RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 SOGA3Q5TF21 947 aa6.61□□□□□ -1.35
GTF3A-208ENST00000493903 GIMAP6Q6P9H5 292 aa6.61□□□□□ -1.35
GTF3A-208ENST00000493903 CSRNP1Q96S65 589 aa6.61□□□□□ -1.35
GTF3A-208ENST00000493903 IQSEC3Q9UPP2 1182 aaPredicted RBP6.61□□□□□ -1.35
GTF3A-208ENST00000493903 EML1O00423 815 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 ATCAYQ86WG3 371 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 ZNF654Q8IZM8 581 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 EDEM1Q92611 657 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 SETDB2Q96T68 719 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 ESYT1Q9BSJ8 1104 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 CFHR5Q9BXR6 569 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 LNPKQ9C0E8 428 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 ACBD3Q9H3P7 528 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 DDX41Q9UJV9 622 aaKnown RBP6.6□□□□□ -1.35
GTF3A-208ENST00000493903 SPG7Q9UQ90 795 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 HRH3Q9Y5N1 445 aa6.6□□□□□ -1.35
GTF3A-208ENST00000493903 GIPC1O14908 333 aa6.59□□□□□ -1.35
GTF3A-208ENST00000493903 ZAP70P43403 619 aa6.59□□□□□ -1.35
GTF3A-208ENST00000493903 DNM1Q05193 864 aaKnown RBP6.59□□□□□ -1.35
GTF3A-208ENST00000493903 PTPN12Q05209 780 aaKnown RBP6.59□□□□□ -1.35
GTF3A-208ENST00000493903 RBL2Q08999 1139 aa6.59□□□□□ -1.35
GTF3A-208ENST00000493903 CLN3Q13286 438 aa6.59□□□□□ -1.35
GTF3A-208ENST00000493903 TLR1Q15399 786 aa6.59□□□□□ -1.35
GTF3A-208ENST00000493903 ETFBKMTQ8IXQ9 262 aa6.59□□□□□ -1.35
GTF3A-208ENST00000493903 ANKRD13AQ8IZ07 590 aa6.59□□□□□ -1.35
GTF3A-208ENST00000493903 ALDH16A1Q8IZ83 802 aa6.59□□□□□ -1.35
GTF3A-208ENST00000493903 RNF217Q8TC41 542 aa6.59□□□□□ -1.35
GTF3A-208ENST00000493903 ZNF775Q96BV0 537 aaPredicted RBP6.59□□□□□ -1.35
GTF3A-208ENST00000493903 DNAJC2Q99543 621 aaKnown RBP6.59□□□□□ -1.35
GTF3A-208ENST00000493903 FAM13BQ9NYF5 915 aa6.59□□□□□ -1.35
GTF3A-208ENST00000493903 TMA7Q9Y2S6 64 aaKnown RBP6.59□□□□□ -1.35
GTF3A-208ENST00000493903 IL2RAP01589 272 aa6.58□□□□□ -1.36
GTF3A-208ENST00000493903 NOS2P35228 1153 aa6.58□□□□□ -1.36
GTF3A-208ENST00000493903 GTF2F1P35269 517 aaKnown RBP eCLIP6.58□□□□□ -1.36
GTF3A-208ENST00000493903 ARID5AQ03989 594 aa6.58□□□□□ -1.36
GTF3A-208ENST00000493903 FAM26DQ5JW98 314 aa6.58□□□□□ -1.36
GTF3A-208ENST00000493903 DHX38Q92620 1227 aaKnown RBP6.58□□□□□ -1.36
GTF3A-208ENST00000493903 IFT43Q96FT9 208 aa6.58□□□□□ -1.36
GTF3A-208ENST00000493903 HIRIP3Q9BW71 556 aaPredicted RBP6.58□□□□□ -1.36
GTF3A-208ENST00000493903 EIF1AYO14602 144 aaKnown RBP6.57□□□□□ -1.36
GTF3A-208ENST00000493903 CTSHP09668 335 aa6.57□□□□□ -1.36
GTF3A-208ENST00000493903 EIF4BP23588 611 aaKnown RBP6.57□□□□□ -1.36
GTF3A-208ENST00000493903 RNF144AP50876 292 aaPredicted RBP6.57□□□□□ -1.36
GTF3A-208ENST00000493903 DGKZQ13574 1117 aa6.57□□□□□ -1.36
GTF3A-208ENST00000493903 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.57□□□□□ -1.364e-7■□□□□ 10.1
GTF3A-208ENST00000493903 C1orf53Q5VUE5 145 aa6.57□□□□□ -1.36
GTF3A-208ENST00000493903 VPS37DQ86XT2 251 aa6.57□□□□□ -1.36
GTF3A-208ENST00000493903 TTC16Q8NEE8 873 aa6.57□□□□□ -1.36
GTF3A-208ENST00000493903 CNKSR1Q969H4 720 aa6.57□□□□□ -1.36
GTF3A-208ENST00000493903 NGLY1Q96IV0 654 aa6.57□□□□□ -1.36
GTF3A-208ENST00000493903 NLRP3Q96P20 1036 aa6.57□□□□□ -1.36
GTF3A-208ENST00000493903 INPP5FQ9Y2H2 1132 aa6.57□□□□□ -1.36
GTF3A-208ENST00000493903 USP3Q9Y6I4 520 aa6.57□□□□□ -1.36
GTF3A-208ENST00000493903 TLDC2A0PJX2 215 aa6.56□□□□□ -1.36
GTF3A-208ENST00000493903 ANKRD62A6NC57 917 aa6.56□□□□□ -1.36
GTF3A-208ENST00000493903 VEGFBP49765 207 aa6.56□□□□□ -1.36
GTF3A-208ENST00000493903 HS2ST1Q7LGA3 356 aa6.56□□□□□ -1.36
GTF3A-208ENST00000493903 PRICKLE2Q7Z3G6 844 aa6.56□□□□□ -1.36
GTF3A-208ENST00000493903 ZNF295-AS1Q8N0V1 137 aa6.56□□□□□ -1.36
GTF3A-208ENST00000493903 ZNF232Q9UNY5 417 aa6.56□□□□□ -1.36
GTF3A-208ENST00000493903 USP31Q70CQ4 1352 aa6.56□□□□□ -1.36
GTF3A-208ENST00000493903 CPNE3O75131 537 aaKnown RBP6.55□□□□□ -1.36
GTF3A-208ENST00000493903 DNAJA1P31689 397 aaKnown RBP6.55□□□□□ -1.36
GTF3A-208ENST00000493903 TNNI2P48788 182 aa6.55□□□□□ -1.36
GTF3A-208ENST00000493903 ORC1Q13415 861 aa6.55□□□□□ -1.36
GTF3A-208ENST00000493903 HIF1AQ16665 826 aa6.55□□□□□ -1.36
GTF3A-208ENST00000493903 CCDC144BQ3MJ40 725 aa6.55□□□□□ -1.36
GTF3A-208ENST00000493903 SLC27A3Q5K4L6 730 aa6.55□□□□□ -1.36
GTF3A-208ENST00000493903 LYSMD3Q7Z3D4 306 aa6.55□□□□□ -1.36
GTF3A-208ENST00000493903 USP48Q86UV5 1035 aa6.55□□□□□ -1.36
GTF3A-208ENST00000493903 ZDHHC1Q8WTX9 485 aa6.55□□□□□ -1.36
GTF3A-208ENST00000493903 L3MBTL2Q969R5 705 aa6.55□□□□□ -1.36
GTF3A-208ENST00000493903 CABP1Q9NZU7 370 aa6.55□□□□□ -1.36
GTF3A-208ENST00000493903 GPC1P35052 558 aa6.54□□□□□ -1.36
GTF3A-208ENST00000493903 CENPCQ03188 943 aa6.54□□□□□ -1.36
GTF3A-208ENST00000493903 PTSQ03393 145 aa6.54□□□□□ -1.36
GTF3A-208ENST00000493903 PPARGC1BQ86YN6 1023 aaKnown RBP6.54□□□□□ -1.36
GTF3A-208ENST00000493903 TREML1Q86YW5 311 aa6.54□□□□□ -1.36
GTF3A-208ENST00000493903 NUDT16Q96DE0 195 aaKnown RBP6.54□□□□□ -1.36
GTF3A-208ENST00000493903 PHACTR1Q9C0D0 580 aa6.54□□□□□ -1.36
GTF3A-208ENST00000493903 FHDC1Q9C0D6 1143 aaPredicted RBP6.54□□□□□ -1.36
GTF3A-208ENST00000493903 GRIP2Q9C0E4 1043 aa6.54□□□□□ -1.36
GTF3A-208ENST00000493903 C12orf49Q9H741 205 aa6.54□□□□□ -1.36
GTF3A-208ENST00000493903 SRA1Q9HD15 236 aaKnown RBP6.54□□□□□ -1.36
GTF3A-208ENST00000493903 KLK14Q9P0G3 267 aa6.54□□□□□ -1.36
GTF3A-208ENST00000493903 NXF1Q9UBU9 619 aaKnown RBP6.54□□□□□ -1.36
GTF3A-208ENST00000493903 HCN4Q9Y3Q4 1203 aa6.54□□□□□ -1.36
GTF3A-208ENST00000493903 SENP3-EIF4A1A0A087X0R7 540 aa6.53□□□□□ -1.36
GTF3A-208ENST00000493903 TERTO14746 1132 aaKnown RBP6.53□□□□□ -1.36
GTF3A-208ENST00000493903 RHOQP17081 205 aa6.53□□□□□ -1.36
GTF3A-208ENST00000493903 ST13P50502 369 aaKnown RBP6.53□□□□□ -1.36
GTF3A-208ENST00000493903 RACK1P63244 317 aaKnown RBP6.53□□□□□ -1.36
GTF3A-208ENST00000493903 ZNF394Q53GI3 561 aa6.53□□□□□ -1.36
GTF3A-208ENST00000493903 SH3PXD2AQ5TCZ1 1133 aa6.53□□□□□ -1.36
GTF3A-208ENST00000493903 GPR152Q8TDT2 470 aa6.53□□□□□ -1.36
GTF3A-208ENST00000493903 NIFKQ9BYG3 293 aaKnown RBP6.53□□□□□ -1.36
GTF3A-208ENST00000493903 SRCIN1Q9C0H9 1055 aa6.53□□□□□ -1.36
GTF3A-208ENST00000493903 GGNBP2Q9H3C7 697 aa6.53□□□□□ -1.36
GTF3A-208ENST00000493903 GJA8P48165 433 aa6.52□□□□□ -1.37
GTF3A-208ENST00000493903 POU4F2Q12837 409 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms