RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
TTC39B-203ENST00000380853 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
TTC39B-203ENST00000380853 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
TTC39B-203ENST00000380853 PHF23Q9BUL5 403 aaPredicted RBP21.41■■□□□ 1.02
TTC39B-203ENST00000380853 FOXD1Q16676 465 aa20.3■□□□□ 0.84
TTC39B-203ENST00000380853 POTEDQ86YR6 584 aa19.06■□□□□ 0.64
TTC39B-203ENST00000380853 MSH5O43196 834 aa19.04■□□□□ 0.64
TTC39B-203ENST00000380853 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
TTC39B-203ENST00000380853 PIAS4Q8N2W9 510 aaPredicted RBP18.92■□□□□ 0.62
TTC39B-203ENST00000380853 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
TTC39B-203ENST00000380853 ADRA2BP18089 450 aa18.74■□□□□ 0.59
TTC39B-203ENST00000380853 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
TTC39B-203ENST00000380853 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
TTC39B-203ENST00000380853 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
TTC39B-203ENST00000380853 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
TTC39B-203ENST00000380853 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
TTC39B-203ENST00000380853 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
TTC39B-203ENST00000380853 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
TTC39B-203ENST00000380853 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
TTC39B-203ENST00000380853 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
TTC39B-203ENST00000380853 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
TTC39B-203ENST00000380853 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
TTC39B-203ENST00000380853 C1QBPQ07021 282 aaKnown RBP15.96■□□□□ 0.15
TTC39B-203ENST00000380853 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
TTC39B-203ENST00000380853 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
TTC39B-203ENST00000380853 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
TTC39B-203ENST00000380853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
TTC39B-203ENST00000380853 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
TTC39B-203ENST00000380853 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
TTC39B-203ENST00000380853 KCNA4P22459 653 aa15.2■□□□□ 0.02
TTC39B-203ENST00000380853 CAPN15O75808 1086 aa15.19■□□□□ 0.02
TTC39B-203ENST00000380853 DSG3P32926 999 aa15.15■□□□□ 0.02
TTC39B-203ENST00000380853 CCDC180Q9P1Z9 1646 aa15.12■□□□□ 0.01
TTC39B-203ENST00000380853 SLC4A2P04920 1241 aa15.06■□□□□ 0
TTC39B-203ENST00000380853 ABCC9O60706 1549 aa15.04■□□□□ -0
TTC39B-203ENST00000380853 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
TTC39B-203ENST00000380853 POTEHQ6S545 545 aa14.89□□□□□ -0.03
TTC39B-203ENST00000380853 ABCB7O75027 752 aa14.86□□□□□ -0.03
TTC39B-203ENST00000380853 ZNF219Q9P2Y4 722 aaPredicted RBP14.81□□□□□ -0.04
TTC39B-203ENST00000380853 APLP2Q06481 763 aa14.8□□□□□ -0.04
TTC39B-203ENST00000380853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.74□□□□□ -0.05
TTC39B-203ENST00000380853 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
TTC39B-203ENST00000380853 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
TTC39B-203ENST00000380853 MYCNP04198 464 aaPredicted RBP14.49□□□□□ -0.09
TTC39B-203ENST00000380853 POLA2Q14181 598 aa14.42□□□□□ -0.1
TTC39B-203ENST00000380853 RBM42Q9BTD8 480 aaKnown RBP14.41□□□□□ -0.1
TTC39B-203ENST00000380853 RB1CC1Q8TDY2 1594 aa14.36□□□□□ -0.11
TTC39B-203ENST00000380853 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.12
TTC39B-203ENST00000380853 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
TTC39B-203ENST00000380853 NACADO15069 1562 aa14.25□□□□□ -0.13
TTC39B-203ENST00000380853 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
TTC39B-203ENST00000380853 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
TTC39B-203ENST00000380853 DCAF8L2P0C7V8 631 aa14.18□□□□□ -0.14
TTC39B-203ENST00000380853 ZBTB12Q9Y330 459 aaPredicted RBP14.04□□□□□ -0.16
TTC39B-203ENST00000380853 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
TTC39B-203ENST00000380853 OSCARQ8IYS5 282 aa14.02□□□□□ -0.17
TTC39B-203ENST00000380853 MYO15BQ96JP2 1530 aa14.01□□□□□ -0.17
TTC39B-203ENST00000380853 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
TTC39B-203ENST00000380853 ZBTB22O15209 634 aa14□□□□□ -0.17
TTC39B-203ENST00000380853 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
TTC39B-203ENST00000380853 ZCCHC6Q5VYS8 1495 aaKnown RBP13.94□□□□□ -0.18
TTC39B-203ENST00000380853 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
TTC39B-203ENST00000380853 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
TTC39B-203ENST00000380853 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
TTC39B-203ENST00000380853 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
TTC39B-203ENST00000380853 SP7Q8TDD2 431 aaPredicted RBP13.83□□□□□ -0.2
TTC39B-203ENST00000380853 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
TTC39B-203ENST00000380853 SCRIBQ14160 1630 aa13.78□□□□□ -0.2
TTC39B-203ENST00000380853 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
TTC39B-203ENST00000380853 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
TTC39B-203ENST00000380853 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.21
TTC39B-203ENST00000380853 HAX1O00165 279 aa13.66□□□□□ -0.22
TTC39B-203ENST00000380853 FBLN2P98095 1184 aa13.63□□□□□ -0.23
TTC39B-203ENST00000380853 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
TTC39B-203ENST00000380853 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
TTC39B-203ENST00000380853 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
TTC39B-203ENST00000380853 CC2D2AQ9P2K1 1620 aa13.59□□□□□ -0.23
TTC39B-203ENST00000380853 EIF4G1Q04637 1599 aaKnown RBP13.56□□□□□ -0.24
TTC39B-203ENST00000380853 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
TTC39B-203ENST00000380853 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
TTC39B-203ENST00000380853 EVX2Q03828 476 aa13.53□□□□□ -0.24
TTC39B-203ENST00000380853 CLEC11AQ9Y240 323 aa13.49□□□□□ -0.25
TTC39B-203ENST00000380853 PRKAR2AP13861 404 aaKnown RBP13.45□□□□□ -0.26
TTC39B-203ENST00000380853 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
TTC39B-203ENST00000380853 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
TTC39B-203ENST00000380853 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
TTC39B-203ENST00000380853 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
TTC39B-203ENST00000380853 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
TTC39B-203ENST00000380853 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
TTC39B-203ENST00000380853 GABBR2O75899 941 aa13.16□□□□□ -0.3
TTC39B-203ENST00000380853 SMARCA4P51532 1647 aa13.12□□□□□ -0.31
TTC39B-203ENST00000380853 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
TTC39B-203ENST00000380853 CSRNP3Q8WYN3 585 aa13.1□□□□□ -0.31
TTC39B-203ENST00000380853 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
TTC39B-203ENST00000380853 ATAD2BQ9ULI0 1458 aa13.08□□□□□ -0.31
TTC39B-203ENST00000380853 HMGXB3Q12766 1538 aa13.07□□□□□ -0.32
TTC39B-203ENST00000380853 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
TTC39B-203ENST00000380853 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
TTC39B-203ENST00000380853 BAZ1BQ9UIG0 1483 aaKnown RBP13.02□□□□□ -0.33
TTC39B-203ENST00000380853 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms