RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 HACL1Q9UJ83 578 aa16.5■□□□□ 0.23
USF1-211ENST00000534633 PASKQ96RG2 1323 aa16.49■□□□□ 0.23
USF1-211ENST00000534633 LAMB2P55268 1798 aa16.49■□□□□ 0.23
USF1-211ENST00000534633 GPTP24298 496 aa16.49■□□□□ 0.23
USF1-211ENST00000534633 HOXA10P31260 410 aaPredicted RBP16.49■□□□□ 0.23
USF1-211ENST00000534633 GRIPAP1Q4V328 841 aa16.49■□□□□ 0.23
USF1-211ENST00000534633 GIGYF2Q6Y7W6 1299 aaKnown RBP16.49■□□□□ 0.23
USF1-211ENST00000534633 ZNF34Q8IZ26 560 aa16.49■□□□□ 0.23
USF1-211ENST00000534633 TSPYL4Q9UJ04 414 aa16.49■□□□□ 0.23
USF1-211ENST00000534633 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
USF1-211ENST00000534633 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
USF1-211ENST00000534633 BABAM1Q9NWV8 329 aa16.48■□□□□ 0.23
USF1-211ENST00000534633 NTSR2O95665 410 aa16.47■□□□□ 0.23
USF1-211ENST00000534633 EPHX2P34913 555 aa16.47■□□□□ 0.23
USF1-211ENST00000534633 PARP10Q53GL7 1025 aa16.47■□□□□ 0.23
USF1-211ENST00000534633 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
USF1-211ENST00000534633 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
USF1-211ENST00000534633 PNMA8AQ86V59 439 aaPredicted RBP16.47■□□□□ 0.23
USF1-211ENST00000534633 GPC2Q8N158 579 aa16.47■□□□□ 0.23
USF1-211ENST00000534633 RBM17Q96I25 401 aaKnown RBP16.47■□□□□ 0.23
USF1-211ENST00000534633 CRAMP1Q96RY5 1269 aa16.47■□□□□ 0.23
USF1-211ENST00000534633 COL4A5P29400 1685 aa16.46■□□□□ 0.23
USF1-211ENST00000534633 MYBBP1AQ9BQG0 1328 aaKnown RBP16.46■□□□□ 0.23
USF1-211ENST00000534633 RIPK4P57078 832 aa16.46■□□□□ 0.23
USF1-211ENST00000534633 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.23
USF1-211ENST00000534633 LRP10Q7Z4F1 713 aa16.46■□□□□ 0.23
USF1-211ENST00000534633 TNS4Q8IZW8 715 aa16.46■□□□□ 0.23
USF1-211ENST00000534633 MKRN1Q9UHC7 482 aaKnown RBP16.46■□□□□ 0.23
USF1-211ENST00000534633 CNTNAP1P78357 1384 aa16.46■□□□□ 0.23
USF1-211ENST00000534633 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
USF1-211ENST00000534633 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
USF1-211ENST00000534633 ITGBL1O95965 494 aaPredicted RBP16.45■□□□□ 0.22
USF1-211ENST00000534633 PDIA6Q15084 440 aa16.45■□□□□ 0.22
USF1-211ENST00000534633 PPEF1O14829 653 aaPredicted RBP16.44■□□□□ 0.22
USF1-211ENST00000534633 EIF2S2P20042 333 aaKnown RBP16.44■□□□□ 0.22
USF1-211ENST00000534633 TMPOP42166 694 aaKnown RBP16.44■□□□□ 0.22
USF1-211ENST00000534633 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
USF1-211ENST00000534633 NLRP3Q96P20 1036 aa16.44■□□□□ 0.22
USF1-211ENST00000534633 CLEC11AQ9Y240 323 aa16.44■□□□□ 0.22
USF1-211ENST00000534633 TRPM7Q96QT4 1865 aa16.44■□□□□ 0.22
USF1-211ENST00000534633 TMEM88BA6NKF7 163 aa16.43■□□□□ 0.22
USF1-211ENST00000534633 CCDC184Q52MB2 194 aa16.43■□□□□ 0.22
USF1-211ENST00000534633 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
USF1-211ENST00000534633 C3orf67Q6ZVT6 689 aa16.42■□□□□ 0.22
USF1-211ENST00000534633 LARGE2Q8N3Y3 721 aa16.42■□□□□ 0.22
USF1-211ENST00000534633 UTP14AQ9BVJ6 771 aaKnown RBP16.42■□□□□ 0.22
USF1-211ENST00000534633 ANXA1P04083 346 aa16.41■□□□□ 0.22
USF1-211ENST00000534633 LMOD1P29536 600 aaPredicted RBP16.41■□□□□ 0.22
USF1-211ENST00000534633 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
USF1-211ENST00000534633 HSP90AB3PQ58FF7 597 aa16.41■□□□□ 0.22
USF1-211ENST00000534633 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
USF1-211ENST00000534633 TMX4Q9H1E5 349 aaPredicted RBP16.41■□□□□ 0.22
USF1-211ENST00000534633 VPS33BQ9H267 617 aa16.41■□□□□ 0.22
USF1-211ENST00000534633 GJA3Q9Y6H8 435 aa16.41■□□□□ 0.22
USF1-211ENST00000534633 TAF1P21675 1872 aa16.41■□□□□ 0.22
USF1-211ENST00000534633 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
USF1-211ENST00000534633 DDX60Q8IY21 1712 aaKnown RBP16.39■□□□□ 0.21
USF1-211ENST00000534633 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
USF1-211ENST00000534633 MAP1SQ66K74 1059 aaPredicted RBP16.39■□□□□ 0.21
USF1-211ENST00000534633 COPS6Q7L5N1 327 aa16.39■□□□□ 0.21
USF1-211ENST00000534633 SLC51AQ86UW1 340 aa16.39■□□□□ 0.21
USF1-211ENST00000534633 NIM1KQ8IY84 436 aa16.39■□□□□ 0.21
USF1-211ENST00000534633 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
USF1-211ENST00000534633 LRRC37AA6NMS7 1700 aa16.39■□□□□ 0.21
USF1-211ENST00000534633 CHL1O00533 1208 aa16.38■□□□□ 0.21
USF1-211ENST00000534633 PPIP5K2O43314 1243 aa16.38■□□□□ 0.21
USF1-211ENST00000534633 VEGFBP49765 207 aa16.38■□□□□ 0.21
USF1-211ENST00000534633 SCNN1DP51172 638 aa16.38■□□□□ 0.21
USF1-211ENST00000534633 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
USF1-211ENST00000534633 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
USF1-211ENST00000534633 XAGE3Q8WTP9 111 aa16.38■□□□□ 0.21
USF1-211ENST00000534633 ABCC4O15439 1325 aa16.38■□□□□ 0.21
USF1-211ENST00000534633 RASSF10A6NK89 507 aa16.37■□□□□ 0.21
USF1-211ENST00000534633 ANP32CO43423 234 aa16.37■□□□□ 0.21
USF1-211ENST00000534633 CAPN15O75808 1086 aa16.37■□□□□ 0.21
USF1-211ENST00000534633 BBOX1O75936 387 aa16.37■□□□□ 0.21
USF1-211ENST00000534633 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
USF1-211ENST00000534633 TCIRG1Q13488 830 aa16.37■□□□□ 0.21
USF1-211ENST00000534633 NEUROD2Q15784 382 aa16.37■□□□□ 0.21
USF1-211ENST00000534633 AOC3Q16853 763 aa16.37■□□□□ 0.21
USF1-211ENST00000534633 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
USF1-211ENST00000534633 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
USF1-211ENST00000534633 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
USF1-211ENST00000534633 FOXN1O15353 648 aa16.36■□□□□ 0.21
USF1-211ENST00000534633 EPS15P42566 896 aa16.36■□□□□ 0.21
USF1-211ENST00000534633 USP50Q70EL3 339 aaPredicted RBP16.36■□□□□ 0.21
USF1-211ENST00000534633 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
USF1-211ENST00000534633 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
USF1-211ENST00000534633 THSD7BQ9C0I4 1608 aa16.36■□□□□ 0.21
USF1-211ENST00000534633 SH3TC1Q8TE82 1336 aa16.36■□□□□ 0.21
USF1-211ENST00000534633 HOXB7P09629 217 aa16.35■□□□□ 0.21
USF1-211ENST00000534633 HCLS1P14317 486 aaPredicted RBP16.35■□□□□ 0.21
USF1-211ENST00000534633 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
USF1-211ENST00000534633 DEFB115Q30KQ5 88 aa16.35■□□□□ 0.21
USF1-211ENST00000534633 DDX46Q7L014 1031 aaKnown RBP16.35■□□□□ 0.21
USF1-211ENST00000534633 AIDAQ96BJ3 306 aa16.35■□□□□ 0.21
USF1-211ENST00000534633 TRMT112Q9UI30 125 aaKnown RBP16.35■□□□□ 0.21
USF1-211ENST00000534633 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
USF1-211ENST00000534633 KRT24Q2M2I5 525 aa16.34■□□□□ 0.21
USF1-211ENST00000534633 DPP8Q6V1X1 898 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms