RNA–Protein interactions for RNA: ENST00000559212.1

PCAT29-203, prostate cancer associated transcript 29, humanhuman

TSL 3 BASIC

Gene PCAT29, Length 647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-203ENST00000559212 PARP10Q53GL7 1025 aa13.89□□□□□ -0.19
PCAT29-203ENST00000559212 RBM17Q96I25 401 aaKnown RBP13.89□□□□□ -0.19
PCAT29-203ENST00000559212 CREBZFQ9NS37 354 aa13.89□□□□□ -0.19
PCAT29-203ENST00000559212 HACL1Q9UJ83 578 aa13.89□□□□□ -0.19
PCAT29-203ENST00000559212 FZD9O00144 591 aa13.88□□□□□ -0.19
PCAT29-203ENST00000559212 PDIA6Q15084 440 aa13.88□□□□□ -0.19
PCAT29-203ENST00000559212 GRIPAP1Q4V328 841 aa13.88□□□□□ -0.19
PCAT29-203ENST00000559212 EAPPQ56P03 285 aaPredicted RBP13.88□□□□□ -0.19
PCAT29-203ENST00000559212 COL13A1Q5TAT6 717 aaPredicted RBP13.88□□□□□ -0.19
PCAT29-203ENST00000559212 JDP2Q8WYK2 163 aa13.88□□□□□ -0.19
PCAT29-203ENST00000559212 SNED1Q8TER0 1413 aa13.88□□□□□ -0.19
PCAT29-203ENST00000559212 MYBBP1AQ9BQG0 1328 aaKnown RBP13.88□□□□□ -0.19
PCAT29-203ENST00000559212 PPEF1O14829 653 aaPredicted RBP13.87□□□□□ -0.19
PCAT29-203ENST00000559212 HSPA1AP0DMV8 641 aaKnown RBP13.87□□□□□ -0.19
PCAT29-203ENST00000559212 HSPA1BP0DMV9 641 aaKnown RBP13.87□□□□□ -0.19
PCAT29-203ENST00000559212 EPHX2P34913 555 aa13.87□□□□□ -0.19
PCAT29-203ENST00000559212 LRP10Q7Z4F1 713 aa13.87□□□□□ -0.19
PCAT29-203ENST00000559212 NLRP3Q96P20 1036 aa13.87□□□□□ -0.19
PCAT29-203ENST00000559212 CRAMP1Q96RY5 1269 aa13.87□□□□□ -0.19
PCAT29-203ENST00000559212 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
PCAT29-203ENST00000559212 RNF123Q5XPI4 1314 aa13.87□□□□□ -0.19
PCAT29-203ENST00000559212 ANKRD36CQ5JPF3 1778 aa13.86□□□□□ -0.19
PCAT29-203ENST00000559212 TCERG1O14776 1098 aaKnown RBP13.86□□□□□ -0.19
PCAT29-203ENST00000559212 ANXA1P04083 346 aa13.86□□□□□ -0.19
PCAT29-203ENST00000559212 EIF6P56537 245 aaKnown RBP13.86□□□□□ -0.19
PCAT29-203ENST00000559212 DDX10Q13206 875 aaKnown RBP13.86□□□□□ -0.19
PCAT29-203ENST00000559212 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
PCAT29-203ENST00000559212 PROSER3Q2NL68 480 aa13.86□□□□□ -0.19
PCAT29-203ENST00000559212 PNMA8AQ86V59 439 aaPredicted RBP13.86□□□□□ -0.19
PCAT29-203ENST00000559212 CCDC146Q8IYE0 955 aa13.86□□□□□ -0.19
PCAT29-203ENST00000559212 GPC2Q8N158 579 aa13.86□□□□□ -0.19
PCAT29-203ENST00000559212 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
PCAT29-203ENST00000559212 UTP14AQ9BVJ6 771 aaKnown RBP13.86□□□□□ -0.19
PCAT29-203ENST00000559212 TMX4Q9H1E5 349 aaPredicted RBP13.86□□□□□ -0.19
PCAT29-203ENST00000559212 MKRN1Q9UHC7 482 aaKnown RBP13.86□□□□□ -0.19
PCAT29-203ENST00000559212 AIMP1Q12904 312 aaKnown RBP13.85□□□□□ -0.19
PCAT29-203ENST00000559212 WDR43Q15061 677 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCAT29-203ENST00000559212 HSP90AB3PQ58FF7 597 aa13.85□□□□□ -0.19
PCAT29-203ENST00000559212 C3orf67Q6ZVT6 689 aa13.85□□□□□ -0.19
PCAT29-203ENST00000559212 LARGE2Q8N3Y3 721 aa13.85□□□□□ -0.19
PCAT29-203ENST00000559212 ADAMTSL1Q8N6G6 1762 aa13.85□□□□□ -0.19
PCAT29-203ENST00000559212 PASKQ96RG2 1323 aa13.85□□□□□ -0.19
PCAT29-203ENST00000559212 SLC10A5Q5PT55 438 aa13.84□□□□□ -0.19
PCAT29-203ENST00000559212 COPS6Q7L5N1 327 aa13.84□□□□□ -0.19
PCAT29-203ENST00000559212 XAGE3Q8WTP9 111 aa13.84□□□□□ -0.19
PCAT29-203ENST00000559212 RUNDC1Q96C34 613 aa13.84□□□□□ -0.19
PCAT29-203ENST00000559212 LAS1LQ9Y4W2 734 aaKnown RBP13.84□□□□□ -0.19
PCAT29-203ENST00000559212 GJA3Q9Y6H8 435 aa13.84□□□□□ -0.19
PCAT29-203ENST00000559212 COL4A5P29400 1685 aa13.83□□□□□ -0.2
PCAT29-203ENST00000559212 TMEM88BA6NKF7 163 aa13.83□□□□□ -0.2
PCAT29-203ENST00000559212 ITGBL1O95965 494 aaPredicted RBP13.83□□□□□ -0.2
PCAT29-203ENST00000559212 LMOD1P29536 600 aaPredicted RBP13.83□□□□□ -0.2
PCAT29-203ENST00000559212 TNS4Q8IZW8 715 aa13.83□□□□□ -0.2
PCAT29-203ENST00000559212 DDX21Q9NR30 783 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCAT29-203ENST00000559212 CNTNAP1P78357 1384 aa13.83□□□□□ -0.2
PCAT29-203ENST00000559212 LAMB2P55268 1798 aa13.82□□□□□ -0.2
PCAT29-203ENST00000559212 CHL1O00533 1208 aa13.82□□□□□ -0.2
PCAT29-203ENST00000559212 SLC51AQ86UW1 340 aa13.82□□□□□ -0.2
PCAT29-203ENST00000559212 NLRP10Q86W26 655 aa13.82□□□□□ -0.2
PCAT29-203ENST00000559212 NIM1KQ8IY84 436 aa13.82□□□□□ -0.2
PCAT29-203ENST00000559212 ATP6V0A2Q9Y487 856 aa13.82□□□□□ -0.2
PCAT29-203ENST00000559212 ABCC4O15439 1325 aa13.82□□□□□ -0.2
PCAT29-203ENST00000559212 PPIP5K2O43314 1243 aa13.81□□□□□ -0.2
PCAT29-203ENST00000559212 TCIRG1Q13488 830 aa13.81□□□□□ -0.2
PCAT29-203ENST00000559212 KRT24Q2M2I5 525 aa13.81□□□□□ -0.2
PCAT29-203ENST00000559212 MAP1SQ66K74 1059 aaPredicted RBP13.81□□□□□ -0.2
PCAT29-203ENST00000559212 CNTROBQ8N137 903 aa13.81□□□□□ -0.2
PCAT29-203ENST00000559212 SUPT20HQ8NEM7 779 aa13.81□□□□□ -0.2
PCAT29-203ENST00000559212 VPS33BQ9H267 617 aa13.81□□□□□ -0.2
PCAT29-203ENST00000559212 TRMT112Q9UI30 125 aaKnown RBP13.81□□□□□ -0.2
PCAT29-203ENST00000559212 TRIM35Q9UPQ4 493 aa13.81□□□□□ -0.2
PCAT29-203ENST00000559212 LTBP1Q14766 1721 aa13.81□□□□□ -0.2
PCAT29-203ENST00000559212 BBOX1O75936 387 aa13.8□□□□□ -0.2
PCAT29-203ENST00000559212 HCLS1P14317 486 aaPredicted RBP13.8□□□□□ -0.2
PCAT29-203ENST00000559212 AOC3Q16853 763 aa13.8□□□□□ -0.2
PCAT29-203ENST00000559212 HDGFL1Q5TGJ6 251 aa13.8□□□□□ -0.2
PCAT29-203ENST00000559212 CHPF2Q9P2E5 772 aa13.8□□□□□ -0.2
PCAT29-203ENST00000559212 SH3TC1Q8TE82 1336 aa13.8□□□□□ -0.2
PCAT29-203ENST00000559212 HOXB7P09629 217 aa13.79□□□□□ -0.2
PCAT29-203ENST00000559212 SCNN1DP51172 638 aa13.79□□□□□ -0.2
PCAT29-203ENST00000559212 DDX46Q7L014 1031 aaKnown RBP13.79□□□□□ -0.2
PCAT29-203ENST00000559212 SP8Q8IXZ3 490 aa13.79□□□□□ -0.2
PCAT29-203ENST00000559212 ADAMTS8Q9UP79 889 aa13.79□□□□□ -0.2
PCAT29-203ENST00000559212 CAPN15O75808 1086 aa13.78□□□□□ -0.2
PCAT29-203ENST00000559212 EPS15P42566 896 aa13.78□□□□□ -0.2
PCAT29-203ENST00000559212 VEGFBP49765 207 aa13.78□□□□□ -0.2
PCAT29-203ENST00000559212 DPP8Q6V1X1 898 aaPredicted RBP13.78□□□□□ -0.2
PCAT29-203ENST00000559212 USP50Q70EL3 339 aaPredicted RBP13.78□□□□□ -0.2
PCAT29-203ENST00000559212 MPNDQ8N594 471 aa13.78□□□□□ -0.2
PCAT29-203ENST00000559212 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
PCAT29-203ENST00000559212 RTFDC1Q9BY42 306 aaPredicted RBP13.78□□□□□ -0.2
PCAT29-203ENST00000559212 DBF4Q9UBU7 674 aaPredicted RBP13.78□□□□□ -0.2
PCAT29-203ENST00000559212 GRAPQ13588 217 aa13.77□□□□□ -0.21
PCAT29-203ENST00000559212 DEFB115Q30KQ5 88 aa13.77□□□□□ -0.21
PCAT29-203ENST00000559212 ANKRD13DQ6ZTN6 518 aa13.77□□□□□ -0.21
PCAT29-203ENST00000559212 GRAPLQ8TC17 118 aaPredicted RBP13.77□□□□□ -0.21
PCAT29-203ENST00000559212 CFAP44Q96MT7 982 aa13.77□□□□□ -0.21
PCAT29-203ENST00000559212 ZNRF3Q9ULT6 936 aa13.77□□□□□ -0.21
PCAT29-203ENST00000559212 DDX60Q8IY21 1712 aaKnown RBP13.76□□□□□ -0.21
PCAT29-203ENST00000559212 FOXN1O15353 648 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms