RNA–Protein interactions for RNA: ENST00000588826.2

RAD23A-205, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5

Gene RAD23A, Length 832 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-205ENST00000588826 ZNF34Q8IZ26 560 aa17.24■□□□□ 0.35
RAD23A-205ENST00000588826 JDP2Q8WYK2 163 aa17.24■□□□□ 0.35
RAD23A-205ENST00000588826 TAF1DQ9H5J8 278 aaPredicted RBP17.24■□□□□ 0.35
RAD23A-205ENST00000588826 CREBZFQ9NS37 354 aa17.24■□□□□ 0.35
RAD23A-205ENST00000588826 BABAM1Q9NWV8 329 aa17.24■□□□□ 0.35
RAD23A-205ENST00000588826 ADAMTSL1Q8N6G6 1762 aa17.23■□□□□ 0.35
RAD23A-205ENST00000588826 NTSR2O95665 410 aa17.23■□□□□ 0.35
RAD23A-205ENST00000588826 HOXA10P31260 410 aaPredicted RBP17.23■□□□□ 0.35
RAD23A-205ENST00000588826 TMPOP42166 694 aaKnown RBP17.23■□□□□ 0.35
RAD23A-205ENST00000588826 EAPPQ56P03 285 aaPredicted RBP17.23■□□□□ 0.35
RAD23A-205ENST00000588826 RBM17Q96I25 401 aaKnown RBP17.23■□□□□ 0.35
RAD23A-205ENST00000588826 HACL1Q9UJ83 578 aa17.23■□□□□ 0.35
RAD23A-205ENST00000588826 MYBBP1AQ9BQG0 1328 aaKnown RBP17.22■□□□□ 0.35
RAD23A-205ENST00000588826 GRIPAP1Q4V328 841 aa17.22■□□□□ 0.35
RAD23A-205ENST00000588826 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.35
RAD23A-205ENST00000588826 FZD9O00144 591 aa17.21■□□□□ 0.35
RAD23A-205ENST00000588826 PPEF1O14829 653 aaPredicted RBP17.21■□□□□ 0.35
RAD23A-205ENST00000588826 HSPA1AP0DMV8 641 aaKnown RBP17.21■□□□□ 0.35
RAD23A-205ENST00000588826 HSPA1BP0DMV9 641 aaKnown RBP17.21■□□□□ 0.35
RAD23A-205ENST00000588826 EPHX2P34913 555 aa17.21■□□□□ 0.35
RAD23A-205ENST00000588826 GPC2Q8N158 579 aa17.21■□□□□ 0.35
RAD23A-205ENST00000588826 CRAMP1Q96RY5 1269 aa17.21■□□□□ 0.35
RAD23A-205ENST00000588826 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
RAD23A-205ENST00000588826 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
RAD23A-205ENST00000588826 WDR43Q15061 677 aaKnown RBP eCLIP17.2■□□□□ 0.34
RAD23A-205ENST00000588826 PDIA6Q15084 440 aa17.2■□□□□ 0.34
RAD23A-205ENST00000588826 HSP90AB3PQ58FF7 597 aa17.2■□□□□ 0.34
RAD23A-205ENST00000588826 COL13A1Q5TAT6 717 aaPredicted RBP17.2■□□□□ 0.34
RAD23A-205ENST00000588826 LRP10Q7Z4F1 713 aa17.2■□□□□ 0.34
RAD23A-205ENST00000588826 PNMA8AQ86V59 439 aaPredicted RBP17.2■□□□□ 0.34
RAD23A-205ENST00000588826 NLRP3Q96P20 1036 aa17.2■□□□□ 0.34
RAD23A-205ENST00000588826 UTP14AQ9BVJ6 771 aaKnown RBP17.2■□□□□ 0.34
RAD23A-205ENST00000588826 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
RAD23A-205ENST00000588826 PASKQ96RG2 1323 aa17.2■□□□□ 0.34
RAD23A-205ENST00000588826 TCERG1O14776 1098 aaKnown RBP17.19■□□□□ 0.34
RAD23A-205ENST00000588826 ANXA1P04083 346 aa17.19■□□□□ 0.34
RAD23A-205ENST00000588826 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
RAD23A-205ENST00000588826 NEUROD2Q15784 382 aa17.19■□□□□ 0.34
RAD23A-205ENST00000588826 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
RAD23A-205ENST00000588826 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
RAD23A-205ENST00000588826 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
RAD23A-205ENST00000588826 MKRN1Q9UHC7 482 aaKnown RBP17.19■□□□□ 0.34
RAD23A-205ENST00000588826 COL4A5P29400 1685 aa17.19■□□□□ 0.34
RAD23A-205ENST00000588826 NECTIN2Q92692 538 aa17.18■□□□□ 0.34
RAD23A-205ENST00000588826 GJA3Q9Y6H8 435 aa17.18■□□□□ 0.34
RAD23A-205ENST00000588826 LMOD1P29536 600 aaPredicted RBP17.17■□□□□ 0.34
RAD23A-205ENST00000588826 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
RAD23A-205ENST00000588826 C3orf67Q6ZVT6 689 aa17.17■□□□□ 0.34
RAD23A-205ENST00000588826 RUNDC1Q96C34 613 aa17.17■□□□□ 0.34
RAD23A-205ENST00000588826 LAS1LQ9Y4W2 734 aaKnown RBP17.17■□□□□ 0.34
RAD23A-205ENST00000588826 CNTNAP1P78357 1384 aa17.16■□□□□ 0.34
RAD23A-205ENST00000588826 LTBP1Q14766 1721 aa17.16■□□□□ 0.34
RAD23A-205ENST00000588826 TMEM88BA6NKF7 163 aa17.16■□□□□ 0.34
RAD23A-205ENST00000588826 COPS6Q7L5N1 327 aa17.16■□□□□ 0.34
RAD23A-205ENST00000588826 XAGE3Q8WTP9 111 aa17.16■□□□□ 0.34
RAD23A-205ENST00000588826 ABCC4O15439 1325 aa17.16■□□□□ 0.34
RAD23A-205ENST00000588826 TAF1P21675 1872 aa17.16■□□□□ 0.34
RAD23A-205ENST00000588826 DDX60Q8IY21 1712 aaKnown RBP17.16■□□□□ 0.34
RAD23A-205ENST00000588826 PPIP5K2O43314 1243 aa17.15■□□□□ 0.34
RAD23A-205ENST00000588826 SLC10A5Q5PT55 438 aa17.15■□□□□ 0.34
RAD23A-205ENST00000588826 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
RAD23A-205ENST00000588826 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
RAD23A-205ENST00000588826 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
RAD23A-205ENST00000588826 TRPM7Q96QT4 1865 aa17.15■□□□□ 0.34
RAD23A-205ENST00000588826 CHL1O00533 1208 aa17.14■□□□□ 0.33
RAD23A-205ENST00000588826 ITGBL1O95965 494 aaPredicted RBP17.14■□□□□ 0.33
RAD23A-205ENST00000588826 MAP1SQ66K74 1059 aaPredicted RBP17.14■□□□□ 0.33
RAD23A-205ENST00000588826 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
RAD23A-205ENST00000588826 TRMT112Q9UI30 125 aaKnown RBP17.14■□□□□ 0.33
RAD23A-205ENST00000588826 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
RAD23A-205ENST00000588826 ZNF316A6NFI3 1004 aaPredicted RBP17.13■□□□□ 0.33
RAD23A-205ENST00000588826 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
RAD23A-205ENST00000588826 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
RAD23A-205ENST00000588826 SLC51AQ86UW1 340 aa17.13■□□□□ 0.33
RAD23A-205ENST00000588826 CNTROBQ8N137 903 aa17.13■□□□□ 0.33
RAD23A-205ENST00000588826 SUPT20HQ8NEM7 779 aa17.13■□□□□ 0.33
RAD23A-205ENST00000588826 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
RAD23A-205ENST00000588826 TRIM35Q9UPQ4 493 aa17.13■□□□□ 0.33
RAD23A-205ENST00000588826 SH3TC1Q8TE82 1336 aa17.13■□□□□ 0.33
RAD23A-205ENST00000588826 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
RAD23A-205ENST00000588826 HOXB7P09629 217 aa17.12■□□□□ 0.33
RAD23A-205ENST00000588826 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
RAD23A-205ENST00000588826 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
RAD23A-205ENST00000588826 AOC3Q16853 763 aa17.12■□□□□ 0.33
RAD23A-205ENST00000588826 DDX46Q7L014 1031 aaKnown RBP17.12■□□□□ 0.33
RAD23A-205ENST00000588826 VPS33BQ9H267 617 aa17.12■□□□□ 0.33
RAD23A-205ENST00000588826 BBOX1O75936 387 aa17.11■□□□□ 0.33
RAD23A-205ENST00000588826 SCNN1DP51172 638 aa17.11■□□□□ 0.33
RAD23A-205ENST00000588826 DPP8Q6V1X1 898 aaPredicted RBP17.11■□□□□ 0.33
RAD23A-205ENST00000588826 SP8Q8IXZ3 490 aa17.1■□□□□ 0.33
RAD23A-205ENST00000588826 DBF4Q9UBU7 674 aaPredicted RBP17.1■□□□□ 0.33
RAD23A-205ENST00000588826 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
RAD23A-205ENST00000588826 CAPN15O75808 1086 aa17.09■□□□□ 0.33
RAD23A-205ENST00000588826 EPS15P42566 896 aa17.09■□□□□ 0.33
RAD23A-205ENST00000588826 GRAPQ13588 217 aa17.09■□□□□ 0.33
RAD23A-205ENST00000588826 USP50Q70EL3 339 aaPredicted RBP17.09■□□□□ 0.33
RAD23A-205ENST00000588826 MPNDQ8N594 471 aa17.09■□□□□ 0.33
RAD23A-205ENST00000588826 PLBD2Q8NHP8 589 aa17.09■□□□□ 0.33
RAD23A-205ENST00000588826 GRAPLQ8TC17 118 aaPredicted RBP17.09■□□□□ 0.33
RAD23A-205ENST00000588826 AIDAQ96BJ3 306 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms