RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 INPP5BP32019 993 aa6.37□□□□□ -1.39
SMCO3-201ENST00000316048 FANCCQ00597 558 aa6.37□□□□□ -1.39
SMCO3-201ENST00000316048 BTLAQ7Z6A9 289 aa6.37□□□□□ -1.39
SMCO3-201ENST00000316048 ZIC5Q96T25 663 aa6.37□□□□□ -1.39
SMCO3-201ENST00000316048 TATP17735 454 aaPredicted RBP6.36□□□□□ -1.39
SMCO3-201ENST00000316048 ARSJQ5FYB0 599 aaPredicted RBP6.36□□□□□ -1.39
SMCO3-201ENST00000316048 ALG1LQ6GMV1 187 aa6.36□□□□□ -1.39
SMCO3-201ENST00000316048 GPAMQ9HCL2 828 aa6.36□□□□□ -1.39
SMCO3-201ENST00000316048 TMEM63CQ9P1W3 806 aa6.36□□□□□ -1.39
SMCO3-201ENST00000316048 RTCBQ9Y3I0 505 aaKnown RBP6.36□□□□□ -1.39
SMCO3-201ENST00000316048 KCNMB2Q9Y691 235 aa6.36□□□□□ -1.39
SMCO3-201ENST00000316048 TNFRSF21O75509 655 aa6.35□□□□□ -1.39
SMCO3-201ENST00000316048 PCSK2P16519 638 aa6.35□□□□□ -1.39
SMCO3-201ENST00000316048 GNA15P30679 374 aa6.35□□□□□ -1.39
SMCO3-201ENST00000316048 ZC3H6P61129 1189 aaKnown RBP6.35□□□□□ -1.39
SMCO3-201ENST00000316048 NAALADL2Q58DX5 795 aa6.35□□□□□ -1.39
SMCO3-201ENST00000316048 MRPL14Q6P1L8 145 aaKnown RBP6.35□□□□□ -1.39
SMCO3-201ENST00000316048 LYSMD3Q7Z3D4 306 aa6.35□□□□□ -1.39
SMCO3-201ENST00000316048 NT5DC4Q86YG4 428 aa6.35□□□□□ -1.39
SMCO3-201ENST00000316048 CMTR1Q8N1G2 835 aaKnown RBP6.35□□□□□ -1.39
SMCO3-201ENST00000316048 UPP2O95045 317 aa6.35□□□□□ -1.39
SMCO3-201ENST00000316048 MSX1P28360 303 aa6.35□□□□□ -1.39
SMCO3-201ENST00000316048 IER5Q5VY09 327 aa6.35□□□□□ -1.39
SMCO3-201ENST00000316048 EPS8L3Q8TE67 593 aaKnown RBP6.35□□□□□ -1.39
SMCO3-201ENST00000316048 PIK3R5Q8WYR1 880 aa6.35□□□□□ -1.39
SMCO3-201ENST00000316048 POLR3DP05423 398 aaPredicted RBP6.34□□□□□ -1.39
SMCO3-201ENST00000316048 ARSDP51689 593 aa6.34□□□□□ -1.39
SMCO3-201ENST00000316048 TYRO3Q06418 890 aa6.34□□□□□ -1.39
SMCO3-201ENST00000316048 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMCO3-201ENST00000316048 C8orf37Q96NL8 207 aa6.34□□□□□ -1.39
SMCO3-201ENST00000316048 BCL11AQ9H165 835 aa6.34□□□□□ -1.39
SMCO3-201ENST00000316048 RUBCNLQ9H714 662 aa6.34□□□□□ -1.39
SMCO3-201ENST00000316048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.34□□□□□ -1.39
SMCO3-201ENST00000316048 TTLL8A6PVC2 850 aa6.34□□□□□ -1.4
SMCO3-201ENST00000316048 CPNE3O75131 537 aaKnown RBP6.34□□□□□ -1.4
SMCO3-201ENST00000316048 TRIM46Q7Z4K8 759 aa6.34□□□□□ -1.4
SMCO3-201ENST00000316048 ZNF438Q7Z4V0 828 aa6.34□□□□□ -1.4
SMCO3-201ENST00000316048 OSBPL7Q9BZF2 842 aa6.34□□□□□ -1.4
SMCO3-201ENST00000316048 TIMMDC1Q9NPL8 285 aa6.34□□□□□ -1.4
SMCO3-201ENST00000316048 A0A1W2PNR3 127 aa6.33□□□□□ -1.4
SMCO3-201ENST00000316048 UBAP1LF5GYI3 381 aa6.33□□□□□ -1.4
SMCO3-201ENST00000316048 TTC16Q8NEE8 873 aa6.33□□□□□ -1.4
SMCO3-201ENST00000316048 FBF1Q8TES7 1133 aa6.33□□□□□ -1.4
SMCO3-201ENST00000316048 NPHS2Q9NP85 383 aa6.33□□□□□ -1.4
SMCO3-201ENST00000316048 CCDC74AQ96AQ1 378 aa6.32□□□□□ -1.4
SMCO3-201ENST00000316048 FAM13BQ9NYF5 915 aa6.32□□□□□ -1.4
SMCO3-201ENST00000316048 A0A1B0GTH6 734 aa6.32□□□□□ -1.4
SMCO3-201ENST00000316048 FAM187AA6NFU0 413 aa6.32□□□□□ -1.4
SMCO3-201ENST00000316048 FGD1P98174 961 aa6.32□□□□□ -1.4
SMCO3-201ENST00000316048 HIF1AQ16665 826 aa6.32□□□□□ -1.4
SMCO3-201ENST00000316048 ZCCHC2Q9C0B9 1178 aaKnown RBP6.32□□□□□ -1.4
SMCO3-201ENST00000316048 CHRDQ9H2X0 955 aa6.32□□□□□ -1.4
SMCO3-201ENST00000316048 ELP3Q9H9T3 547 aa6.32□□□□□ -1.4
SMCO3-201ENST00000316048 DNMT3LQ9UJW3 386 aa6.32□□□□□ -1.4
SMCO3-201ENST00000316048 AK5Q9Y6K8 562 aa6.32□□□□□ -1.4
SMCO3-201ENST00000316048 SOS2Q07890 1332 aaPredicted RBP6.32□□□□□ -1.4
SMCO3-201ENST00000316048 ZNF76P36508 570 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 TNNI2P48788 182 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 MEI1Q5TIA1 1274 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 SNX29Q8TEQ0 813 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 SREK1Q8WXA9 508 aaKnown RBP6.31□□□□□ -1.4
SMCO3-201ENST00000316048 CRELD1Q96HD1 420 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 CEP63Q96MT8 703 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 DNAJC25Q9H1X3 360 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 CNTN3Q9P232 1028 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 PDZRN3Q9UPQ7 1066 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 PCDHGB7Q9Y5F8 929 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 EREGO14944 169 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 ZNF394Q53GI3 561 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 C1orf127Q8N9H9 656 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 RNF34Q969K3 372 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 ACBD3Q9H3P7 528 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 ZFYVE28Q9HCC9 887 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 ANKIB1Q9P2G1 1089 aa6.31□□□□□ -1.4
SMCO3-201ENST00000316048 PPP1R1BQ9UD71 204 aaPredicted RBP6.31□□□□□ -1.4
SMCO3-201ENST00000316048 PHACTR2O75167 634 aa6.3□□□□□ -1.4
SMCO3-201ENST00000316048 XYLBO75191 536 aa6.3□□□□□ -1.4
SMCO3-201ENST00000316048 THBS1P07996 1170 aa6.3□□□□□ -1.4
SMCO3-201ENST00000316048 XKR5Q6UX68 686 aa6.3□□□□□ -1.4
SMCO3-201ENST00000316048 ZFP42Q96MM3 310 aa6.3□□□□□ -1.4
SMCO3-201ENST00000316048 GAS2L1Q99501 681 aaPredicted RBP6.3□□□□□ -1.4
SMCO3-201ENST00000316048 NEUROD4Q9HD90 331 aa6.3□□□□□ -1.4
SMCO3-201ENST00000316048 GPC6Q9Y625 555 aaPredicted RBP6.3□□□□□ -1.4
SMCO3-201ENST00000316048 SENP3-EIF4A1A0A087X0R7 540 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 SOBPA7XYQ1 873 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 GRIN2CQ14957 1233 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 WDR44Q5JSH3 913 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
SMCO3-201ENST00000316048 TINF2Q9BSI4 451 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 BRD7Q9NPI1 651 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 SPG7Q9UQ90 795 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 CYP2E1P05181 493 aaPredicted RBP6.29□□□□□ -1.4
SMCO3-201ENST00000316048 RPLP1P05386 114 aaKnown RBP6.29□□□□□ -1.4
SMCO3-201ENST00000316048 EIF4BP23588 611 aaKnown RBP6.29□□□□□ -1.4
SMCO3-201ENST00000316048 C12orf49Q9H741 205 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 LATS2Q9NRM7 1088 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 KANSL3Q9P2N6 904 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 HCN2Q9UL51 889 aa6.29□□□□□ -1.4
SMCO3-201ENST00000316048 NXPE4Q6UWF7 544 aa6.28□□□□□ -1.4
SMCO3-201ENST00000316048 KRT25Q7Z3Z0 450 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms