RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 GIGYF2Q6Y7W6 1299 aaKnown RBP28.98■■■□□ 2.23
SNF8-216ENST00000573795 PSMD1Q99460 953 aa28.98■■■□□ 2.23
SNF8-216ENST00000573795 HSPA1AP0DMV8 641 aaKnown RBP28.97■■■□□ 2.23
SNF8-216ENST00000573795 HSPA1BP0DMV9 641 aaKnown RBP28.97■■■□□ 2.23
SNF8-216ENST00000573795 RIPK4P57078 832 aa28.97■■■□□ 2.23
SNF8-216ENST00000573795 C3orf67Q6ZVT6 689 aa28.97■■■□□ 2.23
SNF8-216ENST00000573795 PROSER3Q2NL68 480 aa28.96■■■□□ 2.23
SNF8-216ENST00000573795 ANKRD36CQ5JPF3 1778 aa28.96■■■□□ 2.23
SNF8-216ENST00000573795 LTBP1Q14766 1721 aa28.94■■■□□ 2.22
SNF8-216ENST00000573795 TMPOP42166 694 aaKnown RBP28.94■■■□□ 2.22
SNF8-216ENST00000573795 RALBP1Q15311 655 aa28.94■■■□□ 2.22
SNF8-216ENST00000573795 RPGRQ92834 1020 aaKnown RBP28.94■■■□□ 2.22
SNF8-216ENST00000573795 HACL1Q9UJ83 578 aa28.94■■■□□ 2.22
SNF8-216ENST00000573795 RNF123Q5XPI4 1314 aa28.94■■■□□ 2.22
SNF8-216ENST00000573795 ITGBL1O95965 494 aaPredicted RBP28.93■■■□□ 2.22
SNF8-216ENST00000573795 ANXA1P04083 346 aa28.93■■■□□ 2.22
SNF8-216ENST00000573795 CC2D2BQ6DHV5 1058 aa28.93■■■□□ 2.22
SNF8-216ENST00000573795 MKRN1Q9UHC7 482 aaKnown RBP28.93■■■□□ 2.22
SNF8-216ENST00000573795 LAMB2P55268 1798 aa28.93■■■□□ 2.22
SNF8-216ENST00000573795 EIF2S2P20042 333 aaKnown RBP28.92■■■□□ 2.22
SNF8-216ENST00000573795 EPHX2P34913 555 aa28.92■■■□□ 2.22
SNF8-216ENST00000573795 CRAMP1Q96RY5 1269 aa28.92■■■□□ 2.22
SNF8-216ENST00000573795 BABAM1Q9NWV8 329 aa28.92■■■□□ 2.22
SNF8-216ENST00000573795 EAPPQ56P03 285 aaPredicted RBP28.91■■■□□ 2.22
SNF8-216ENST00000573795 PARP10Q53GL7 1025 aa28.9■■■□□ 2.22
SNF8-216ENST00000573795 GPC2Q8N158 579 aa28.9■■■□□ 2.22
SNF8-216ENST00000573795 CNTNAP1P78357 1384 aa28.89■■■□□ 2.22
SNF8-216ENST00000573795 PPEF1O14829 653 aaPredicted RBP28.89■■■□□ 2.22
SNF8-216ENST00000573795 PPP1R42Q7Z4L9 355 aa28.89■■■□□ 2.22
SNF8-216ENST00000573795 RBM17Q96I25 401 aaKnown RBP28.89■■■□□ 2.22
SNF8-216ENST00000573795 SLC10A5Q5PT55 438 aa28.87■■■□□ 2.21
SNF8-216ENST00000573795 JDP2Q8WYK2 163 aa28.87■■■□□ 2.21
SNF8-216ENST00000573795 TCERG1O14776 1098 aaKnown RBP28.86■■■□□ 2.21
SNF8-216ENST00000573795 LMOD3Q0VAK6 560 aa28.86■■■□□ 2.21
SNF8-216ENST00000573795 UTP14AQ9BVJ6 771 aaKnown RBP28.86■■■□□ 2.21
SNF8-216ENST00000573795 KRT24Q2M2I5 525 aa28.85■■■□□ 2.21
SNF8-216ENST00000573795 GRIPAP1Q4V328 841 aa28.85■■■□□ 2.21
SNF8-216ENST00000573795 CCDC146Q8IYE0 955 aa28.85■■■□□ 2.21
SNF8-216ENST00000573795 TNS4Q8IZW8 715 aa28.85■■■□□ 2.21
SNF8-216ENST00000573795 NECTIN2Q92692 538 aa28.85■■■□□ 2.21
SNF8-216ENST00000573795 MYBBP1AQ9BQG0 1328 aaKnown RBP28.85■■■□□ 2.21
SNF8-216ENST00000573795 COPS6Q7L5N1 327 aa28.84■■■□□ 2.21
SNF8-216ENST00000573795 PNMA8AQ86V59 439 aaPredicted RBP28.84■■■□□ 2.21
SNF8-216ENST00000573795 NLRP3Q96P20 1036 aa28.84■■■□□ 2.21
SNF8-216ENST00000573795 CLEC11AQ9Y240 323 aa28.84■■■□□ 2.21
SNF8-216ENST00000573795 ABCC4O15439 1325 aa28.84■■■□□ 2.21
SNF8-216ENST00000573795 TMEM88BA6NKF7 163 aa28.83■■■□□ 2.21
SNF8-216ENST00000573795 EIF6P56537 245 aaKnown RBP28.83■■■□□ 2.21
SNF8-216ENST00000573795 MAP1SQ66K74 1059 aaPredicted RBP28.83■■■□□ 2.21
SNF8-216ENST00000573795 LARGE2Q8N3Y3 721 aa28.83■■■□□ 2.21
SNF8-216ENST00000573795 XAGE3Q8WTP9 111 aa28.83■■■□□ 2.21
SNF8-216ENST00000573795 TRIM35Q9UPQ4 493 aa28.83■■■□□ 2.21
SNF8-216ENST00000573795 GJA3Q9Y6H8 435 aa28.83■■■□□ 2.21
SNF8-216ENST00000573795 CHL1O00533 1208 aa28.82■■■□□ 2.2
SNF8-216ENST00000573795 SCNN1DP51172 638 aa28.82■■■□□ 2.2
SNF8-216ENST00000573795 NLRP10Q86W26 655 aa28.82■■■□□ 2.2
SNF8-216ENST00000573795 DDX10Q13206 875 aaKnown RBP28.81■■■□□ 2.2
SNF8-216ENST00000573795 NEUROD2Q15784 382 aa28.81■■■□□ 2.2
SNF8-216ENST00000573795 CNTROBQ8N137 903 aa28.81■■■□□ 2.2
SNF8-216ENST00000573795 ATP6V0A2Q9Y487 856 aa28.81■■■□□ 2.2
SNF8-216ENST00000573795 TAF1P21675 1872 aa28.8■■■□□ 2.2
SNF8-216ENST00000573795 AIMP1Q12904 312 aaKnown RBP28.8■■■□□ 2.2
SNF8-216ENST00000573795 DDX21Q9NR30 783 aaKnown RBP eCLIP28.8■■■□□ 2.2
SNF8-216ENST00000573795 VEGFBP49765 207 aa28.79■■■□□ 2.2
SNF8-216ENST00000573795 DDX60Q8IY21 1712 aaKnown RBP28.79■■■□□ 2.2
SNF8-216ENST00000573795 HCLS1P14317 486 aaPredicted RBP28.78■■■□□ 2.2
SNF8-216ENST00000573795 EPS15P42566 896 aa28.78■■■□□ 2.2
SNF8-216ENST00000573795 AOC3Q16853 763 aa28.78■■■□□ 2.2
SNF8-216ENST00000573795 HSP90AB3PQ58FF7 597 aa28.78■■■□□ 2.2
SNF8-216ENST00000573795 PPIP5K2O43314 1243 aa28.77■■■□□ 2.2
SNF8-216ENST00000573795 TCIRG1Q13488 830 aa28.77■■■□□ 2.2
SNF8-216ENST00000573795 NIM1KQ8IY84 436 aa28.77■■■□□ 2.2
SNF8-216ENST00000573795 RUNDC1Q96C34 613 aa28.77■■■□□ 2.2
SNF8-216ENST00000573795 RTFDC1Q9BY42 306 aaPredicted RBP28.77■■■□□ 2.2
SNF8-216ENST00000573795 CHPF2Q9P2E5 772 aa28.76■■■□□ 2.19
SNF8-216ENST00000573795 LRRC37AA6NMS7 1700 aa28.75■■■□□ 2.19
SNF8-216ENST00000573795 FOXN1O15353 648 aa28.75■■■□□ 2.19
SNF8-216ENST00000573795 CAPN15O75808 1086 aa28.75■■■□□ 2.19
SNF8-216ENST00000573795 LMOD1P29536 600 aaPredicted RBP28.75■■■□□ 2.19
SNF8-216ENST00000573795 DUOX1Q9NRD9 1551 aa28.75■■■□□ 2.19
SNF8-216ENST00000573795 RASSF10A6NK89 507 aa28.74■■■□□ 2.19
SNF8-216ENST00000573795 VPS33BQ9H267 617 aa28.74■■■□□ 2.19
SNF8-216ENST00000573795 TRMT112Q9UI30 125 aaKnown RBP28.74■■■□□ 2.19
SNF8-216ENST00000573795 LAS1LQ9Y4W2 734 aaKnown RBP28.74■■■□□ 2.19
SNF8-216ENST00000573795 SH3TC1Q8TE82 1336 aa28.73■■■□□ 2.19
SNF8-216ENST00000573795 ADAMTS8Q9UP79 889 aa28.73■■■□□ 2.19
SNF8-216ENST00000573795 BBOX1O75936 387 aa28.72■■■□□ 2.19
SNF8-216ENST00000573795 FMR1Q06787 632 aaKnown RBP eCLIP28.72■■■□□ 2.19
SNF8-216ENST00000573795 SP8Q8IXZ3 490 aa28.72■■■□□ 2.19
SNF8-216ENST00000573795 ZNF428Q96B54 188 aa28.72■■■□□ 2.19
SNF8-216ENST00000573795 COL4A1P02462 1669 aa28.72■■■□□ 2.19
SNF8-216ENST00000573795 TRPM7Q96QT4 1865 aa28.72■■■□□ 2.19
SNF8-216ENST00000573795 CXCL9Q07325 125 aa28.71■■■□□ 2.19
SNF8-216ENST00000573795 WDR43Q15061 677 aaKnown RBP eCLIP28.71■■■□□ 2.19
SNF8-216ENST00000573795 HDGFL1Q5TGJ6 251 aa28.71■■■□□ 2.19
SNF8-216ENST00000573795 HOXB7P09629 217 aa28.7■■■□□ 2.18
SNF8-216ENST00000573795 GRAPQ13588 217 aa28.7■■■□□ 2.18
SNF8-216ENST00000573795 USP50Q70EL3 339 aaPredicted RBP28.7■■■□□ 2.18
SNF8-216ENST00000573795 SUPT20HQ8NEM7 779 aa28.7■■■□□ 2.18
SNF8-216ENST00000573795 GRAPLQ8TC17 118 aaPredicted RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms