RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
NEB-216ENST00000497809 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
NEB-216ENST00000497809 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
NEB-216ENST00000497809 PHF23Q9BUL5 403 aaPredicted RBP17.12■□□□□ 0.33
NEB-216ENST00000497809 SLC24A1O60721 1099 aa16.23■□□□□ 0.19
NEB-216ENST00000497809 FOXD1Q16676 465 aa16.22■□□□□ 0.19
NEB-216ENST00000497809 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
NEB-216ENST00000497809 POTEDQ86YR6 584 aa15.4■□□□□ 0.06
NEB-216ENST00000497809 MSH5O43196 834 aa15.38■□□□□ 0.05
NEB-216ENST00000497809 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
NEB-216ENST00000497809 PIAS4Q8N2W9 510 aaPredicted RBP15.11■□□□□ 0.01
NEB-216ENST00000497809 RTN4Q9NQC3 1192 aaKnown RBP15.04■□□□□ -0
NEB-216ENST00000497809 CSRNP3Q8WYN3 585 aa14.94□□□□□ -0.02
NEB-216ENST00000497809 KCNA4P22459 653 aa14.92□□□□□ -0.02
NEB-216ENST00000497809 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
NEB-216ENST00000497809 ADRA2BP18089 450 aa14.85□□□□□ -0.03
NEB-216ENST00000497809 AMER1Q5JTC6 1135 aaPredicted RBP14.73□□□□□ -0.05
NEB-216ENST00000497809 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
NEB-216ENST00000497809 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
NEB-216ENST00000497809 DAXXQ9UER7 740 aaPredicted RBP14.27□□□□□ -0.12
NEB-216ENST00000497809 PRKCSHP14314 528 aaPredicted RBP14.16□□□□□ -0.14
NEB-216ENST00000497809 ZBTB22O15209 634 aa13.85□□□□□ -0.19
NEB-216ENST00000497809 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
NEB-216ENST00000497809 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
NEB-216ENST00000497809 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
NEB-216ENST00000497809 TIMELESSQ9UNS1 1208 aa13.74□□□□□ -0.21
NEB-216ENST00000497809 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
NEB-216ENST00000497809 ARXQ96QS3 562 aa13.7□□□□□ -0.22
NEB-216ENST00000497809 BCANQ96GW7 911 aa13.65□□□□□ -0.22
NEB-216ENST00000497809 PLCB2Q00722 1185 aa13.59□□□□□ -0.23
NEB-216ENST00000497809 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
NEB-216ENST00000497809 TULP1O00294 542 aaPredicted RBP13.54□□□□□ -0.24
NEB-216ENST00000497809 NPM3O75607 178 aaKnown RBP13.42□□□□□ -0.26
NEB-216ENST00000497809 HAP1P54257 671 aaPredicted RBP13.42□□□□□ -0.26
NEB-216ENST00000497809 FKBP8Q14318 412 aa13.36□□□□□ -0.27
NEB-216ENST00000497809 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
NEB-216ENST00000497809 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
NEB-216ENST00000497809 HOMEZQ8IX15 550 aa13.3□□□□□ -0.28
NEB-216ENST00000497809 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
NEB-216ENST00000497809 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
NEB-216ENST00000497809 HOXD11P31277 338 aaPredicted RBP13.16□□□□□ -0.3
NEB-216ENST00000497809 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
NEB-216ENST00000497809 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
NEB-216ENST00000497809 RANGAP1P46060 587 aaPredicted RBP13.09□□□□□ -0.31
NEB-216ENST00000497809 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
NEB-216ENST00000497809 RNF39Q9H2S5 420 aa13.04□□□□□ -0.32
NEB-216ENST00000497809 KDM2AQ9Y2K7 1162 aa13.03□□□□□ -0.32
NEB-216ENST00000497809 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
NEB-216ENST00000497809 PODXL2Q9NZ53 605 aa12.96□□□□□ -0.33
NEB-216ENST00000497809 APLP2Q06481 763 aa12.94□□□□□ -0.34
NEB-216ENST00000497809 TMEM132AQ24JP5 1023 aa12.93□□□□□ -0.34
NEB-216ENST00000497809 FBLN2P98095 1184 aa12.92□□□□□ -0.34
NEB-216ENST00000497809 ERICH6Q7L0X2 663 aa12.91□□□□□ -0.34
NEB-216ENST00000497809 C1QBPQ07021 282 aaKnown RBP12.88□□□□□ -0.35
NEB-216ENST00000497809 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
NEB-216ENST00000497809 DNAJC5BQ9UF47 199 aa12.85□□□□□ -0.35
NEB-216ENST00000497809 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
NEB-216ENST00000497809 DCAF8L2P0C7V8 631 aa12.8□□□□□ -0.36
NEB-216ENST00000497809 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
NEB-216ENST00000497809 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
NEB-216ENST00000497809 TTBK1Q5TCY1 1321 aaPredicted RBP12.59□□□□□ -0.39
NEB-216ENST00000497809 SUPT5HO00267 1087 aaKnown RBP12.58□□□□□ -0.4
NEB-216ENST00000497809 MYT1Q01538 1121 aa12.57□□□□□ -0.4
NEB-216ENST00000497809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEB-216ENST00000497809 TRIM26Q12899 539 aaPredicted RBP12.52□□□□□ -0.4
NEB-216ENST00000497809 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
NEB-216ENST00000497809 CFAP44Q96MT7 982 aa12.48□□□□□ -0.41
NEB-216ENST00000497809 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
NEB-216ENST00000497809 UBTFP17480 764 aaKnown RBP12.44□□□□□ -0.42
NEB-216ENST00000497809 PKD2Q13563 968 aa12.43□□□□□ -0.42
NEB-216ENST00000497809 NBR1Q14596 966 aa12.43□□□□□ -0.42
NEB-216ENST00000497809 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
NEB-216ENST00000497809 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
NEB-216ENST00000497809 BBXQ8WY36 941 aaPredicted RBP12.41□□□□□ -0.42
NEB-216ENST00000497809 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
NEB-216ENST00000497809 HRCP23327 699 aa12.38□□□□□ -0.43
NEB-216ENST00000497809 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
NEB-216ENST00000497809 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
NEB-216ENST00000497809 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
NEB-216ENST00000497809 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
NEB-216ENST00000497809 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
NEB-216ENST00000497809 VASPP50552 380 aaPredicted RBP12.19□□□□□ -0.46
NEB-216ENST00000497809 SPRYD3Q8NCJ5 442 aa12.18□□□□□ -0.46
NEB-216ENST00000497809 CAPN15O75808 1086 aa12.12□□□□□ -0.47
NEB-216ENST00000497809 EIF5BO60841 1220 aaKnown RBP12.12□□□□□ -0.47
NEB-216ENST00000497809 LOC105371045A0A1W2PR82 267 aa12.1□□□□□ -0.47
NEB-216ENST00000497809 DSG3P32926 999 aa12.1□□□□□ -0.47
NEB-216ENST00000497809 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
NEB-216ENST00000497809 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
NEB-216ENST00000497809 POTEHQ6S545 545 aa12.03□□□□□ -0.48
NEB-216ENST00000497809 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
NEB-216ENST00000497809 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
NEB-216ENST00000497809 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
NEB-216ENST00000497809 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.5
NEB-216ENST00000497809 RGL2O15211 777 aa11.92□□□□□ -0.5
NEB-216ENST00000497809 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
NEB-216ENST00000497809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.88□□□□□ -0.51
NEB-216ENST00000497809 HNRNPUL2Q1KMD3 747 aaKnown RBP11.88□□□□□ -0.51
NEB-216ENST00000497809 CCDC9Q9Y3X0 531 aaKnown RBP11.87□□□□□ -0.51
NEB-216ENST00000497809 ARID3AQ99856 593 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms