RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 GRIPAP1Q4V328 841 aa24.68■■□□□ 1.54
GTF3C1-207ENST00000567806 PARP10Q53GL7 1025 aa24.68■■□□□ 1.54
GTF3C1-207ENST00000567806 HACL1Q9UJ83 578 aa24.68■■□□□ 1.54
GTF3C1-207ENST00000567806 CLEC11AQ9Y240 323 aa24.68■■□□□ 1.54
GTF3C1-207ENST00000567806 FZD9O00144 591 aa24.67■■□□□ 1.54
GTF3C1-207ENST00000567806 EAPPQ56P03 285 aaPredicted RBP24.67■■□□□ 1.54
GTF3C1-207ENST00000567806 COL13A1Q5TAT6 717 aaPredicted RBP24.67■■□□□ 1.54
GTF3C1-207ENST00000567806 CRAMP1Q96RY5 1269 aa24.67■■□□□ 1.54
GTF3C1-207ENST00000567806 NUP98P52948 1817 aa24.66■■□□□ 1.54
GTF3C1-207ENST00000567806 NTSR2O95665 410 aa24.66■■□□□ 1.54
GTF3C1-207ENST00000567806 DDX10Q13206 875 aaKnown RBP24.66■■□□□ 1.54
GTF3C1-207ENST00000567806 PDIA6Q15084 440 aa24.66■■□□□ 1.54
GTF3C1-207ENST00000567806 NLRP3Q96P20 1036 aa24.66■■□□□ 1.54
GTF3C1-207ENST00000567806 TMX4Q9H1E5 349 aaPredicted RBP24.66■■□□□ 1.54
GTF3C1-207ENST00000567806 TCERG1O14776 1098 aaKnown RBP24.65■■□□□ 1.54
GTF3C1-207ENST00000567806 NEUROD2Q15784 382 aa24.65■■□□□ 1.54
GTF3C1-207ENST00000567806 UTP14AQ9BVJ6 771 aaKnown RBP24.65■■□□□ 1.54
GTF3C1-207ENST00000567806 HSPA1AP0DMV8 641 aaKnown RBP24.64■■□□□ 1.54
GTF3C1-207ENST00000567806 HSPA1BP0DMV9 641 aaKnown RBP24.64■■□□□ 1.54
GTF3C1-207ENST00000567806 EPHX2P34913 555 aa24.64■■□□□ 1.54
GTF3C1-207ENST00000567806 EIF6P56537 245 aaKnown RBP24.64■■□□□ 1.54
GTF3C1-207ENST00000567806 PNMA8AQ86V59 439 aaPredicted RBP24.64■■□□□ 1.54
GTF3C1-207ENST00000567806 GPC2Q8N158 579 aa24.64■■□□□ 1.54
GTF3C1-207ENST00000567806 RIC1Q4ADV7 1423 aa24.63■■□□□ 1.53
GTF3C1-207ENST00000567806 PPEF1O14829 653 aaPredicted RBP24.63■■□□□ 1.53
GTF3C1-207ENST00000567806 ANXA1P04083 346 aa24.63■■□□□ 1.53
GTF3C1-207ENST00000567806 LRP10Q7Z4F1 713 aa24.63■■□□□ 1.53
GTF3C1-207ENST00000567806 NECTIN2Q92692 538 aa24.63■■□□□ 1.53
GTF3C1-207ENST00000567806 MKRN1Q9UHC7 482 aaKnown RBP24.63■■□□□ 1.53
GTF3C1-207ENST00000567806 MYBBP1AQ9BQG0 1328 aaKnown RBP24.62■■□□□ 1.53
GTF3C1-207ENST00000567806 AIMP1Q12904 312 aaKnown RBP24.62■■□□□ 1.53
GTF3C1-207ENST00000567806 PROSER3Q2NL68 480 aa24.62■■□□□ 1.53
GTF3C1-207ENST00000567806 HSP90AB3PQ58FF7 597 aa24.62■■□□□ 1.53
GTF3C1-207ENST00000567806 SLC10A5Q5PT55 438 aa24.62■■□□□ 1.53
GTF3C1-207ENST00000567806 COPS6Q7L5N1 327 aa24.62■■□□□ 1.53
GTF3C1-207ENST00000567806 CCDC146Q8IYE0 955 aa24.62■■□□□ 1.53
GTF3C1-207ENST00000567806 LARGE2Q8N3Y3 721 aa24.62■■□□□ 1.53
GTF3C1-207ENST00000567806 GJA3Q9Y6H8 435 aa24.62■■□□□ 1.53
GTF3C1-207ENST00000567806 SCN4AP35499 1836 aa24.61■■□□□ 1.53
GTF3C1-207ENST00000567806 WDR43Q15061 677 aaKnown RBP eCLIP24.61■■□□□ 1.53
GTF3C1-207ENST00000567806 LAS1LQ9Y4W2 734 aaKnown RBP24.61■■□□□ 1.53
GTF3C1-207ENST00000567806 RNF123Q5XPI4 1314 aa24.61■■□□□ 1.53
GTF3C1-207ENST00000567806 PASKQ96RG2 1323 aa24.61■■□□□ 1.53
GTF3C1-207ENST00000567806 C3orf67Q6ZVT6 689 aa24.6■■□□□ 1.53
GTF3C1-207ENST00000567806 RUNDC1Q96C34 613 aa24.6■■□□□ 1.53
GTF3C1-207ENST00000567806 ITGBL1O95965 494 aaPredicted RBP24.59■■□□□ 1.53
GTF3C1-207ENST00000567806 TNS4Q8IZW8 715 aa24.59■■□□□ 1.53
GTF3C1-207ENST00000567806 XAGE3Q8WTP9 111 aa24.59■■□□□ 1.53
GTF3C1-207ENST00000567806 PCNTO95613 3336 aa24.59■■□□□ 1.53
GTF3C1-207ENST00000567806 TMEM88BA6NKF7 163 aa24.58■■□□□ 1.53
GTF3C1-207ENST00000567806 CHL1O00533 1208 aa24.58■■□□□ 1.53
GTF3C1-207ENST00000567806 LMOD1P29536 600 aaPredicted RBP24.58■■□□□ 1.53
GTF3C1-207ENST00000567806 DDX21Q9NR30 783 aaKnown RBP eCLIP24.58■■□□□ 1.53
GTF3C1-207ENST00000567806 SNED1Q8TER0 1413 aa24.58■■□□□ 1.53
GTF3C1-207ENST00000567806 CNTROBQ8N137 903 aa24.57■■□□□ 1.52
GTF3C1-207ENST00000567806 ATP6V0A2Q9Y487 856 aa24.57■■□□□ 1.52
GTF3C1-207ENST00000567806 TCIRG1Q13488 830 aa24.56■■□□□ 1.52
GTF3C1-207ENST00000567806 NLRP10Q86W26 655 aa24.56■■□□□ 1.52
GTF3C1-207ENST00000567806 NIM1KQ8IY84 436 aa24.56■■□□□ 1.52
GTF3C1-207ENST00000567806 TRMT112Q9UI30 125 aaKnown RBP24.56■■□□□ 1.52
GTF3C1-207ENST00000567806 PPIP5K2O43314 1243 aa24.55■■□□□ 1.52
GTF3C1-207ENST00000567806 BBOX1O75936 387 aa24.55■■□□□ 1.52
GTF3C1-207ENST00000567806 MAP1SQ66K74 1059 aaPredicted RBP24.55■■□□□ 1.52
GTF3C1-207ENST00000567806 VPS33BQ9H267 617 aa24.55■■□□□ 1.52
GTF3C1-207ENST00000567806 TRIM35Q9UPQ4 493 aa24.55■■□□□ 1.52
GTF3C1-207ENST00000567806 HCLS1P14317 486 aaPredicted RBP24.54■■□□□ 1.52
GTF3C1-207ENST00000567806 KRT24Q2M2I5 525 aa24.54■■□□□ 1.52
GTF3C1-207ENST00000567806 SUPT20HQ8NEM7 779 aa24.54■■□□□ 1.52
GTF3C1-207ENST00000567806 CNTNAP1P78357 1384 aa24.54■■□□□ 1.52
GTF3C1-207ENST00000567806 DDX46Q7L014 1031 aaKnown RBP24.53■■□□□ 1.52
GTF3C1-207ENST00000567806 ADAMTS8Q9UP79 889 aa24.53■■□□□ 1.52
GTF3C1-207ENST00000567806 ABCC4O15439 1325 aa24.53■■□□□ 1.52
GTF3C1-207ENST00000567806 SLC51AQ86UW1 340 aa24.52■■□□□ 1.52
GTF3C1-207ENST00000567806 SP8Q8IXZ3 490 aa24.52■■□□□ 1.52
GTF3C1-207ENST00000567806 CHPF2Q9P2E5 772 aa24.52■■□□□ 1.52
GTF3C1-207ENST00000567806 SH3TC1Q8TE82 1336 aa24.52■■□□□ 1.52
GTF3C1-207ENST00000567806 EPS15P42566 896 aa24.51■■□□□ 1.51
GTF3C1-207ENST00000567806 AOC3Q16853 763 aa24.51■■□□□ 1.51
GTF3C1-207ENST00000567806 HDGFL1Q5TGJ6 251 aa24.51■■□□□ 1.51
GTF3C1-207ENST00000567806 DPP8Q6V1X1 898 aaPredicted RBP24.51■■□□□ 1.51
GTF3C1-207ENST00000567806 VEGFBP49765 207 aa24.5■■□□□ 1.51
GTF3C1-207ENST00000567806 MPNDQ8N594 471 aa24.5■■□□□ 1.51
GTF3C1-207ENST00000567806 CAPN15O75808 1086 aa24.49■■□□□ 1.51
GTF3C1-207ENST00000567806 HOXB7P09629 217 aa24.49■■□□□ 1.51
GTF3C1-207ENST00000567806 SCNN1DP51172 638 aa24.49■■□□□ 1.51
GTF3C1-207ENST00000567806 ANKRD13DQ6ZTN6 518 aa24.49■■□□□ 1.51
GTF3C1-207ENST00000567806 PLBD2Q8NHP8 589 aa24.49■■□□□ 1.51
GTF3C1-207ENST00000567806 RTFDC1Q9BY42 306 aaPredicted RBP24.49■■□□□ 1.51
GTF3C1-207ENST00000567806 DBF4Q9UBU7 674 aaPredicted RBP24.49■■□□□ 1.51
GTF3C1-207ENST00000567806 ZNRF3Q9ULT6 936 aa24.49■■□□□ 1.51
GTF3C1-207ENST00000567806 COL4A5P29400 1685 aa24.49■■□□□ 1.51
GTF3C1-207ENST00000567806 GRAPQ13588 217 aa24.48■■□□□ 1.51
GTF3C1-207ENST00000567806 DEFB115Q30KQ5 88 aa24.48■■□□□ 1.51
GTF3C1-207ENST00000567806 USP50Q70EL3 339 aaPredicted RBP24.48■■□□□ 1.51
GTF3C1-207ENST00000567806 GRAPLQ8TC17 118 aaPredicted RBP24.48■■□□□ 1.51
GTF3C1-207ENST00000567806 CFAP44Q96MT7 982 aa24.48■■□□□ 1.51
GTF3C1-207ENST00000567806 AIDAQ96BJ3 306 aa24.47■■□□□ 1.51
GTF3C1-207ENST00000567806 CXCL9Q07325 125 aa24.46■■□□□ 1.51
GTF3C1-207ENST00000567806 ZNF428Q96B54 188 aa24.46■■□□□ 1.51
GTF3C1-207ENST00000567806 HYPKQ9NX55 129 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms