RNA–Protein interactions for RNA: ENST00000484377.5

TMEM50B-209, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-209ENST00000484377 NHSQ6T4R5 1651 aa12.06□□□□□ -0.48
TMEM50B-209ENST00000484377 ADAMTS7Q9UKP4 1686 aa12.06□□□□□ -0.48
TMEM50B-209ENST00000484377 KDM6AO15550 1401 aaPredicted RBP12.06□□□□□ -0.48
TMEM50B-209ENST00000484377 EXOC5O00471 708 aa12.06□□□□□ -0.48
TMEM50B-209ENST00000484377 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
TMEM50B-209ENST00000484377 ANP32CO43423 234 aa12.06□□□□□ -0.48
TMEM50B-209ENST00000484377 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
TMEM50B-209ENST00000484377 U2AF1Q01081 240 aaKnown RBP eCLIP12.06□□□□□ -0.485e-19■■■□□ 18.8
TMEM50B-209ENST00000484377 TATDN2Q93075 761 aa12.06□□□□□ -0.48
TMEM50B-209ENST00000484377 PLEKHF1Q96S99 279 aa12.06□□□□□ -0.48
TMEM50B-209ENST00000484377 PLEKHG2Q9H7P9 1386 aa12.05□□□□□ -0.48
TMEM50B-209ENST00000484377 VIRMAQ69YN4 1812 aaKnown RBP12.05□□□□□ -0.48
TMEM50B-209ENST00000484377 GABBR2O75899 941 aa12.05□□□□□ -0.48
TMEM50B-209ENST00000484377 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
TMEM50B-209ENST00000484377 PDE3BQ13370 1112 aa12.05□□□□□ -0.48
TMEM50B-209ENST00000484377 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
TMEM50B-209ENST00000484377 CCDC27Q2M243 656 aa12.05□□□□□ -0.48
TMEM50B-209ENST00000484377 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
TMEM50B-209ENST00000484377 DDX54Q8TDD1 881 aaKnown RBP12.05□□□□□ -0.48
TMEM50B-209ENST00000484377 TSKSQ9UJT2 592 aa12.05□□□□□ -0.48
TMEM50B-209ENST00000484377 ITGB4P16144 1822 aa12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 DLG5Q8TDM6 1919 aa12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 PALM3A6NDB9 673 aaPredicted RBP12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 KCNQ2O43526 872 aa12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 PHKG2P15735 406 aa12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 COL9A1P20849 921 aa12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 CTDSPL2Q05D32 466 aa12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 MTHFSDQ2M296 383 aaKnown RBP12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 ARSIQ5FYB1 569 aa12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 ZNF428Q96B54 188 aa12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 ADAMTS8Q9UP79 889 aa12.04□□□□□ -0.48
TMEM50B-209ENST00000484377 SCN11AQ9UI33 1791 aa12.03□□□□□ -0.48
TMEM50B-209ENST00000484377 BTAF1O14981 1849 aa12.03□□□□□ -0.48
TMEM50B-209ENST00000484377 PPP1R3GB7ZBB8 358 aa12.03□□□□□ -0.48
TMEM50B-209ENST00000484377 HOXA2O43364 376 aa12.03□□□□□ -0.48
TMEM50B-209ENST00000484377 PTPREP23469 700 aa12.03□□□□□ -0.48
TMEM50B-209ENST00000484377 PNISRQ8TF01 805 aaKnown RBP12.03□□□□□ -0.48
TMEM50B-209ENST00000484377 IVNS1ABPQ9Y6Y0 642 aa12.03□□□□□ -0.48
TMEM50B-209ENST00000484377 PCDH11XQ9BZA7 1347 aa12.03□□□□□ -0.48
TMEM50B-209ENST00000484377 PCDH11YQ9BZA8 1340 aa12.03□□□□□ -0.48
TMEM50B-209ENST00000484377 SOX11P35716 441 aa12.02□□□□□ -0.49
TMEM50B-209ENST00000484377 ZNF530Q6P9A1 599 aaPredicted RBP12.02□□□□□ -0.49
TMEM50B-209ENST00000484377 PNMA1Q8ND90 353 aa12.02□□□□□ -0.49
TMEM50B-209ENST00000484377 VRTNQ9H8Y1 702 aa12.02□□□□□ -0.49
TMEM50B-209ENST00000484377 HMX1Q9NP08 348 aaPredicted RBP12.02□□□□□ -0.49
TMEM50B-209ENST00000484377 KAT6BQ8WYB5 2073 aa12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 TRIM37O94972 964 aa12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 GCGRP47871 477 aa12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 SEMA3FQ13275 785 aa12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 MTMR2Q13614 643 aa12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 FAM196AQ6ZSG2 479 aa12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 KHSRPQ92945 711 aaKnown RBP eCLIP12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 MRS2Q9HD23 443 aa12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 TFIP11Q9UBB9 837 aaKnown RBP12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 NUDCQ9Y266 331 aa12.01□□□□□ -0.49
TMEM50B-209ENST00000484377 SIPA1L3O60292 1781 aaPredicted RBP12□□□□□ -0.49
TMEM50B-209ENST00000484377 TRIM6-TRIM34B2RNG4 842 aa12□□□□□ -0.49
TMEM50B-209ENST00000484377 PLEKHO1Q53GL0 409 aaPredicted RBP12□□□□□ -0.49
TMEM50B-209ENST00000484377 CCDC146Q8IYE0 955 aa12□□□□□ -0.49
TMEM50B-209ENST00000484377 TRIM34Q9BYJ4 488 aa12□□□□□ -0.49
TMEM50B-209ENST00000484377 ALG2Q9H553 416 aa12□□□□□ -0.49
TMEM50B-209ENST00000484377 BCL2L12Q9HB09 334 aa12□□□□□ -0.49
TMEM50B-209ENST00000484377 SPG7Q9UQ90 795 aa12□□□□□ -0.49
TMEM50B-209ENST00000484377 MRC1P22897 1456 aa12□□□□□ -0.49
TMEM50B-209ENST00000484377 AMOTQ4VCS5 1084 aa11.99□□□□□ -0.49
TMEM50B-209ENST00000484377 LGR6Q9HBX8 967 aa11.99□□□□□ -0.49
TMEM50B-209ENST00000484377 MAP3K5Q99683 1374 aa11.98□□□□□ -0.49
TMEM50B-209ENST00000484377 SENP3-EIF4A1A0A087X0R7 540 aa11.98□□□□□ -0.49
TMEM50B-209ENST00000484377 CARNS1A5YM72 827 aa11.98□□□□□ -0.49
TMEM50B-209ENST00000484377 B4GALNT3Q6L9W6 998 aa11.98□□□□□ -0.49
TMEM50B-209ENST00000484377 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
TMEM50B-209ENST00000484377 DEFB132Q7Z7B7 95 aa11.98□□□□□ -0.49
TMEM50B-209ENST00000484377 IFNL2Q8IZJ0 200 aa11.98□□□□□ -0.49
TMEM50B-209ENST00000484377 IL17REQ8NFR9 667 aa11.98□□□□□ -0.49
TMEM50B-209ENST00000484377 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
TMEM50B-209ENST00000484377 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
TMEM50B-209ENST00000484377 GRIPAP1Q4V328 841 aa11.97□□□□□ -0.49
TMEM50B-209ENST00000484377 SND1Q7KZF4 910 aaKnown RBP eCLIP11.97□□□□□ -0.49
TMEM50B-209ENST00000484377 LRRN4Q8WUT4 740 aa11.97□□□□□ -0.49
TMEM50B-209ENST00000484377 LY75O60449 1722 aa11.97□□□□□ -0.49
TMEM50B-209ENST00000484377 RREB1Q92766 1687 aa11.97□□□□□ -0.49
TMEM50B-209ENST00000484377 CEMIPQ8WUJ3 1361 aa11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 ATG7O95352 703 aa11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 SLC4A3P48751 1232 aa11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 DCTN1Q14203 1278 aa11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 WDR43Q15061 677 aaKnown RBP eCLIP11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 AKAP4Q5JQC9 854 aa11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 PIGBQ92521 554 aa11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 PCDHGC3Q9UN70 934 aa11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 RRP7AQ9Y3A4 280 aaKnown RBP11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 RGPD3A6NKT7 1758 aaPredicted RBP11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 RGPD4Q7Z3J3 1758 aa11.96□□□□□ -0.49
TMEM50B-209ENST00000484377 NUP188Q5SRE5 1749 aa11.95□□□□□ -0.5
TMEM50B-209ENST00000484377 C3orf80F5H4A9 247 aa11.95□□□□□ -0.5
TMEM50B-209ENST00000484377 C6orf229H3BNL8 230 aa11.95□□□□□ -0.5
TMEM50B-209ENST00000484377 CCER2I3L3R5 266 aa11.95□□□□□ -0.5
TMEM50B-209ENST00000484377 SMAPO00193 183 aa11.95□□□□□ -0.5
TMEM50B-209ENST00000484377 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms