RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Nav1Q8CH77 1875 aa16.06■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 ImpactO55091 318 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Sult6b1P0CC03 303 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Gjb2Q00977 226 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Edc3Q8K2D3 508 aaKnown RBP16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Ciao1Q99KN2 339 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Gigyf1Q99MR1 1044 aaKnown RBP16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Dmrtc1Q9D9R7 182 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Ybx3Q9JKB3 361 aaKnown RBP16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Sipa1l3G3X9J0 1776 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Kcnb2A6H8H5 907 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Rasa1E9PYG6 1038 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Zdhhc9P59268 364 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 DbnlQ62418 436 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Sgsm2Q80U12 1005 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Fam102bQ8BQS4 339 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Tmc2Q8R4P4 888 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 ApobrQ8VBT6 942 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Slx4ipQ9D7Y9 413 aa16.05■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Rnf20Q5DTM8 973 aa16.04■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Dmrt2Q8BG36 561 aa16.04■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Ltb4r2Q9JJL9 360 aa16.04■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Hmg20bQ9Z104 317 aa16.04■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Irx3P81067 507 aa16.03■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Dis3l2Q8CI75 870 aaKnown RBP16.03■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Bmp2kQ91Z96 1138 aa16.03■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Psma5Q9Z2U1 241 aaKnown RBP16.03■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Hdac6Q9Z2V5 1149 aa16.03■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Kdm3aQ6PCM1 1323 aa16.03■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Abca3Q8R420 1704 aa16.03■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Akap11E9Q777 1895 aa16.03■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 RubcnlQ3TD16 648 aa16.02■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Sik1Q60670 779 aa16.02■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 Il1rapl2Q9ERS6 686 aa16.02■□□□□ 0.16
Pdlim5-208ENSMUST00000196220 MetP16056 1379 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Rbm8a2A0A0N4SUH6 174 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Fbxl16A2RT62 479 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Prr29B1ARI9 187 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Plcb3P51432 1234 aaKnown RBP16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Gsdma2Q32M21 443 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Tti2Q8BGV4 512 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Atf7Q8R0S1 413 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Tubb6Q922F4 447 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Rbm8aQ9CWZ3 174 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Ppil4Q9CXG3 492 aaKnown RBP16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Cap2Q9CYT6 476 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Q9D9S1 216 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Ak2Q9WTP6 239 aa16.02■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Casz1Q9CWL2 1761 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Arap2Q8BZ05 1703 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Rbbp8nlA2ABX0 614 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Eya2O08575 532 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 AppP12023 770 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 MecomP14404 1042 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Neurod6P48986 337 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Atg9aQ68FE2 551 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Jmjd4Q8BFT6 427 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Tmem266Q8BZB3 538 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 4930504O13RikQ8C5Z9 145 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Gdpd2Q9ESM6 539 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Col4a1P02463 1669 aa16.01■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Elmsan1E9Q2I4 1089 aaKnown RBP16■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Vps33bP59016 617 aa16■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Smim5Q8BT42 78 aa16■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Nek11Q8C0Q4 628 aa16■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Tmx3Q8BXZ1 456 aa15.99■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Rdm1Q9CQK3 281 aa15.99■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Fkbp1aP26883 108 aaKnown RBP15.99■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Syt1P46096 421 aa15.99■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Exoc5Q3TPX4 708 aa15.99■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Ankib1Q6ZPS6 1085 aa15.99■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 DekQ7TNV0 380 aaKnown RBP15.99■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Erc1Q99MI1 1120 aa15.99■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Rufy3Q9D394 469 aa15.99■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Npc1l1Q6T3U4 1333 aa15.98■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Mdm2P23804 489 aa15.98■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Dcaf5Q80T85 946 aa15.98■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Plcd4Q8K3R3 807 aa15.98■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Kndc1Q0KK55 1742 aa15.98■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Kat6bQ8BRB7 1872 aa15.98■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Nol10Q5RJG1 687 aaKnown RBP15.97■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Pm20d1Q8C165 503 aa15.97■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 StrbpQ91WM1 672 aaKnown RBP15.97■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Dhx38Q80X98 1228 aa15.97■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Clca2Q8BG22 942 aa15.97■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Ddx54Q8K4L0 874 aaKnown RBP15.97■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Krt25Q8VCW2 446 aa15.97■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Atp8a2P98200 1148 aa15.96■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 ZyxQ62523 564 aa15.96■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Asap2Q7SIG6 958 aa15.96■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Ankrd23Q812A3 306 aa15.96■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Znf526Q8BI66 675 aa15.96■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Nlrp3Q8R4B8 1033 aa15.96■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Ppp4r3bQ922R5 820 aa15.96■□□□□ 0.15
Pdlim5-208ENSMUST00000196220 Zbtb45Q52KG4 520 aa15.95■□□□□ 0.14
Pdlim5-208ENSMUST00000196220 Smc3Q9CW03 1217 aaKnown RBP15.95■□□□□ 0.14
Pdlim5-208ENSMUST00000196220 Tnrc6cQ3UHC0 1690 aaKnown RBP15.94■□□□□ 0.14
Pdlim5-208ENSMUST00000196220 Spryd3E9Q9B3 442 aa15.94■□□□□ 0.14
Pdlim5-208ENSMUST00000196220 Chmp3Q9CQ10 224 aa15.94■□□□□ 0.14
Pdlim5-208ENSMUST00000196220 Rrs1Q9CYH6 365 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms