RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 FZD9O00144 591 aa13.74□□□□□ -0.21
TVP23B-208ENST00000575261 EAPPQ56P03 285 aaPredicted RBP13.74□□□□□ -0.21
TVP23B-208ENST00000575261 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
TVP23B-208ENST00000575261 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
TVP23B-208ENST00000575261 RNF123Q5XPI4 1314 aa13.73□□□□□ -0.21
TVP23B-208ENST00000575261 NTSR2O95665 410 aa13.73□□□□□ -0.21
TVP23B-208ENST00000575261 HOXA10P31260 410 aaPredicted RBP13.73□□□□□ -0.21
TVP23B-208ENST00000575261 EPHX2P34913 555 aa13.73□□□□□ -0.21
TVP23B-208ENST00000575261 LMOD3Q0VAK6 560 aa13.73□□□□□ -0.21
TVP23B-208ENST00000575261 RALBP1Q15311 655 aa13.73□□□□□ -0.21
TVP23B-208ENST00000575261 GRIPAP1Q4V328 841 aa13.73□□□□□ -0.21
TVP23B-208ENST00000575261 SUSD4Q5VX71 490 aa13.73□□□□□ -0.21
TVP23B-208ENST00000575261 PPP1R42Q7Z4L9 355 aa13.73□□□□□ -0.21
TVP23B-208ENST00000575261 ZNF34Q8IZ26 560 aa13.73□□□□□ -0.21
TVP23B-208ENST00000575261 GPC2Q8N158 579 aa13.73□□□□□ -0.21
TVP23B-208ENST00000575261 MKRN1Q9UHC7 482 aaKnown RBP13.73□□□□□ -0.21
TVP23B-208ENST00000575261 CNTNAP1P78357 1384 aa13.72□□□□□ -0.21
TVP23B-208ENST00000575261 PPEF1O14829 653 aaPredicted RBP13.72□□□□□ -0.21
TVP23B-208ENST00000575261 RIPK4P57078 832 aa13.72□□□□□ -0.21
TVP23B-208ENST00000575261 PARP10Q53GL7 1025 aa13.72□□□□□ -0.21
TVP23B-208ENST00000575261 PNMA8AQ86V59 439 aaPredicted RBP13.72□□□□□ -0.21
TVP23B-208ENST00000575261 TNS4Q8IZW8 715 aa13.72□□□□□ -0.21
TVP23B-208ENST00000575261 RBM17Q96I25 401 aaKnown RBP13.72□□□□□ -0.21
TVP23B-208ENST00000575261 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
TVP23B-208ENST00000575261 COL4A5P29400 1685 aa13.72□□□□□ -0.21
TVP23B-208ENST00000575261 EIF2S2P20042 333 aaKnown RBP13.71□□□□□ -0.21
TVP23B-208ENST00000575261 EIF6P56537 245 aaKnown RBP13.71□□□□□ -0.21
TVP23B-208ENST00000575261 LRP10Q7Z4F1 713 aa13.71□□□□□ -0.21
TVP23B-208ENST00000575261 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
TVP23B-208ENST00000575261 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
TVP23B-208ENST00000575261 TMEM88BA6NKF7 163 aa13.7□□□□□ -0.22
TVP23B-208ENST00000575261 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
TVP23B-208ENST00000575261 LARGE2Q8N3Y3 721 aa13.7□□□□□ -0.22
TVP23B-208ENST00000575261 TMX4Q9H1E5 349 aaPredicted RBP13.7□□□□□ -0.22
TVP23B-208ENST00000575261 LAMB2P55268 1798 aa13.69□□□□□ -0.22
TVP23B-208ENST00000575261 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
TVP23B-208ENST00000575261 LMOD1P29536 600 aaPredicted RBP13.69□□□□□ -0.22
TVP23B-208ENST00000575261 PDIA6Q15084 440 aa13.69□□□□□ -0.22
TVP23B-208ENST00000575261 PROSER3Q2NL68 480 aa13.69□□□□□ -0.22
TVP23B-208ENST00000575261 HSP90AB3PQ58FF7 597 aa13.69□□□□□ -0.22
TVP23B-208ENST00000575261 NLRP3Q96P20 1036 aa13.69□□□□□ -0.22
TVP23B-208ENST00000575261 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
TVP23B-208ENST00000575261 GJA3Q9Y6H8 435 aa13.69□□□□□ -0.22
TVP23B-208ENST00000575261 LTBP1Q14766 1721 aa13.69□□□□□ -0.22
TVP23B-208ENST00000575261 MYBBP1AQ9BQG0 1328 aaKnown RBP13.68□□□□□ -0.22
TVP23B-208ENST00000575261 ANXA1P04083 346 aa13.68□□□□□ -0.22
TVP23B-208ENST00000575261 C3orf67Q6ZVT6 689 aa13.68□□□□□ -0.22
TVP23B-208ENST00000575261 ABCC4O15439 1325 aa13.67□□□□□ -0.22
TVP23B-208ENST00000575261 TCERG1O14776 1098 aaKnown RBP13.67□□□□□ -0.22
TVP23B-208ENST00000575261 PPIP5K2O43314 1243 aa13.67□□□□□ -0.22
TVP23B-208ENST00000575261 CAPN15O75808 1086 aa13.67□□□□□ -0.22
TVP23B-208ENST00000575261 MAP1SQ66K74 1059 aaPredicted RBP13.67□□□□□ -0.22
TVP23B-208ENST00000575261 NIM1KQ8IY84 436 aa13.67□□□□□ -0.22
TVP23B-208ENST00000575261 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
TVP23B-208ENST00000575261 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
TVP23B-208ENST00000575261 SCNN1DP51172 638 aa13.66□□□□□ -0.22
TVP23B-208ENST00000575261 SLC10A5Q5PT55 438 aa13.66□□□□□ -0.22
TVP23B-208ENST00000575261 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
TVP23B-208ENST00000575261 SLC51AQ86UW1 340 aa13.66□□□□□ -0.22
TVP23B-208ENST00000575261 NECTIN2Q92692 538 aa13.66□□□□□ -0.22
TVP23B-208ENST00000575261 VEGFBP49765 207 aa13.65□□□□□ -0.22
TVP23B-208ENST00000575261 AIMP1Q12904 312 aaKnown RBP13.65□□□□□ -0.22
TVP23B-208ENST00000575261 WDR43Q15061 677 aaKnown RBP eCLIP13.65□□□□□ -0.22
TVP23B-208ENST00000575261 NEUROD2Q15784 382 aa13.65□□□□□ -0.22
TVP23B-208ENST00000575261 NLRP10Q86W26 655 aa13.65□□□□□ -0.22
TVP23B-208ENST00000575261 CCDC146Q8IYE0 955 aa13.65□□□□□ -0.22
TVP23B-208ENST00000575261 SUPT20HQ8NEM7 779 aa13.65□□□□□ -0.22
TVP23B-208ENST00000575261 XAGE3Q8WTP9 111 aa13.65□□□□□ -0.22
TVP23B-208ENST00000575261 AIDAQ96BJ3 306 aa13.65□□□□□ -0.22
TVP23B-208ENST00000575261 VPS33BQ9H267 617 aa13.65□□□□□ -0.22
TVP23B-208ENST00000575261 DDX21Q9NR30 783 aaKnown RBP eCLIP13.65□□□□□ -0.22
TVP23B-208ENST00000575261 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
TVP23B-208ENST00000575261 RASSF10A6NK89 507 aa13.64□□□□□ -0.23
TVP23B-208ENST00000575261 AOC3Q16853 763 aa13.64□□□□□ -0.23
TVP23B-208ENST00000575261 USP50Q70EL3 339 aaPredicted RBP13.64□□□□□ -0.23
TVP23B-208ENST00000575261 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
TVP23B-208ENST00000575261 LRRC37AA6NMS7 1700 aa13.64□□□□□ -0.23
TVP23B-208ENST00000575261 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
TVP23B-208ENST00000575261 CHL1O00533 1208 aa13.63□□□□□ -0.23
TVP23B-208ENST00000575261 FOXN1O15353 648 aa13.63□□□□□ -0.23
TVP23B-208ENST00000575261 BBOX1O75936 387 aa13.63□□□□□ -0.23
TVP23B-208ENST00000575261 HOXB7P09629 217 aa13.63□□□□□ -0.23
TVP23B-208ENST00000575261 HCLS1P14317 486 aaPredicted RBP13.63□□□□□ -0.23
TVP23B-208ENST00000575261 EPS15P42566 896 aa13.63□□□□□ -0.23
TVP23B-208ENST00000575261 TCIRG1Q13488 830 aa13.63□□□□□ -0.23
TVP23B-208ENST00000575261 KRT24Q2M2I5 525 aa13.63□□□□□ -0.23
TVP23B-208ENST00000575261 DPP8Q6V1X1 898 aaPredicted RBP13.63□□□□□ -0.23
TVP23B-208ENST00000575261 DDX46Q7L014 1031 aaKnown RBP13.63□□□□□ -0.23
TVP23B-208ENST00000575261 RUNDC1Q96C34 613 aa13.63□□□□□ -0.23
TVP23B-208ENST00000575261 RTFDC1Q9BY42 306 aaPredicted RBP13.63□□□□□ -0.23
TVP23B-208ENST00000575261 CHPF2Q9P2E5 772 aa13.63□□□□□ -0.23
TVP23B-208ENST00000575261 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
TVP23B-208ENST00000575261 LAS1LQ9Y4W2 734 aaKnown RBP13.63□□□□□ -0.23
TVP23B-208ENST00000575261 THSD7BQ9C0I4 1608 aa13.63□□□□□ -0.23
TVP23B-208ENST00000575261 TRPM7Q96QT4 1865 aa13.62□□□□□ -0.23
TVP23B-208ENST00000575261 CTCFP49711 727 aaPredicted RBP13.62□□□□□ -0.23
TVP23B-208ENST00000575261 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
TVP23B-208ENST00000575261 GRAPQ13588 217 aa13.62□□□□□ -0.23
TVP23B-208ENST00000575261 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
TVP23B-208ENST00000575261 HDGFL1Q5TGJ6 251 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms