RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 LRRC4BQ9NT99 713 aa9.32□□□□□ -0.92
TTC39B-203ENST00000380853 EMILIN1Q9Y6C2 1016 aa9.32□□□□□ -0.92
TTC39B-203ENST00000380853 NSD2O96028 1365 aa9.32□□□□□ -0.92
TTC39B-203ENST00000380853 SLC10A3P09131 477 aa9.31□□□□□ -0.92
TTC39B-203ENST00000380853 CCER1Q8TC90 406 aaPredicted RBP9.31□□□□□ -0.92
TTC39B-203ENST00000380853 SLC16A10Q8TF71 515 aa9.31□□□□□ -0.92
TTC39B-203ENST00000380853 HMGB2P26583 209 aaKnown RBP9.31□□□□□ -0.92
TTC39B-203ENST00000380853 KCNQ4P56696 695 aa9.31□□□□□ -0.92
TTC39B-203ENST00000380853 SYT17Q9BSW7 474 aa9.31□□□□□ -0.92
TTC39B-203ENST00000380853 MAP2P11137 1827 aaKnown RBP9.3□□□□□ -0.92
TTC39B-203ENST00000380853 TOGARAM1Q9Y4F4 1720 aa9.3□□□□□ -0.92
TTC39B-203ENST00000380853 PALLDQ8WX93 1383 aa9.3□□□□□ -0.92
TTC39B-203ENST00000380853 PNPLA7Q6ZV29 1317 aa9.3□□□□□ -0.92
TTC39B-203ENST00000380853 EIF4G2P78344 907 aaKnown RBP eCLIP9.3□□□□□ -0.92
TTC39B-203ENST00000380853 CARD14Q9BXL6 1004 aa9.3□□□□□ -0.92
TTC39B-203ENST00000380853 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
TTC39B-203ENST00000380853 SPG7Q9UQ90 795 aa9.3□□□□□ -0.92
TTC39B-203ENST00000380853 ITGB4P16144 1822 aa9.29□□□□□ -0.92
TTC39B-203ENST00000380853 MAP3K5Q99683 1374 aa9.29□□□□□ -0.92
TTC39B-203ENST00000380853 TNNT2P45379 298 aaPredicted RBP9.29□□□□□ -0.92
TTC39B-203ENST00000380853 MPRIPQ6WCQ1 1025 aa9.29□□□□□ -0.92
TTC39B-203ENST00000380853 SMARCC1Q92922 1105 aaPredicted RBP9.29□□□□□ -0.92
TTC39B-203ENST00000380853 AAASQ9NRG9 546 aa9.29□□□□□ -0.92
TTC39B-203ENST00000380853 NR1I2O75469 434 aa9.28□□□□□ -0.92
TTC39B-203ENST00000380853 GPR162Q16538 588 aa9.28□□□□□ -0.92
TTC39B-203ENST00000380853 KCNV2Q8TDN2 545 aa9.28□□□□□ -0.92
TTC39B-203ENST00000380853 AK7Q96M32 723 aa9.28□□□□□ -0.92
TTC39B-203ENST00000380853 CHD4Q14839 1912 aa9.27□□□□□ -0.92
TTC39B-203ENST00000380853 TAF1LQ8IZX4 1826 aa9.27□□□□□ -0.93
TTC39B-203ENST00000380853 WASHC2AQ641Q2 1341 aa9.27□□□□□ -0.93
TTC39B-203ENST00000380853 C4BP0C0L5 1744 aa9.27□□□□□ -0.93
TTC39B-203ENST00000380853 HSPA5P11021 654 aaKnown RBP9.27□□□□□ -0.93
TTC39B-203ENST00000380853 PUS10Q3MIT2 529 aaKnown RBP9.27□□□□□ -0.93
TTC39B-203ENST00000380853 MSL1Q68DK7 614 aa9.27□□□□□ -0.93
TTC39B-203ENST00000380853 NCAPD2Q15021 1401 aa9.26□□□□□ -0.93
TTC39B-203ENST00000380853 COL24A1Q17RW2 1714 aa9.26□□□□□ -0.93
TTC39B-203ENST00000380853 CYP27B1O15528 508 aa9.26□□□□□ -0.93
TTC39B-203ENST00000380853 FOXC1Q12948 553 aa9.26□□□□□ -0.93
TTC39B-203ENST00000380853 FLAD1Q8NFF5 587 aa9.26□□□□□ -0.93
TTC39B-203ENST00000380853 ARHGEF1Q92888 912 aaKnown RBP9.26□□□□□ -0.93
TTC39B-203ENST00000380853 TMOD3Q9NYL9 352 aa9.26□□□□□ -0.93
TTC39B-203ENST00000380853 PKD2L1Q9P0L9 805 aa9.26□□□□□ -0.93
TTC39B-203ENST00000380853 COL23A1Q86Y22 540 aaPredicted RBP9.25□□□□□ -0.93
TTC39B-203ENST00000380853 SCUBE3Q8IX30 993 aa9.25□□□□□ -0.93
TTC39B-203ENST00000380853 IFNL2Q8IZJ0 200 aa9.25□□□□□ -0.93
TTC39B-203ENST00000380853 POLKQ9UBT6 870 aa9.25□□□□□ -0.93
TTC39B-203ENST00000380853 EIF4A2Q14240 407 aaKnown RBP9.24□□□□□ -0.93
TTC39B-203ENST00000380853 LCE2AQ5TA79 106 aaPredicted RBP9.24□□□□□ -0.93
TTC39B-203ENST00000380853 MORC1Q86VD1 984 aa9.24□□□□□ -0.93
TTC39B-203ENST00000380853 PANK3Q9H999 370 aa9.24□□□□□ -0.93
TTC39B-203ENST00000380853 UBR3Q6ZT12 1888 aa9.23□□□□□ -0.93
TTC39B-203ENST00000380853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
TTC39B-203ENST00000380853 HSP90AB1P08238 724 aaKnown RBP9.23□□□□□ -0.93
TTC39B-203ENST00000380853 PHKG2P15735 406 aa9.23□□□□□ -0.93
TTC39B-203ENST00000380853 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
TTC39B-203ENST00000380853 SPSB2Q99619 263 aa9.23□□□□□ -0.93
TTC39B-203ENST00000380853 DACH1Q9UI36 760 aa9.23□□□□□ -0.93
TTC39B-203ENST00000380853 KNSTRNQ9Y448 316 aa9.23□□□□□ -0.93
TTC39B-203ENST00000380853 PLEKHG2Q9H7P9 1386 aa9.23□□□□□ -0.93
TTC39B-203ENST00000380853 LOC102724428A0A0B4J2F2 783 aa9.22□□□□□ -0.93
TTC39B-203ENST00000380853 GNPATO15228 680 aa9.22□□□□□ -0.93
TTC39B-203ENST00000380853 SIK1P57059 783 aa9.22□□□□□ -0.93
TTC39B-203ENST00000380853 PLEKHO1Q53GL0 409 aaPredicted RBP9.22□□□□□ -0.93
TTC39B-203ENST00000380853 ZNF784Q8NCA9 323 aaPredicted RBP9.22□□□□□ -0.93
TTC39B-203ENST00000380853 NLGN2Q8NFZ4 835 aa9.22□□□□□ -0.93
TTC39B-203ENST00000380853 PIGBQ92521 554 aa9.22□□□□□ -0.93
TTC39B-203ENST00000380853 IGSF1Q8N6C5 1336 aa9.21□□□□□ -0.93
TTC39B-203ENST00000380853 ATP6V1AP38606 617 aa9.21□□□□□ -0.94
TTC39B-203ENST00000380853 C1orf141Q5JVX7 400 aa9.21□□□□□ -0.94
TTC39B-203ENST00000380853 ZNF530Q6P9A1 599 aaPredicted RBP9.21□□□□□ -0.94
TTC39B-203ENST00000380853 PXYLP1Q8TE99 480 aa9.21□□□□□ -0.94
TTC39B-203ENST00000380853 GRIN3BO60391 1043 aa9.2□□□□□ -0.94
TTC39B-203ENST00000380853 SSFA2P28290 1259 aa9.2□□□□□ -0.94
TTC39B-203ENST00000380853 LINC00116Q8NCU8 138 aa9.2□□□□□ -0.94
TTC39B-203ENST00000380853 FCHSD2O94868 740 aa9.19□□□□□ -0.94
TTC39B-203ENST00000380853 CABP4P57796 275 aa9.19□□□□□ -0.94
TTC39B-203ENST00000380853 AMOTQ4VCS5 1084 aa9.19□□□□□ -0.94
TTC39B-203ENST00000380853 TSHZ2Q9NRE2 1034 aa9.19□□□□□ -0.94
TTC39B-203ENST00000380853 ASAP1Q9ULH1 1129 aa9.19□□□□□ -0.94
TTC39B-203ENST00000380853 CD2APQ9Y5K6 639 aa9.19□□□□□ -0.94
TTC39B-203ENST00000380853 KDRP35968 1356 aa9.18□□□□□ -0.94
TTC39B-203ENST00000380853 ITPK1Q13572 414 aa9.18□□□□□ -0.94
TTC39B-203ENST00000380853 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
TTC39B-203ENST00000380853 DCAF5Q96JK2 942 aa9.18□□□□□ -0.94
TTC39B-203ENST00000380853 FCF1Q9Y324 198 aaKnown RBP9.18□□□□□ -0.94
TTC39B-203ENST00000380853 SRCAPQ6ZRS2 3230 aa9.17□□□□□ -0.94
TTC39B-203ENST00000380853 ERVV-2B6SEH9 535 aa9.17□□□□□ -0.94
TTC39B-203ENST00000380853 GIGYF1O75420 1035 aaPredicted RBP9.17□□□□□ -0.94
TTC39B-203ENST00000380853 YBX3P16989 372 aaKnown RBP eCLIP9.17□□□□□ -0.94
TTC39B-203ENST00000380853 MTHFSP49914 203 aa9.17□□□□□ -0.94
TTC39B-203ENST00000380853 SULT6B1Q6IMI4 303 aa9.17□□□□□ -0.94
TTC39B-203ENST00000380853 AEBP1Q8IUX7 1158 aa9.17□□□□□ -0.94
TTC39B-203ENST00000380853 ATG3Q9NT62 314 aa9.17□□□□□ -0.94
TTC39B-203ENST00000380853 TOR4AQ9NXH8 423 aa9.17□□□□□ -0.94
TTC39B-203ENST00000380853 RTCBQ9Y3I0 505 aaKnown RBP9.17□□□□□ -0.94
TTC39B-203ENST00000380853 KDM6AO15550 1401 aaPredicted RBP9.17□□□□□ -0.94
TTC39B-203ENST00000380853 COL5A3P25940 1745 aaPredicted RBP9.17□□□□□ -0.94
TTC39B-203ENST00000380853 KIF7Q2M1P5 1343 aa9.17□□□□□ -0.94
TTC39B-203ENST00000380853 ZNF831Q5JPB2 1677 aa9.16□□□□□ -0.94
TTC39B-203ENST00000380853 SENP3-EIF4A1A0A087X0R7 540 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms