RNA–Protein interactions for RNA: ENST00000596756.5

IRF3-212, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-212ENST00000596756 ZNF541Q9H0D2 1346 aa17.86■□□□□ 0.45
IRF3-212ENST00000596756 IQCA1LA6NCM1 817 aa17.85■□□□□ 0.45
IRF3-212ENST00000596756 FZD9O00144 591 aa17.85■□□□□ 0.45
IRF3-212ENST00000596756 NTSR2O95665 410 aa17.85■□□□□ 0.45
IRF3-212ENST00000596756 NUP98P52948 1817 aa17.85■□□□□ 0.45
IRF3-212ENST00000596756 MYBBP1AQ9BQG0 1328 aaKnown RBP17.85■□□□□ 0.45
IRF3-212ENST00000596756 ADAMTSL1Q8N6G6 1762 aa17.84■□□□□ 0.45
IRF3-212ENST00000596756 IARSP41252 1262 aaKnown RBP17.84■□□□□ 0.45
IRF3-212ENST00000596756 LMOD3Q0VAK6 560 aa17.84■□□□□ 0.45
IRF3-212ENST00000596756 DDX10Q13206 875 aaKnown RBP17.84■□□□□ 0.45
IRF3-212ENST00000596756 PROSER3Q2NL68 480 aa17.84■□□□□ 0.45
IRF3-212ENST00000596756 SYNE4Q8N205 404 aa17.84■□□□□ 0.45
IRF3-212ENST00000596756 PSMD1Q99460 953 aa17.84■□□□□ 0.45
IRF3-212ENST00000596756 MKRN1Q9UHC7 482 aaKnown RBP17.84■□□□□ 0.45
IRF3-212ENST00000596756 CNTNAP1P78357 1384 aa17.83■□□□□ 0.45
IRF3-212ENST00000596756 EIF2S2P20042 333 aaKnown RBP17.83■□□□□ 0.44
IRF3-212ENST00000596756 CC2D2BQ6DHV5 1058 aa17.83■□□□□ 0.44
IRF3-212ENST00000596756 PARP10Q53GL7 1025 aa17.82■□□□□ 0.44
IRF3-212ENST00000596756 C3orf67Q6ZVT6 689 aa17.82■□□□□ 0.44
IRF3-212ENST00000596756 RPGRQ92834 1020 aaKnown RBP17.82■□□□□ 0.44
IRF3-212ENST00000596756 CRAMP1Q96RY5 1269 aa17.82■□□□□ 0.44
IRF3-212ENST00000596756 ANXA1P04083 346 aa17.81■□□□□ 0.44
IRF3-212ENST00000596756 PPP1R42Q7Z4L9 355 aa17.81■□□□□ 0.44
IRF3-212ENST00000596756 CCDC146Q8IYE0 955 aa17.81■□□□□ 0.44
IRF3-212ENST00000596756 CHL1O00533 1208 aa17.8■□□□□ 0.44
IRF3-212ENST00000596756 CAPN15O75808 1086 aa17.8■□□□□ 0.44
IRF3-212ENST00000596756 SLC10A5Q5PT55 438 aa17.8■□□□□ 0.44
IRF3-212ENST00000596756 SLC51AQ86UW1 340 aa17.8■□□□□ 0.44
IRF3-212ENST00000596756 RBM17Q96I25 401 aaKnown RBP17.8■□□□□ 0.44
IRF3-212ENST00000596756 HACL1Q9UJ83 578 aa17.8■□□□□ 0.44
IRF3-212ENST00000596756 TRIM35Q9UPQ4 493 aa17.8■□□□□ 0.44
IRF3-212ENST00000596756 COL4A5P29400 1685 aa17.8■□□□□ 0.44
IRF3-212ENST00000596756 EPHX2P34913 555 aa17.79■□□□□ 0.44
IRF3-212ENST00000596756 GRIPAP1Q4V328 841 aa17.79■□□□□ 0.44
IRF3-212ENST00000596756 RUNDC1Q96C34 613 aa17.79■□□□□ 0.44
IRF3-212ENST00000596756 UTP14AQ9BVJ6 771 aaKnown RBP17.79■□□□□ 0.44
IRF3-212ENST00000596756 TMEM88BA6NKF7 163 aa17.78■□□□□ 0.44
IRF3-212ENST00000596756 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
IRF3-212ENST00000596756 FOXN1O15353 648 aa17.78■□□□□ 0.44
IRF3-212ENST00000596756 VEGFBP49765 207 aa17.78■□□□□ 0.44
IRF3-212ENST00000596756 NEUROD2Q15784 382 aa17.78■□□□□ 0.44
IRF3-212ENST00000596756 KRT24Q2M2I5 525 aa17.78■□□□□ 0.44
IRF3-212ENST00000596756 COPS6Q7L5N1 327 aa17.78■□□□□ 0.44
IRF3-212ENST00000596756 GPC2Q8N158 579 aa17.78■□□□□ 0.44
IRF3-212ENST00000596756 RNF123Q5XPI4 1314 aa17.77■□□□□ 0.44
IRF3-212ENST00000596756 XAGE3Q8WTP9 111 aa17.77■□□□□ 0.44
IRF3-212ENST00000596756 JDP2Q8WYK2 163 aa17.77■□□□□ 0.44
IRF3-212ENST00000596756 NECTIN2Q92692 538 aa17.77■□□□□ 0.44
IRF3-212ENST00000596756 NLRP3Q96P20 1036 aa17.77■□□□□ 0.44
IRF3-212ENST00000596756 DDX21Q9NR30 783 aaKnown RBP eCLIP17.77■□□□□ 0.44
IRF3-212ENST00000596756 EAPPQ56P03 285 aaPredicted RBP17.76■□□□□ 0.43
IRF3-212ENST00000596756 HSP90AB3PQ58FF7 597 aa17.76■□□□□ 0.43
IRF3-212ENST00000596756 PNMA8AQ86V59 439 aaPredicted RBP17.76■□□□□ 0.43
IRF3-212ENST00000596756 NLRP10Q86W26 655 aa17.76■□□□□ 0.43
IRF3-212ENST00000596756 CNTROBQ8N137 903 aa17.76■□□□□ 0.43
IRF3-212ENST00000596756 PRDM10Q9NQV6 1147 aa17.76■□□□□ 0.43
IRF3-212ENST00000596756 ADAMTS8Q9UP79 889 aa17.76■□□□□ 0.43
IRF3-212ENST00000596756 AIMP1Q12904 312 aaKnown RBP17.75■□□□□ 0.43
IRF3-212ENST00000596756 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
IRF3-212ENST00000596756 WBP1LQ9NX94 342 aa17.75■□□□□ 0.43
IRF3-212ENST00000596756 ATP6V0A2Q9Y487 856 aa17.75■□□□□ 0.43
IRF3-212ENST00000596756 LTBP1Q14766 1721 aa17.75■□□□□ 0.43
IRF3-212ENST00000596756 ABCC4O15439 1325 aa17.74■□□□□ 0.43
IRF3-212ENST00000596756 RASSF10A6NK89 507 aa17.74■□□□□ 0.43
IRF3-212ENST00000596756 TCERG1O14776 1098 aaKnown RBP17.74■□□□□ 0.43
IRF3-212ENST00000596756 TCIRG1Q13488 830 aa17.74■□□□□ 0.43
IRF3-212ENST00000596756 MAP1SQ66K74 1059 aaPredicted RBP17.74■□□□□ 0.43
IRF3-212ENST00000596756 LARGE2Q8N3Y3 721 aa17.74■□□□□ 0.43
IRF3-212ENST00000596756 CHPF2Q9P2E5 772 aa17.74■□□□□ 0.43
IRF3-212ENST00000596756 CLEC11AQ9Y240 323 aa17.74■□□□□ 0.43
IRF3-212ENST00000596756 HOXB7P09629 217 aa17.73■□□□□ 0.43
IRF3-212ENST00000596756 EIF6P56537 245 aaKnown RBP17.73■□□□□ 0.43
IRF3-212ENST00000596756 LAS1LQ9Y4W2 734 aaKnown RBP17.73■□□□□ 0.43
IRF3-212ENST00000596756 ANKRD36CQ5JPF3 1778 aa17.72■□□□□ 0.43
IRF3-212ENST00000596756 HCLS1P14317 486 aaPredicted RBP17.72■□□□□ 0.43
IRF3-212ENST00000596756 SCNN1DP51172 638 aa17.72■□□□□ 0.43
IRF3-212ENST00000596756 PRKRIP1Q9H875 184 aaPredicted RBP17.72■□□□□ 0.43
IRF3-212ENST00000596756 GJA3Q9Y6H8 435 aa17.72■□□□□ 0.43
IRF3-212ENST00000596756 CTCFP49711 727 aaPredicted RBP17.71■□□□□ 0.43
IRF3-212ENST00000596756 HDGFL1Q5TGJ6 251 aa17.71■□□□□ 0.43
IRF3-212ENST00000596756 CFAP44Q96MT7 982 aa17.71■□□□□ 0.43
IRF3-212ENST00000596756 RTFDC1Q9BY42 306 aaPredicted RBP17.71■□□□□ 0.43
IRF3-212ENST00000596756 VPS33BQ9H267 617 aa17.71■□□□□ 0.43
IRF3-212ENST00000596756 TRMT112Q9UI30 125 aaKnown RBP17.71■□□□□ 0.43
IRF3-212ENST00000596756 SH3TC1Q8TE82 1336 aa17.71■□□□□ 0.42
IRF3-212ENST00000596756 PPIP5K2O43314 1243 aa17.7■□□□□ 0.42
IRF3-212ENST00000596756 BBOX1O75936 387 aa17.7■□□□□ 0.42
IRF3-212ENST00000596756 EPS15P42566 896 aa17.7■□□□□ 0.42
IRF3-212ENST00000596756 AOC3Q16853 763 aa17.7■□□□□ 0.42
IRF3-212ENST00000596756 DEFB115Q30KQ5 88 aa17.7■□□□□ 0.42
IRF3-212ENST00000596756 NIM1KQ8IY84 436 aa17.7■□□□□ 0.42
IRF3-212ENST00000596756 PLBD2Q8NHP8 589 aa17.7■□□□□ 0.42
IRF3-212ENST00000596756 TMX4Q9H1E5 349 aaPredicted RBP17.7■□□□□ 0.42
IRF3-212ENST00000596756 DBF4Q9UBU7 674 aaPredicted RBP17.7■□□□□ 0.42
IRF3-212ENST00000596756 SP8Q8IXZ3 490 aa17.69■□□□□ 0.42
IRF3-212ENST00000596756 ISCA1Q9BUE6 129 aa17.69■□□□□ 0.42
IRF3-212ENST00000596756 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
IRF3-212ENST00000596756 LMOD1P29536 600 aaPredicted RBP17.68■□□□□ 0.42
IRF3-212ENST00000596756 FMR1Q06787 632 aaKnown RBP eCLIP17.68■□□□□ 0.42
IRF3-212ENST00000596756 GRAPQ13588 217 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms