RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 CFHR5Q9BXR6 569 aa9.14□□□□□ -0.95
NEB-216ENST00000497809 TMX1Q9H3N1 280 aa9.14□□□□□ -0.95
NEB-216ENST00000497809 AS3MTQ9HBK9 375 aa9.14□□□□□ -0.95
NEB-216ENST00000497809 NPHP1O15259 732 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 SLC4A3P48751 1232 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 RAB33AQ14088 237 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 DALRD3Q5D0E6 543 aaKnown RBP9.13□□□□□ -0.95
NEB-216ENST00000497809 CERKQ8TCT0 537 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 TRIM55Q9BYV6 548 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 ANAPC4Q9UJX5 808 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 PDZRN3Q9UPQ7 1066 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 CTDP1Q9Y5B0 961 aaPredicted RBP9.13□□□□□ -0.95
NEB-216ENST00000497809 PNMA6FA0A0J9YX94 578 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 SHTN1A0MZ66 631 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 C3orf80F5H4A9 247 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 SSBP05455 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
NEB-216ENST00000497809 POLD1P28340 1107 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 WEE1P30291 646 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 ATP1A2P50993 1020 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 SQSTM1Q13501 440 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 TMEM95Q3KNT9 176 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.13□□□□□ -0.95
NEB-216ENST00000497809 DNAJC7Q99615 494 aa9.13□□□□□ -0.95
NEB-216ENST00000497809 C6orf229H3BNL8 230 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 CCDC102BQ68D86 513 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 HOMER1Q86YM7 354 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 DMRTB1Q96MA1 342 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 MRPS23Q9Y3D9 190 aaKnown RBP9.12□□□□□ -0.95
NEB-216ENST00000497809 V9GY48 417 aaPredicted RBP9.12□□□□□ -0.95
NEB-216ENST00000497809 FZD6O60353 706 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 ATF3P18847 181 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 USP46P62068 366 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 C6orf132Q5T0Z8 1188 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 CCDC174Q6PII3 467 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.12□□□□□ -0.95
NEB-216ENST00000497809 TRIM50Q86XT4 487 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 TTC30BQ8N4P2 665 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 NGDNQ8NEJ9 315 aaKnown RBP9.12□□□□□ -0.95
NEB-216ENST00000497809 FAM129BQ96TA1 746 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 HINFPQ9BQA5 517 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 CHIC2Q9UKJ5 165 aa9.12□□□□□ -0.95
NEB-216ENST00000497809 CCDC96Q2M329 555 aa9.11□□□□□ -0.95
NEB-216ENST00000497809 FEZ1Q99689 392 aa9.11□□□□□ -0.95
NEB-216ENST00000497809 DYTNA2CJ06 578 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 DHX16O60231 1041 aaKnown RBP9.1□□□□□ -0.95
NEB-216ENST00000497809 EPHB1P54762 984 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 KANK3Q6NY19 840 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 KSR2Q6VAB6 950 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 EMID1Q96A84 441 aaPredicted RBP9.1□□□□□ -0.95
NEB-216ENST00000497809 CDCA7LQ96GN5 454 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 TMEM260Q9NX78 707 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 TAGLN3Q9UI15 199 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 FRMD4BQ9Y2L6 1034 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 LEMD3Q9Y2U8 911 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 AK5Q9Y6K8 562 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
NEB-216ENST00000497809 NFX1Q12986 1120 aaKnown RBP9.1□□□□□ -0.95
NEB-216ENST00000497809 PPARGC1BQ86YN6 1023 aaKnown RBP9.1□□□□□ -0.95
NEB-216ENST00000497809 CHPFQ8IZ52 775 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 MYRIPQ8NFW9 859 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 RASGRP4Q8TDF6 673 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 PTCD2Q8WV60 388 aaKnown RBP9.1□□□□□ -0.95
NEB-216ENST00000497809 YTHDC1Q96MU7 727 aaKnown RBP9.1□□□□□ -0.95
NEB-216ENST00000497809 CDC5LQ99459 802 aaKnown RBP9.1□□□□□ -0.95
NEB-216ENST00000497809 NIF3L1Q9GZT8 377 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 MUC3BQ9H195 1237 aa9.1□□□□□ -0.95
NEB-216ENST00000497809 KCNQ2O43526 872 aa9.09□□□□□ -0.95
NEB-216ENST00000497809 GCGRP47871 477 aa9.09□□□□□ -0.95
NEB-216ENST00000497809 MCL1Q07820 350 aa9.09□□□□□ -0.95
NEB-216ENST00000497809 L1TD1Q5T7N2 865 aaKnown RBP9.09□□□□□ -0.95
NEB-216ENST00000497809 DRC7Q8IY82 874 aa9.09□□□□□ -0.95
NEB-216ENST00000497809 NKX2-3Q8TAU0 364 aa9.09□□□□□ -0.95
NEB-216ENST00000497809 E2F7Q96AV8 911 aa9.09□□□□□ -0.95
NEB-216ENST00000497809 CITED4Q96RK1 184 aa9.09□□□□□ -0.95
NEB-216ENST00000497809 COPRSQ9NQ92 184 aa9.09□□□□□ -0.95
NEB-216ENST00000497809 A6NJY4 79 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 TRAPPC10P48553 1259 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 GTF2IP78347 998 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 GRAMD1BQ3KR37 738 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 ACBD5Q5T8D3 534 aaPredicted RBP9.08□□□□□ -0.96
NEB-216ENST00000497809 C16orf86Q6ZW13 317 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 KRT26Q7Z3Y9 468 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 TRPM4Q8TD43 1214 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 ALKBH8Q96BT7 664 aaKnown RBP9.08□□□□□ -0.96
NEB-216ENST00000497809 ZNF700Q9H0M5 742 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 RSPH9Q9H1X1 276 aaPredicted RBP9.08□□□□□ -0.96
NEB-216ENST00000497809 ZRANB2O95218 330 aaKnown RBP eCLIP9.08□□□□□ -0.96
NEB-216ENST00000497809 SRGNP10124 158 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 ERAP2Q6P179 960 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 DDX42Q86XP3 938 aaKnown RBP eCLIP9.08□□□□□ -0.96
NEB-216ENST00000497809 MYO1HQ8N1T3 1032 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 TTC8Q8TAM2 541 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 TMEM134Q9H6X4 195 aa9.08□□□□□ -0.96
NEB-216ENST00000497809 CLGNO14967 610 aa9.07□□□□□ -0.96
NEB-216ENST00000497809 CNGA1P29973 690 aa9.07□□□□□ -0.96
NEB-216ENST00000497809 NASPP49321 788 aaPredicted RBP9.07□□□□□ -0.96
NEB-216ENST00000497809 TERF1P54274 439 aa9.07□□□□□ -0.96
NEB-216ENST00000497809 LONRF1Q17RB8 773 aa9.07□□□□□ -0.96
NEB-216ENST00000497809 ALG1LQ6GMV1 187 aa9.07□□□□□ -0.96
NEB-216ENST00000497809 SLC4A10Q6U841 1118 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms