RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 PPP1R42Q7Z4L9 355 aa16.93■□□□□ 0.3
APOBEC3A-201ENST00000249116 ZNF34Q8IZ26 560 aa16.93■□□□□ 0.3
APOBEC3A-201ENST00000249116 L3MBTL3Q96JM7 780 aaPredicted RBP16.93■□□□□ 0.3
APOBEC3A-201ENST00000249116 UBN2Q6ZU65 1347 aa16.93■□□□□ 0.3
APOBEC3A-201ENST00000249116 RIC1Q4ADV7 1423 aa16.92■□□□□ 0.3
APOBEC3A-201ENST00000249116 IARSP41252 1262 aaKnown RBP16.92■□□□□ 0.3
APOBEC3A-201ENST00000249116 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
APOBEC3A-201ENST00000249116 SUSD4Q5VX71 490 aa16.92■□□□□ 0.3
APOBEC3A-201ENST00000249116 SYNE4Q8N205 404 aa16.92■□□□□ 0.3
APOBEC3A-201ENST00000249116 PSMD1Q99460 953 aa16.92■□□□□ 0.3
APOBEC3A-201ENST00000249116 MYBBP1AQ9BQG0 1328 aaKnown RBP16.92■□□□□ 0.3
APOBEC3A-201ENST00000249116 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
APOBEC3A-201ENST00000249116 GRIPAP1Q4V328 841 aa16.91■□□□□ 0.3
APOBEC3A-201ENST00000249116 RBM17Q96I25 401 aaKnown RBP16.91■□□□□ 0.3
APOBEC3A-201ENST00000249116 NUP98P52948 1817 aa16.91■□□□□ 0.3
APOBEC3A-201ENST00000249116 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
APOBEC3A-201ENST00000249116 NTSR2O95665 410 aa16.9■□□□□ 0.3
APOBEC3A-201ENST00000249116 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
APOBEC3A-201ENST00000249116 LDHDQ86WU2 507 aa16.9■□□□□ 0.3
APOBEC3A-201ENST00000249116 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
APOBEC3A-201ENST00000249116 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
APOBEC3A-201ENST00000249116 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
APOBEC3A-201ENST00000249116 NLRP3Q96P20 1036 aa16.89■□□□□ 0.29
APOBEC3A-201ENST00000249116 CRAMP1Q96RY5 1269 aa16.89■□□□□ 0.29
APOBEC3A-201ENST00000249116 TAF1DQ9H5J8 278 aaPredicted RBP16.89■□□□□ 0.29
APOBEC3A-201ENST00000249116 HACL1Q9UJ83 578 aa16.89■□□□□ 0.29
APOBEC3A-201ENST00000249116 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
APOBEC3A-201ENST00000249116 FZD9O00144 591 aa16.88■□□□□ 0.29
APOBEC3A-201ENST00000249116 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
APOBEC3A-201ENST00000249116 PDIA6Q15084 440 aa16.88■□□□□ 0.29
APOBEC3A-201ENST00000249116 NEUROD2Q15784 382 aa16.88■□□□□ 0.29
APOBEC3A-201ENST00000249116 UTP14AQ9BVJ6 771 aaKnown RBP16.88■□□□□ 0.29
APOBEC3A-201ENST00000249116 TMX4Q9H1E5 349 aaPredicted RBP16.88■□□□□ 0.29
APOBEC3A-201ENST00000249116 CREBZFQ9NS37 354 aa16.88■□□□□ 0.29
APOBEC3A-201ENST00000249116 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
APOBEC3A-201ENST00000249116 EAPPQ56P03 285 aaPredicted RBP16.87■□□□□ 0.29
APOBEC3A-201ENST00000249116 HSP90AB3PQ58FF7 597 aa16.87■□□□□ 0.29
APOBEC3A-201ENST00000249116 LRP10Q7Z4F1 713 aa16.87■□□□□ 0.29
APOBEC3A-201ENST00000249116 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
APOBEC3A-201ENST00000249116 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
APOBEC3A-201ENST00000249116 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
APOBEC3A-201ENST00000249116 DSG3P32926 999 aa16.87■□□□□ 0.29
APOBEC3A-201ENST00000249116 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
APOBEC3A-201ENST00000249116 GPC2Q8N158 579 aa16.87■□□□□ 0.29
APOBEC3A-201ENST00000249116 SCN4AP35499 1836 aa16.86■□□□□ 0.29
APOBEC3A-201ENST00000249116 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
APOBEC3A-201ENST00000249116 ANXA1P04083 346 aa16.86■□□□□ 0.29
APOBEC3A-201ENST00000249116 EPHX2P34913 555 aa16.86■□□□□ 0.29
APOBEC3A-201ENST00000249116 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
APOBEC3A-201ENST00000249116 PROSER3Q2NL68 480 aa16.86■□□□□ 0.29
APOBEC3A-201ENST00000249116 COPS6Q7L5N1 327 aa16.86■□□□□ 0.29
APOBEC3A-201ENST00000249116 PNMA8AQ86V59 439 aaPredicted RBP16.86■□□□□ 0.29
APOBEC3A-201ENST00000249116 NECTIN2Q92692 538 aa16.86■□□□□ 0.29
APOBEC3A-201ENST00000249116 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
APOBEC3A-201ENST00000249116 CHL1O00533 1208 aa16.85■□□□□ 0.29
APOBEC3A-201ENST00000249116 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
APOBEC3A-201ENST00000249116 SLC10A5Q5PT55 438 aa16.85■□□□□ 0.29
APOBEC3A-201ENST00000249116 LARGE2Q8N3Y3 721 aa16.85■□□□□ 0.29
APOBEC3A-201ENST00000249116 XAGE3Q8WTP9 111 aa16.85■□□□□ 0.29
APOBEC3A-201ENST00000249116 LAS1LQ9Y4W2 734 aaKnown RBP16.85■□□□□ 0.29
APOBEC3A-201ENST00000249116 HSPA1AP0DMV8 641 aaKnown RBP16.84■□□□□ 0.29
APOBEC3A-201ENST00000249116 HSPA1BP0DMV9 641 aaKnown RBP16.84■□□□□ 0.29
APOBEC3A-201ENST00000249116 DDX21Q9NR30 783 aaKnown RBP eCLIP16.84■□□□□ 0.29
APOBEC3A-201ENST00000249116 PASKQ96RG2 1323 aa16.83■□□□□ 0.29
APOBEC3A-201ENST00000249116 LMOD1P29536 600 aaPredicted RBP16.83■□□□□ 0.28
APOBEC3A-201ENST00000249116 COL13A1Q5TAT6 717 aaPredicted RBP16.83■□□□□ 0.28
APOBEC3A-201ENST00000249116 C3orf67Q6ZVT6 689 aa16.83■□□□□ 0.28
APOBEC3A-201ENST00000249116 MKRN1Q9UHC7 482 aaKnown RBP16.83■□□□□ 0.28
APOBEC3A-201ENST00000249116 GJA3Q9Y6H8 435 aa16.83■□□□□ 0.28
APOBEC3A-201ENST00000249116 TCIRG1Q13488 830 aa16.82■□□□□ 0.28
APOBEC3A-201ENST00000249116 NLRP10Q86W26 655 aa16.82■□□□□ 0.28
APOBEC3A-201ENST00000249116 NIM1KQ8IY84 436 aa16.82■□□□□ 0.28
APOBEC3A-201ENST00000249116 VPS33BQ9H267 617 aa16.82■□□□□ 0.28
APOBEC3A-201ENST00000249116 ADAMTS8Q9UP79 889 aa16.82■□□□□ 0.28
APOBEC3A-201ENST00000249116 TRIM35Q9UPQ4 493 aa16.82■□□□□ 0.28
APOBEC3A-201ENST00000249116 ATP6V0A2Q9Y487 856 aa16.82■□□□□ 0.28
APOBEC3A-201ENST00000249116 TMEM88BA6NKF7 163 aa16.81■□□□□ 0.28
APOBEC3A-201ENST00000249116 ITGBL1O95965 494 aaPredicted RBP16.81■□□□□ 0.28
APOBEC3A-201ENST00000249116 HOXB7P09629 217 aa16.81■□□□□ 0.28
APOBEC3A-201ENST00000249116 HDGFL1Q5TGJ6 251 aa16.81■□□□□ 0.28
APOBEC3A-201ENST00000249116 SUPT20HQ8NEM7 779 aa16.81■□□□□ 0.28
APOBEC3A-201ENST00000249116 TRMT112Q9UI30 125 aaKnown RBP16.81■□□□□ 0.28
APOBEC3A-201ENST00000249116 ABCC4O15439 1325 aa16.81■□□□□ 0.28
APOBEC3A-201ENST00000249116 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
APOBEC3A-201ENST00000249116 BBOX1O75936 387 aa16.8■□□□□ 0.28
APOBEC3A-201ENST00000249116 KRT24Q2M2I5 525 aa16.8■□□□□ 0.28
APOBEC3A-201ENST00000249116 SH3TC1Q8TE82 1336 aa16.8■□□□□ 0.28
APOBEC3A-201ENST00000249116 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 CNTROBQ8N137 903 aa16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 CHPF2Q9P2E5 772 aa16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 DBF4Q9UBU7 674 aaPredicted RBP16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 CNTNAP1P78357 1384 aa16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 HCLS1P14317 486 aaPredicted RBP16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 MAP1SQ66K74 1059 aaPredicted RBP16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 SP8Q8IXZ3 490 aa16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 TNS4Q8IZW8 715 aa16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 PLBD2Q8NHP8 589 aa16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
APOBEC3A-201ENST00000249116 COL4A5P29400 1685 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms