RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Ccdc146E9Q9F7 977 aa12.43□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Qser1A2BIE1 1698 aa12.42□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Tbc1d31Q6NXY1 996 aa12.42□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Erc2Q6PH08 957 aa12.42□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Tmem52Q9D702 196 aa12.42□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Dmrtc1Q9D9R7 182 aa12.42□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Rcan3Q9JKK0 239 aa12.42□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Ap3b2Q9JME5 1082 aa12.42□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Gm9992B2RWK3 458 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Kif3aP28741 701 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Mindy4Q3UQI9 744 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Anp32cQ64G17 123 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Unc93aQ710D3 458 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Rps6ka5Q8C050 863 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 AnlnQ8K298 1121 aaKnown RBP12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Nr1h3Q9Z0Y9 445 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Arih1Q9Z1K5 555 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Arhgef28P97433 1693 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 PtprmP28828 1452 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Gm45015A0A140LII9 184 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Gm18336A0A140LIU8 765 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Fam184aE9PW83 1143 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Wdr78E9PYY5 807 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Smarce1O54941 411 aaKnown RBP12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Zdhhc9P59268 364 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Gzf1Q4VBD9 706 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Nr6a1Q64249 495 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Pnma3Q8JZW8 466 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 MypopQ8R4U1 393 aa12.41□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Yeats2Q3TUF7 1407 aa12.4□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Kif20bQ80WE4 1774 aaKnown RBP12.4□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Vwa3bJ9JI28 736 aa12.4□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Hoxb3P09026 433 aa12.4□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Anapc15P60007 132 aa12.4□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Fam13aQ8BGI4 693 aa12.4□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 Sp7Q8VI67 428 aa12.4□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 FanclQ9CR14 375 aa12.4□□□□□ -0.42
Pdlim5-204ENSMUST00000168967 NktrP30415 1453 aa12.39□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Rtf1A2AQ19 715 aaKnown RBP12.39□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Zscan25B2RX31 543 aa12.39□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Hoxb7P09024 217 aa12.39□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Tbc1d30Q69ZT9 766 aa12.39□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Ppp2r2dQ925E7 453 aa12.39□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Usp16Q99LG0 825 aa12.39□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 LlphQ9D945 130 aaKnown RBP12.39□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Zfp777B9EKF4 885 aa12.38□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 MccE9PWI3 1003 aa12.38□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 NexnQ7TPW1 607 aa12.38□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Cdk19Q8BWD8 501 aa12.38□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Cyp46a1Q9WVK8 500 aa12.38□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Syce3B5KM66 88 aa12.38□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Cabp4Q8VHC5 271 aa12.38□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Fcf1Q9CTH6 198 aa12.38□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Kif24Q6NWW5 1356 aa12.38□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Prrc2bQ7TPM1 1486 aaKnown RBP12.37□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Zc3h4Q6ZPZ3 1304 aaKnown RBP12.37□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Rangap1P46061 589 aaKnown RBP12.37□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Noc3lQ8VI84 807 aaKnown RBP12.37□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 SrrtQ99MR6 875 aaKnown RBP12.37□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Dip2cE9PWR4 1557 aa12.37□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Zkscan16A2ALW2 728 aa12.36□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Zkscan2G3X952 960 aa12.36□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Chl1P70232 1209 aa12.36□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Stk26Q99JT2 416 aa12.36□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Kif1aP33173 1695 aa12.36□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 EzrP26040 586 aaKnown RBP12.35□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Nol8Q3UHX0 1147 aaKnown RBP12.35□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Ddx19aQ61655 478 aaKnown RBP12.35□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Filip1lQ6P6L0 1131 aa12.35□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Pcdhb22Q91XZ8 794 aa12.35□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Cep170bQ80U49 1574 aa12.35□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Atp2b2Q9R0K7 1198 aa12.35□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Klhl34A2AI76 644 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Triml2E9PW10 424 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Tnnt2P50752 301 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Strn4P58404 760 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Pacs2Q3V3Q7 862 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Shq1Q7TMX5 569 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 KinQ8K339 391 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 F11Q91Y47 624 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Krtap3-2Q9D638 99 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Ccdc94Q9D6J3 314 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Krtap3-3Q9D7P0 99 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 RereQ80TZ9 1558 aa12.34□□□□□ -0.43
Pdlim5-204ENSMUST00000168967 Pank2Q3U4S0 443 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Cul9Q80TT8 1865 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Grpel1Q99LP6 217 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Q9D2X8 372 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Abca14E9Q8F8 1683 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Adamtsl3G3UXC7 1706 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Ahdc1Q6PAL7 1594 aaKnown RBP12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Atg4a-psA0A0G2JFS9 396 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Cul4bA2A432 970 aaKnown RBP12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 FkbplO35450 347 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 MsnP26041 577 aaKnown RBP12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Hvcn1Q3U2S8 269 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Ctdspl2Q8BG15 465 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Atg4aQ8C9S8 396 aa12.33□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 NpatQ8BMA5 1420 aa12.32□□□□□ -0.44
Pdlim5-204ENSMUST00000168967 Tpm3P21107 285 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms