RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ZBTB3Q9H5J0 574 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 TSPYL4Q9UJ04 414 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 HACL1Q9UJ83 578 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 UBN2Q6ZU65 1347 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 ZNF541Q9H0D2 1346 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 GPTP24298 496 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 SUSD4Q5VX71 490 aa16.5■□□□□ 0.23
CTSD-208ENST00000636843 HSPA1AP0DMV8 641 aaKnown RBP16.49■□□□□ 0.23
CTSD-208ENST00000636843 HSPA1BP0DMV9 641 aaKnown RBP16.49■□□□□ 0.23
CTSD-208ENST00000636843 RIPK4P57078 832 aa16.49■□□□□ 0.23
CTSD-208ENST00000636843 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
CTSD-208ENST00000636843 PPP1R42Q7Z4L9 355 aa16.49■□□□□ 0.23
CTSD-208ENST00000636843 JDP2Q8WYK2 163 aa16.49■□□□□ 0.23
CTSD-208ENST00000636843 SCN4AP35499 1836 aa16.48■□□□□ 0.23
CTSD-208ENST00000636843 LMOD3Q0VAK6 560 aa16.48■□□□□ 0.23
CTSD-208ENST00000636843 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
CTSD-208ENST00000636843 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
CTSD-208ENST00000636843 NUP98P52948 1817 aa16.48■□□□□ 0.23
CTSD-208ENST00000636843 SNED1Q8TER0 1413 aa16.47■□□□□ 0.23
CTSD-208ENST00000636843 NTSR2O95665 410 aa16.47■□□□□ 0.23
CTSD-208ENST00000636843 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
CTSD-208ENST00000636843 PNMA8AQ86V59 439 aaPredicted RBP16.47■□□□□ 0.23
CTSD-208ENST00000636843 GPC2Q8N158 579 aa16.47■□□□□ 0.23
CTSD-208ENST00000636843 PASKQ96RG2 1323 aa16.47■□□□□ 0.23
CTSD-208ENST00000636843 EPHX2P34913 555 aa16.46■□□□□ 0.23
CTSD-208ENST00000636843 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
CTSD-208ENST00000636843 PDIA6Q15084 440 aa16.46■□□□□ 0.23
CTSD-208ENST00000636843 LRP10Q7Z4F1 713 aa16.46■□□□□ 0.23
CTSD-208ENST00000636843 PCNTO95613 3336 aa16.46■□□□□ 0.23
CTSD-208ENST00000636843 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
CTSD-208ENST00000636843 EIF6P56537 245 aaKnown RBP16.45■□□□□ 0.22
CTSD-208ENST00000636843 NLRP3Q96P20 1036 aa16.45■□□□□ 0.22
CTSD-208ENST00000636843 MKRN1Q9UHC7 482 aaKnown RBP16.45■□□□□ 0.22
CTSD-208ENST00000636843 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
CTSD-208ENST00000636843 ITGBL1O95965 494 aaPredicted RBP16.45■□□□□ 0.22
CTSD-208ENST00000636843 TNS4Q8IZW8 715 aa16.45■□□□□ 0.22
CTSD-208ENST00000636843 UTP14AQ9BVJ6 771 aaKnown RBP16.45■□□□□ 0.22
CTSD-208ENST00000636843 RNF123Q5XPI4 1314 aa16.44■□□□□ 0.22
CTSD-208ENST00000636843 TMEM88BA6NKF7 163 aa16.44■□□□□ 0.22
CTSD-208ENST00000636843 PPEF1O14829 653 aaPredicted RBP16.44■□□□□ 0.22
CTSD-208ENST00000636843 SLC10A5Q5PT55 438 aa16.44■□□□□ 0.22
CTSD-208ENST00000636843 TMX4Q9H1E5 349 aaPredicted RBP16.44■□□□□ 0.22
CTSD-208ENST00000636843 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
CTSD-208ENST00000636843 HSP90AB3PQ58FF7 597 aa16.43■□□□□ 0.22
CTSD-208ENST00000636843 C3orf67Q6ZVT6 689 aa16.43■□□□□ 0.22
CTSD-208ENST00000636843 LARGE2Q8N3Y3 721 aa16.43■□□□□ 0.22
CTSD-208ENST00000636843 MRS2Q9HD23 443 aa16.43■□□□□ 0.22
CTSD-208ENST00000636843 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
CTSD-208ENST00000636843 VPS33BQ9H267 617 aa16.42■□□□□ 0.22
CTSD-208ENST00000636843 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
CTSD-208ENST00000636843 ANXA1P04083 346 aa16.41■□□□□ 0.22
CTSD-208ENST00000636843 LMOD1P29536 600 aaPredicted RBP16.41■□□□□ 0.22
CTSD-208ENST00000636843 COPS6Q7L5N1 327 aa16.41■□□□□ 0.22
CTSD-208ENST00000636843 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
CTSD-208ENST00000636843 GJA3Q9Y6H8 435 aa16.41■□□□□ 0.22
CTSD-208ENST00000636843 TCERG1O14776 1098 aaKnown RBP16.4■□□□□ 0.22
CTSD-208ENST00000636843 NIM1KQ8IY84 436 aa16.4■□□□□ 0.22
CTSD-208ENST00000636843 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
CTSD-208ENST00000636843 CHL1O00533 1208 aa16.4■□□□□ 0.22
CTSD-208ENST00000636843 MAP1SQ66K74 1059 aaPredicted RBP16.4■□□□□ 0.22
CTSD-208ENST00000636843 XAGE3Q8WTP9 111 aa16.4■□□□□ 0.22
CTSD-208ENST00000636843 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
CTSD-208ENST00000636843 ADAMTSL1Q8N6G6 1762 aa16.39■□□□□ 0.21
CTSD-208ENST00000636843 COL4A5P29400 1685 aa16.39■□□□□ 0.21
CTSD-208ENST00000636843 BBOX1O75936 387 aa16.39■□□□□ 0.21
CTSD-208ENST00000636843 VEGFBP49765 207 aa16.39■□□□□ 0.21
CTSD-208ENST00000636843 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTSD-208ENST00000636843 AIMP1Q12904 312 aaKnown RBP16.39■□□□□ 0.21
CTSD-208ENST00000636843 TCIRG1Q13488 830 aa16.39■□□□□ 0.21
CTSD-208ENST00000636843 CCDC184Q52MB2 194 aa16.39■□□□□ 0.21
CTSD-208ENST00000636843 NLRP10Q86W26 655 aa16.39■□□□□ 0.21
CTSD-208ENST00000636843 SUPT20HQ8NEM7 779 aa16.39■□□□□ 0.21
CTSD-208ENST00000636843 NECTIN2Q92692 538 aa16.39■□□□□ 0.21
CTSD-208ENST00000636843 RUNDC1Q96C34 613 aa16.39■□□□□ 0.21
CTSD-208ENST00000636843 ABCC4O15439 1325 aa16.38■□□□□ 0.21
CTSD-208ENST00000636843 PPIP5K2O43314 1243 aa16.38■□□□□ 0.21
CTSD-208ENST00000636843 SCNN1DP51172 638 aa16.38■□□□□ 0.21
CTSD-208ENST00000636843 NEUROD2Q15784 382 aa16.38■□□□□ 0.21
CTSD-208ENST00000636843 CCDC146Q8IYE0 955 aa16.38■□□□□ 0.21
CTSD-208ENST00000636843 EPS15P42566 896 aa16.37■□□□□ 0.21
CTSD-208ENST00000636843 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
CTSD-208ENST00000636843 USP50Q70EL3 339 aaPredicted RBP16.37■□□□□ 0.21
CTSD-208ENST00000636843 SLC51AQ86UW1 340 aa16.37■□□□□ 0.21
CTSD-208ENST00000636843 SP8Q8IXZ3 490 aa16.37■□□□□ 0.21
CTSD-208ENST00000636843 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
CTSD-208ENST00000636843 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
CTSD-208ENST00000636843 SH3TC1Q8TE82 1336 aa16.36■□□□□ 0.21
CTSD-208ENST00000636843 RASSF10A6NK89 507 aa16.36■□□□□ 0.21
CTSD-208ENST00000636843 HOXB7P09629 217 aa16.36■□□□□ 0.21
CTSD-208ENST00000636843 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
CTSD-208ENST00000636843 AOC3Q16853 763 aa16.36■□□□□ 0.21
CTSD-208ENST00000636843 DDX46Q7L014 1031 aaKnown RBP16.36■□□□□ 0.21
CTSD-208ENST00000636843 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
CTSD-208ENST00000636843 FOXN1O15353 648 aa16.35■□□□□ 0.21
CTSD-208ENST00000636843 CAPN15O75808 1086 aa16.35■□□□□ 0.21
CTSD-208ENST00000636843 KRT24Q2M2I5 525 aa16.35■□□□□ 0.21
CTSD-208ENST00000636843 DEFB115Q30KQ5 88 aa16.35■□□□□ 0.21
CTSD-208ENST00000636843 DPP8Q6V1X1 898 aaPredicted RBP16.35■□□□□ 0.21
CTSD-208ENST00000636843 AIDAQ96BJ3 306 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms