1P06115 562 aa5.24□□□□□ -1.57
ROT2YBR229C SUP45P12385 437 aaKnown RBP5.24□□□□□ -1.57
ROT2YBR229C NIP1P32497 812 aaKnown RBP5.24□□□□□ -1.57
ROT2YBR229C UBP13P38187 747 aa5.24□□□□□ -1.57
ROT2YBR229C URB2P47108 1174 aa5.24□□□□□ -1.57
ROT2YBR229C DIP5P53388 608 aa5.24□□□□□ -1.57
ROT2YBR229C ARK1P53974 638 aa5.24□□□□□ -1.57
ROT2YBR229C TIM8P57744 87 aa5.24□□□□□ -1.57
ROT2YBR229C ADA2Q02336 434 aa5.24□□□□□ -1.57
ROT2YBR229C UTP6Q02354 440 aaKnown RBP5.24□□□□□ -1.57
ROT2YBR229C YML082WQ04533 649 aaKnown RBP5.24□□□□□ -1.57
ROT2YBR229C PHM6Q05637 104 aa5.24□□□□□ -1.57
ROT2YBR229C ERG12P07277 443 aa5.24□□□□□ -1.57
ROT2YBR229C TCP1P12612 559 aaKnown RBP5.24□□□□□ -1.57
ROT2YBR229C ESS1P22696 170 aa5.24□□□□□ -1.57
ROT2YBR229C PSE1P32337 1089 aaKnown RBP5.24□□□□□ -1.57
ROT2YBR229C PDB1P32473 366 aaKnown RBP5.24□□□□□ -1.57
ROT2YBR229C YSC83P32792 385 aa5.24□□□□□ -1.57
ROT2YBR229C UBP11P36026 717 aa5.24□□□□□ -1.57
ROT2YBR229C RRT2P38332 387 aa5.24□□□□□ -1.57
ROT2YBR229C HIS2P38635 335 aa5.24□□□□□ -1.57
ROT2YBR229C INA22P40576 216 aa5.24□□□□□ -1.57
ROT2YBR229C YMR1P47147 688 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
ROT2YBR229C BRO1P48582 844 aa5.24□□□□□ -1.57
ROT2YBR229C PNP1Q05788 311 aa5.24□□□□□ -1.57
ROT2YBR229C NOB1Q08444 459 aaKnown RBP5.24□□□□□ -1.57
ROT2YBR229C YDL206WQ12424 762 aa5.24□□□□□ -1.57
ROT2YBR229C PHR1P05066 565 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
ROT2YBR229C RPS9BP05755 195 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C CHS2P14180 963 aa5.23□□□□□ -1.57
ROT2YBR229C CAP1P28495 268 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C TFC4P33339 1025 aa5.23□□□□□ -1.57
ROT2YBR229C ECM2P38241 364 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C TIF5P38431 405 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C RPN3P40016 523 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C FIS1P40515 155 aa5.23□□□□□ -1.57
ROT2YBR229C VPS70P47161 811 aa5.23□□□□□ -1.57
ROT2YBR229C RKM4Q12504 494 aa5.23□□□□□ -1.57
ROT2YBR229C PGK1P00560 416 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C RNA1P11745 407 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C GAL11P19659 1081 aa5.23□□□□□ -1.57
ROT2YBR229C EXO5P38289 585 aa5.23□□□□□ -1.57
ROT2YBR229C KEL1P38853 1164 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C SHC1P39000 512 aa5.23□□□□□ -1.57
ROT2YBR229C END3P39013 349 aa5.23□□□□□ -1.57
ROT2YBR229C VHR2P40041 505 aa5.23□□□□□ -1.57
ROT2YBR229C KAP123P40069 1113 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C LIF1P53150 421 aa5.23□□□□□ -1.57
ROT2YBR229C CPR6P53691 371 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C ATG16Q03818 150 aa5.23□□□□□ -1.57
ROT2YBR229C TAF9Q05027 157 aa5.23□□□□□ -1.57
ROT2YBR229C YLR326WQ06170 240 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
ROT2YBR229C CMS1Q07897 291 aaKnown RBP5.23□□□□□ -1.57
ROT2YBR229C ARG1P22768 420 aa5.22□□□□□ -1.57
ROT2YBR229C GCD6P32501 712 aaKnown RBP5.22□□□□□ -1.57
ROT2YBR229C RPC37P36121 282 aa5.22□□□□□ -1.57
ROT2YBR229C HEK2P38199 381 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57 RIP-Chip
ROT2YBR229C GUD1Q07729 489 aa5.22□□□□□ -1.57
ROT2YBR229C SRV2P17555 526 aaKnown RBP5.22□□□□□ -1.57
ROT2YBR229C SWH1P35845 1188 aa5.22□□□□□ -1.57
ROT2YBR229C RIO2P40160 425 aaKnown RBP5.22□□□□□ -1.57
ROT2YBR229C YTA12P40341 825 aa5.22□□□□□ -1.57
ROT2YBR229C ZPR1P53303 486 aaKnown RBP5.22□□□□□ -1.57
ROT2YBR229C SUB1P54000 292 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms