RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 ATP2B1P20020 1258 aa8.96□□□□□ -0.98
ATM-208ENST00000525537 CLN3Q13286 438 aa8.96□□□□□ -0.98
ATM-208ENST00000525537 L3MBTL2Q969R5 705 aa8.96□□□□□ -0.98
ATM-208ENST00000525537 GMLQ99445 158 aa8.96□□□□□ -0.98
ATM-208ENST00000525537 FHDC1Q9C0D6 1143 aaPredicted RBP8.96□□□□□ -0.98
ATM-208ENST00000525537 HCN4Q9Y3Q4 1203 aa8.96□□□□□ -0.98
ATM-208ENST00000525537 EIF1AYO14602 144 aaKnown RBP8.95□□□□□ -0.98
ATM-208ENST00000525537 NEFLP07196 543 aa8.95□□□□□ -0.98
ATM-208ENST00000525537 ADH1AP07327 375 aa8.95□□□□□ -0.98
ATM-208ENST00000525537 CTSHP09668 335 aa8.95□□□□□ -0.98
ATM-208ENST00000525537 DNAJC2Q99543 621 aaKnown RBP8.95□□□□□ -0.98
ATM-208ENST00000525537 PHACTR1Q9C0D0 580 aa8.95□□□□□ -0.98
ATM-208ENST00000525537 DNAJC25Q9H1X3 360 aa8.95□□□□□ -0.98
ATM-208ENST00000525537 CABP1Q9NZU7 370 aa8.95□□□□□ -0.98
ATM-208ENST00000525537 KLK14Q9P0G3 267 aa8.95□□□□□ -0.98
ATM-208ENST00000525537 SPG7Q9UQ90 795 aa8.95□□□□□ -0.98
ATM-208ENST00000525537 ORC1Q13415 861 aa8.94□□□□□ -0.98
ATM-208ENST00000525537 GIMAP6Q6P9H5 292 aa8.94□□□□□ -0.98
ATM-208ENST00000525537 NOP9Q86U38 636 aaKnown RBP8.94□□□□□ -0.98
ATM-208ENST00000525537 H3BM21 787 aa8.93□□□□□ -0.98
ATM-208ENST00000525537 RPLP1P05386 114 aaKnown RBP8.93□□□□□ -0.98
ATM-208ENST00000525537 TNNI2P48788 182 aa8.93□□□□□ -0.98
ATM-208ENST00000525537 CENPCQ03188 943 aa8.93□□□□□ -0.98
ATM-208ENST00000525537 C1orf53Q5VUE5 145 aa8.93□□□□□ -0.98
ATM-208ENST00000525537 TREML1Q86YW5 311 aa8.93□□□□□ -0.98
ATM-208ENST00000525537 KDF1Q8NAX2 398 aaPredicted RBP8.93□□□□□ -0.98
ATM-208ENST00000525537 DHX38Q92620 1227 aaKnown RBP8.93□□□□□ -0.98
ATM-208ENST00000525537 NUDT16Q96DE0 195 aaKnown RBP8.93□□□□□ -0.98
ATM-208ENST00000525537 LNPKQ9C0E8 428 aa8.93□□□□□ -0.98
ATM-208ENST00000525537 FAM13BQ9NYF5 915 aa8.93□□□□□ -0.98
ATM-208ENST00000525537 DDX41Q9UJV9 622 aaKnown RBP8.93□□□□□ -0.98
ATM-208ENST00000525537 ERBB4Q15303 1308 aa8.93□□□□□ -0.98
ATM-208ENST00000525537 EIF4BP23588 611 aaKnown RBP8.92□□□□□ -0.98
ATM-208ENST00000525537 GTF2F1P35269 517 aaKnown RBP eCLIP8.92□□□□□ -0.98
ATM-208ENST00000525537 VEGFBP49765 207 aa8.92□□□□□ -0.98
ATM-208ENST00000525537 PPARGC1BQ86YN6 1023 aaKnown RBP8.92□□□□□ -0.98
ATM-208ENST00000525537 ZNF654Q8IZM8 581 aa8.92□□□□□ -0.98
ATM-208ENST00000525537 GPR152Q8TDT2 470 aa8.92□□□□□ -0.98
ATM-208ENST00000525537 PTPN12Q05209 780 aaKnown RBP8.91□□□□□ -0.98
ATM-208ENST00000525537 TTC16Q8NEE8 873 aa8.91□□□□□ -0.98
ATM-208ENST00000525537 NIFKQ9BYG3 293 aaKnown RBP8.91□□□□□ -0.98
ATM-208ENST00000525537 GGNBP2Q9H3C7 697 aa8.91□□□□□ -0.98
ATM-208ENST00000525537 INPP5FQ9Y2H2 1132 aa8.91□□□□□ -0.98
ATM-208ENST00000525537 PARP3Q9Y6F1 533 aa8.91□□□□□ -0.98
ATM-208ENST00000525537 OPLAHO14841 1288 aa8.9□□□□□ -0.98
ATM-208ENST00000525537 PPM1GO15355 546 aaPredicted RBP8.9□□□□□ -0.98
ATM-208ENST00000525537 CPNE3O75131 537 aaKnown RBP8.9□□□□□ -0.98
ATM-208ENST00000525537 NCLP19338 710 aaKnown RBP8.9□□□□□ -0.98
ATM-208ENST00000525537 DNAJA1P31689 397 aaKnown RBP8.9□□□□□ -0.98
ATM-208ENST00000525537 ARID5AQ03989 594 aa8.9□□□□□ -0.98
ATM-208ENST00000525537 C8orf34Q49A92 452 aa8.9□□□□□ -0.98
ATM-208ENST00000525537 GIPC1O14908 333 aa8.89□□□□□ -0.99
ATM-208ENST00000525537 PTGIRP43119 386 aa8.89□□□□□ -0.99
ATM-208ENST00000525537 RACK1P63244 317 aaKnown RBP8.89□□□□□ -0.99
ATM-208ENST00000525537 ZNF394Q53GI3 561 aa8.89□□□□□ -0.99
ATM-208ENST00000525537 HS2ST1Q7LGA3 356 aa8.89□□□□□ -0.99
ATM-208ENST00000525537 USP48Q86UV5 1035 aa8.89□□□□□ -0.99
ATM-208ENST00000525537 NLRP3Q96P20 1036 aa8.89□□□□□ -0.99
ATM-208ENST00000525537 RBL2Q08999 1139 aa8.88□□□□□ -0.99
ATM-208ENST00000525537 HIF1AQ16665 826 aa8.88□□□□□ -0.99
ATM-208ENST00000525537 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.88□□□□□ -0.99
ATM-208ENST00000525537 Q6ZVU0 165 aa8.88□□□□□ -0.99
ATM-208ENST00000525537 ZSCAN10Q96SZ4 725 aaPredicted RBP8.88□□□□□ -0.99
ATM-208ENST00000525537 C12orf49Q9H741 205 aa8.88□□□□□ -0.99
ATM-208ENST00000525537 BCS1LQ9Y276 419 aa8.88□□□□□ -0.99
ATM-208ENST00000525537 PCDHGB7Q9Y5F8 929 aa8.88□□□□□ -0.99
ATM-208ENST00000525537 USP31Q70CQ4 1352 aa8.87□□□□□ -0.99
ATM-208ENST00000525537 MEN1O00255 615 aa8.87□□□□□ -0.99
ATM-208ENST00000525537 GSK3AP49840 483 aa8.87□□□□□ -0.99
ATM-208ENST00000525537 TRIM46Q7Z4K8 759 aa8.87□□□□□ -0.99
ATM-208ENST00000525537 RHBDD1Q8TEB9 315 aa8.87□□□□□ -0.99
ATM-208ENST00000525537 SRA1Q9HD15 236 aaKnown RBP8.87□□□□□ -0.99
ATM-208ENST00000525537 A6NHS1 94 aa8.86□□□□□ -0.99
ATM-208ENST00000525537 TGFBR3LH3BV60 316 aa8.86□□□□□ -0.99
ATM-208ENST00000525537 MICAL2O94851 1124 aa8.86□□□□□ -0.99
ATM-208ENST00000525537 BMP1P13497 986 aa8.86□□□□□ -0.99
ATM-208ENST00000525537 GTF2E1P29083 439 aaPredicted RBP8.86□□□□□ -0.99
ATM-208ENST00000525537 KCNMA1Q12791 1236 aa8.86□□□□□ -0.99
ATM-208ENST00000525537 CBLBQ13191 982 aa8.86□□□□□ -0.99
ATM-208ENST00000525537 CCDC144BQ3MJ40 725 aa8.86□□□□□ -0.99
ATM-208ENST00000525537 TMEM214Q6NUQ4 689 aaKnown RBP8.86□□□□□ -0.99
ATM-208ENST00000525537 TMA7Q9Y2S6 64 aaKnown RBP8.86□□□□□ -0.99
ATM-208ENST00000525537 TXLNAP40222 546 aa8.85□□□□□ -0.99
ATM-208ENST00000525537 NNTQ13423 1086 aa8.85□□□□□ -0.99
ATM-208ENST00000525537 SOGA3Q5TF21 947 aa8.85□□□□□ -0.99
ATM-208ENST00000525537 XKR5Q6UX68 686 aa8.85□□□□□ -0.99
ATM-208ENST00000525537 VPS37DQ86XT2 251 aa8.85□□□□□ -0.99
ATM-208ENST00000525537 HIRIP3Q9BW71 556 aaPredicted RBP8.85□□□□□ -0.99
ATM-208ENST00000525537 OSBPL7Q9BZF2 842 aa8.85□□□□□ -0.99
ATM-208ENST00000525537 GGT7Q9UJ14 662 aa8.85□□□□□ -0.99
ATM-208ENST00000525537 ANKRD62A6NC57 917 aa8.84□□□□□ -0.99
ATM-208ENST00000525537 TNFRSF21O75509 655 aa8.84□□□□□ -0.99
ATM-208ENST00000525537 ST13P50502 369 aaKnown RBP8.84□□□□□ -0.99
ATM-208ENST00000525537 IER5Q5VY09 327 aa8.84□□□□□ -0.99
ATM-208ENST00000525537 RHPN1Q8TCX5 695 aa8.84□□□□□ -0.99
ATM-208ENST00000525537 CCDC74AQ96AQ1 378 aa8.84□□□□□ -0.99
ATM-208ENST00000525537 FAM8A1Q9UBU6 413 aa8.84□□□□□ -0.99
ATM-208ENST00000525537 TLDC2A0PJX2 215 aa8.83□□□□□ -1
ATM-208ENST00000525537 GJA8P48165 433 aa8.83□□□□□ -1
ATM-208ENST00000525537 TAF1CQ15572 869 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms