RNA–Protein interactions for RNA: ENST00000558619.5

CRTC3-206, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-206ENST00000558619 PARP10Q53GL7 1025 aa22.53■■□□□ 1.2
CRTC3-206ENST00000558619 RBM17Q96I25 401 aaKnown RBP22.53■■□□□ 1.2
CRTC3-206ENST00000558619 SNED1Q8TER0 1413 aa22.53■■□□□ 1.2
CRTC3-206ENST00000558619 WDR43Q15061 677 aaKnown RBP eCLIP22.52■■□□□ 1.2
CRTC3-206ENST00000558619 PDIA6Q15084 440 aa22.52■■□□□ 1.2
CRTC3-206ENST00000558619 PSMD1Q99460 953 aa22.52■■□□□ 1.2
CRTC3-206ENST00000558619 LAMB2P55268 1798 aa22.52■■□□□ 1.2
CRTC3-206ENST00000558619 ANXA1P04083 346 aa22.51■■□□□ 1.19
CRTC3-206ENST00000558619 PROSER3Q2NL68 480 aa22.51■■□□□ 1.19
CRTC3-206ENST00000558619 CC2D2BQ6DHV5 1058 aa22.51■■□□□ 1.19
CRTC3-206ENST00000558619 LRP10Q7Z4F1 713 aa22.51■■□□□ 1.19
CRTC3-206ENST00000558619 NECTIN2Q92692 538 aa22.51■■□□□ 1.19
CRTC3-206ENST00000558619 PPEF1O14829 653 aaPredicted RBP22.5■■□□□ 1.19
CRTC3-206ENST00000558619 HOXA10P31260 410 aaPredicted RBP22.5■■□□□ 1.19
CRTC3-206ENST00000558619 LDHDQ86WU2 507 aa22.5■■□□□ 1.19
CRTC3-206ENST00000558619 JDP2Q8WYK2 163 aa22.5■■□□□ 1.19
CRTC3-206ENST00000558619 TAF1DQ9H5J8 278 aaPredicted RBP22.5■■□□□ 1.19
CRTC3-206ENST00000558619 ADAMTSL1Q8N6G6 1762 aa22.49■■□□□ 1.19
CRTC3-206ENST00000558619 FZD9O00144 591 aa22.49■■□□□ 1.19
CRTC3-206ENST00000558619 RUNDC1Q96C34 613 aa22.49■■□□□ 1.19
CRTC3-206ENST00000558619 UTP14AQ9BVJ6 771 aaKnown RBP22.49■■□□□ 1.19
CRTC3-206ENST00000558619 HACL1Q9UJ83 578 aa22.49■■□□□ 1.19
CRTC3-206ENST00000558619 LAS1LQ9Y4W2 734 aaKnown RBP22.49■■□□□ 1.19
CRTC3-206ENST00000558619 AIMP1Q12904 312 aaKnown RBP22.48■■□□□ 1.19
CRTC3-206ENST00000558619 GRIPAP1Q4V328 841 aa22.48■■□□□ 1.19
CRTC3-206ENST00000558619 EAPPQ56P03 285 aaPredicted RBP22.48■■□□□ 1.19
CRTC3-206ENST00000558619 NLRP3Q96P20 1036 aa22.48■■□□□ 1.19
CRTC3-206ENST00000558619 CRAMP1Q96RY5 1269 aa22.48■■□□□ 1.19
CRTC3-206ENST00000558619 CREBZFQ9NS37 354 aa22.48■■□□□ 1.19
CRTC3-206ENST00000558619 RNF123Q5XPI4 1314 aa22.48■■□□□ 1.19
CRTC3-206ENST00000558619 COL4A5P29400 1685 aa22.47■■□□□ 1.19
CRTC3-206ENST00000558619 TCERG1O14776 1098 aaKnown RBP22.47■■□□□ 1.19
CRTC3-206ENST00000558619 HSP90AB3PQ58FF7 597 aa22.47■■□□□ 1.19
CRTC3-206ENST00000558619 C3orf67Q6ZVT6 689 aa22.47■■□□□ 1.19
CRTC3-206ENST00000558619 COPS6Q7L5N1 327 aa22.47■■□□□ 1.19
CRTC3-206ENST00000558619 PCNTO95613 3336 aa22.47■■□□□ 1.19
CRTC3-206ENST00000558619 GPC2Q8N158 579 aa22.46■■□□□ 1.19
CRTC3-206ENST00000558619 XAGE3Q8WTP9 111 aa22.46■■□□□ 1.19
CRTC3-206ENST00000558619 TMX4Q9H1E5 349 aaPredicted RBP22.46■■□□□ 1.19
CRTC3-206ENST00000558619 CHL1O00533 1208 aa22.45■■□□□ 1.18
CRTC3-206ENST00000558619 EPHX2P34913 555 aa22.45■■□□□ 1.18
CRTC3-206ENST00000558619 EIF6P56537 245 aaKnown RBP22.45■■□□□ 1.18
CRTC3-206ENST00000558619 TRIM35Q9UPQ4 493 aa22.45■■□□□ 1.18
CRTC3-206ENST00000558619 CLEC11AQ9Y240 323 aa22.45■■□□□ 1.18
CRTC3-206ENST00000558619 KRT24Q2M2I5 525 aa22.44■■□□□ 1.18
CRTC3-206ENST00000558619 COL13A1Q5TAT6 717 aaPredicted RBP22.44■■□□□ 1.18
CRTC3-206ENST00000558619 LARGE2Q8N3Y3 721 aa22.44■■□□□ 1.18
CRTC3-206ENST00000558619 DDX21Q9NR30 783 aaKnown RBP eCLIP22.44■■□□□ 1.18
CRTC3-206ENST00000558619 PASKQ96RG2 1323 aa22.43■■□□□ 1.18
CRTC3-206ENST00000558619 SLC10A5Q5PT55 438 aa22.43■■□□□ 1.18
CRTC3-206ENST00000558619 SLC51AQ86UW1 340 aa22.43■■□□□ 1.18
CRTC3-206ENST00000558619 PNMA8AQ86V59 439 aaPredicted RBP22.43■■□□□ 1.18
CRTC3-206ENST00000558619 MKRN1Q9UHC7 482 aaKnown RBP22.43■■□□□ 1.18
CRTC3-206ENST00000558619 ADAMTS8Q9UP79 889 aa22.43■■□□□ 1.18
CRTC3-206ENST00000558619 GJA3Q9Y6H8 435 aa22.43■■□□□ 1.18
CRTC3-206ENST00000558619 ABCC4O15439 1325 aa22.42■■□□□ 1.18
CRTC3-206ENST00000558619 HSPA1AP0DMV8 641 aaKnown RBP22.42■■□□□ 1.18
CRTC3-206ENST00000558619 HSPA1BP0DMV9 641 aaKnown RBP22.42■■□□□ 1.18
CRTC3-206ENST00000558619 NLRP10Q86W26 655 aa22.42■■□□□ 1.18
CRTC3-206ENST00000558619 CHPF2Q9P2E5 772 aa22.42■■□□□ 1.18
CRTC3-206ENST00000558619 LTBP1Q14766 1721 aa22.42■■□□□ 1.18
CRTC3-206ENST00000558619 DDX60Q8IY21 1712 aaKnown RBP22.42■■□□□ 1.18
CRTC3-206ENST00000558619 TCIRG1Q13488 830 aa22.41■■□□□ 1.18
CRTC3-206ENST00000558619 HDGFL1Q5TGJ6 251 aa22.41■■□□□ 1.18
CRTC3-206ENST00000558619 TRMT112Q9UI30 125 aaKnown RBP22.41■■□□□ 1.18
CRTC3-206ENST00000558619 ATP6V0A2Q9Y487 856 aa22.41■■□□□ 1.18
CRTC3-206ENST00000558619 CAPN15O75808 1086 aa22.4■■□□□ 1.18
CRTC3-206ENST00000558619 LMOD1P29536 600 aaPredicted RBP22.4■■□□□ 1.18
CRTC3-206ENST00000558619 NIM1KQ8IY84 436 aa22.4■■□□□ 1.18
CRTC3-206ENST00000558619 SH3TC1Q8TE82 1336 aa22.39■■□□□ 1.18
CRTC3-206ENST00000558619 PPIP5K2O43314 1243 aa22.39■■□□□ 1.17
CRTC3-206ENST00000558619 HOXB7P09629 217 aa22.39■■□□□ 1.17
CRTC3-206ENST00000558619 HCLS1P14317 486 aaPredicted RBP22.39■■□□□ 1.17
CRTC3-206ENST00000558619 PRKRIP1Q9H875 184 aaPredicted RBP22.39■■□□□ 1.17
CRTC3-206ENST00000558619 TAF1P21675 1872 aa22.39■■□□□ 1.17
CRTC3-206ENST00000558619 CNTNAP1P78357 1384 aa22.38■■□□□ 1.17
CRTC3-206ENST00000558619 AOC3Q16853 763 aa22.38■■□□□ 1.17
CRTC3-206ENST00000558619 TNS4Q8IZW8 715 aa22.38■■□□□ 1.17
CRTC3-206ENST00000558619 CFAP44Q96MT7 982 aa22.38■■□□□ 1.17
CRTC3-206ENST00000558619 TMEM88BA6NKF7 163 aa22.37■■□□□ 1.17
CRTC3-206ENST00000558619 ITGBL1O95965 494 aaPredicted RBP22.37■■□□□ 1.17
CRTC3-206ENST00000558619 MAP1SQ66K74 1059 aaPredicted RBP22.37■■□□□ 1.17
CRTC3-206ENST00000558619 DDX46Q7L014 1031 aaKnown RBP22.37■■□□□ 1.17
CRTC3-206ENST00000558619 SUPT20HQ8NEM7 779 aa22.37■■□□□ 1.17
CRTC3-206ENST00000558619 DBF4Q9UBU7 674 aaPredicted RBP22.37■■□□□ 1.17
CRTC3-206ENST00000558619 BBOX1O75936 387 aa22.36■■□□□ 1.17
CRTC3-206ENST00000558619 CNTROBQ8N137 903 aa22.36■■□□□ 1.17
CRTC3-206ENST00000558619 PLBD2Q8NHP8 589 aa22.36■■□□□ 1.17
CRTC3-206ENST00000558619 VPS33BQ9H267 617 aa22.36■■□□□ 1.17
CRTC3-206ENST00000558619 LRRC37AA6NMS7 1700 aa22.36■■□□□ 1.17
CRTC3-206ENST00000558619 DPP8Q6V1X1 898 aaPredicted RBP22.35■■□□□ 1.17
CRTC3-206ENST00000558619 ANKRD13DQ6ZTN6 518 aa22.35■■□□□ 1.17
CRTC3-206ENST00000558619 ZNF428Q96B54 188 aa22.35■■□□□ 1.17
CRTC3-206ENST00000558619 SCNN1DP51172 638 aa22.34■■□□□ 1.17
CRTC3-206ENST00000558619 GRAPQ13588 217 aa22.34■■□□□ 1.17
CRTC3-206ENST00000558619 DUSP27Q5VZP5 1158 aa22.34■■□□□ 1.17
CRTC3-206ENST00000558619 SP8Q8IXZ3 490 aa22.34■■□□□ 1.17
CRTC3-206ENST00000558619 GRAPLQ8TC17 118 aaPredicted RBP22.34■■□□□ 1.17
CRTC3-206ENST00000558619 MBIPQ9NS73 344 aa22.34■■□□□ 1.17
CRTC3-206ENST00000558619 MPNDQ8N594 471 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms