RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 NUF2Q9BZD4 464 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 OPA1O60313 960 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 ZNF853P0CG23 659 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 GJC1P36383 396 aa16.69■□□□□ 0.26
SPTLC2-201ENST00000216484 NBPF1Q3BBV0 1214 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 IL1RAPL2Q9NP60 686 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 KCNK9Q9NPC2 374 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 CCDC77Q9BR77 488 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 EXOC1Q9NV70 894 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 CEP85LQ5SZL2 805 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 CCDC25Q86WR0 208 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 GAS8O95995 478 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 CASQ2O14958 399 aaPredicted RBP16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 CIB2O75838 187 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 EEF2P13639 858 aaKnown RBP16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 IDEP14735 1019 aa16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.68■□□□□ 0.26
SPTLC2-201ENST00000216484 SETSIPP0DME0 302 aa16.67■□□□□ 0.26
SPTLC2-201ENST00000216484 HAUS7Q99871 368 aa16.67■□□□□ 0.26
SPTLC2-201ENST00000216484 CCT2P78371 535 aaKnown RBP16.67■□□□□ 0.26
SPTLC2-201ENST00000216484 CCDC171Q6TFL3 1326 aa16.67■□□□□ 0.26
SPTLC2-201ENST00000216484 DDX27Q96GQ7 796 aaKnown RBP16.67■□□□□ 0.26
SPTLC2-201ENST00000216484 VCX3BQ9H321 246 aa16.67■□□□□ 0.26
SPTLC2-201ENST00000216484 TACC3Q9Y6A5 838 aa16.67■□□□□ 0.26
SPTLC2-201ENST00000216484 PHACTR2O75167 634 aa16.67■□□□□ 0.26
SPTLC2-201ENST00000216484 CCDC65Q8IXS2 484 aa16.67■□□□□ 0.26
SPTLC2-201ENST00000216484 PTGS1P23219 599 aa16.67■□□□□ 0.26
SPTLC2-201ENST00000216484 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
SPTLC2-201ENST00000216484 SOGA1O94964 1423 aa16.66■□□□□ 0.26
SPTLC2-201ENST00000216484 GON4LQ3T8J9 2241 aa16.66■□□□□ 0.26
SPTLC2-201ENST00000216484 EBAG9O00559 213 aa16.66■□□□□ 0.26
SPTLC2-201ENST00000216484 LACTBP83111 547 aaPredicted RBP16.66■□□□□ 0.26
SPTLC2-201ENST00000216484 CDCA7LQ96GN5 454 aa16.66■□□□□ 0.26
SPTLC2-201ENST00000216484 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
SPTLC2-201ENST00000216484 PSMD6Q15008 389 aa16.66■□□□□ 0.26
SPTLC2-201ENST00000216484 PCK1P35558 622 aa16.66■□□□□ 0.26
SPTLC2-201ENST00000216484 NUTM2BA6NNL0 878 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 NUTM2EB1AL46 878 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 PLCB3Q01970 1234 aa16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 CTAGE6Q86UF2 777 aa16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 NUTM2AQ8IVF1 878 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 VAT1LQ9HCJ6 419 aa16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 SETDB1Q15047 1291 aa16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 DACT3Q96B18 629 aaPredicted RBP16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 PPP1R12CQ9BZL4 782 aa16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 ARID5AQ03989 594 aa16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 MAK16Q9BXY0 300 aaKnown RBP16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 VPS18Q9P253 973 aa16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 ZNF213O14771 459 aa16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 TCHPQ9BT92 498 aa16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 NUTM1Q86Y26 1132 aa16.65■□□□□ 0.26
SPTLC2-201ENST00000216484 SLC4A8Q2Y0W8 1093 aa16.64■□□□□ 0.26
SPTLC2-201ENST00000216484 ATP2A2P16615 1042 aaKnown RBP16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 TRIM47Q96LD4 638 aa16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 SAMD15Q9P1V8 674 aa16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 UBASH3AP57075 661 aa16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 SIRT1Q96EB6 747 aa16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 ALDH3A1P30838 453 aa16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 KIAA1524Q8TCG1 905 aa16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 PANK2Q9BZ23 570 aa16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 HSPA1LP34931 641 aa16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 C10orf67Q8IYJ2 551 aa16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 FAM169AQ9Y6X4 670 aa16.64■□□□□ 0.25
SPTLC2-201ENST00000216484 AKAP2Q9Y2D5 859 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 LUC7L2Q9Y383 392 aaKnown RBP16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 AKR1B10O60218 316 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 PRPHP41219 470 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 CUL4BQ13620 913 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 PPFIA2O75334 1257 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 GBP1P32455 592 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 UAP1Q16222 522 aaPredicted RBP16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 TBC1D31Q96DN5 1066 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 IFIT3O14879 490 aaKnown RBP16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 UBA7P41226 1012 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 CACNA2D3Q8IZS8 1091 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 VTI1AQ96AJ9 217 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 BACH2Q9BYV9 841 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 BOLA2Q9H3K6 86 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 GOLIM4O00461 696 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 PRPF40BQ6NWY9 871 aaKnown RBP16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 KANK3Q6NY19 840 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 RABGAP1Q9Y3P9 1069 aa16.63■□□□□ 0.25
SPTLC2-201ENST00000216484 RAB11FIP3O75154 756 aa16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 TTF1Q15361 905 aaPredicted RBP16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 N4BP3O15049 544 aa16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 PLEKHH1Q9ULM0 1364 aa16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 INTS8Q75QN2 995 aaKnown RBP16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 HMGB1P09429 215 aaKnown RBP16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 CAPZA3Q96KX2 299 aa16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 PIP4K2BP78356 416 aa16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 PPP1R7Q15435 360 aa16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 TBCAO75347 108 aaKnown RBP16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 ERCC6LQ2NKX8 1250 aa16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 IFT81Q8WYA0 676 aa16.62■□□□□ 0.25
SPTLC2-201ENST00000216484 PPANQ9NQ55 473 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms