RNA–Protein interactions for RNA: ENSMUST00000163419.7

Scaf4-202, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scaf4, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-202ENSMUST00000163419 Lrrc7Q80TE7 1490 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Tbc1d9Q3UYK3 1264 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Mctp2Q5RJH2 878 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Gas2l2Q5SSG4 860 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Pcdhb5Q91XZ5 792 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Q9D5Q8 446 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Lmbr1Q9JIT0 490 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Zbtb22Q9Z0G7 638 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Dok7Q18PE0 504 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Pdzd9Q9D9M4 266 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Gtpbp6Q3U6U5 514 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 DymQ8CHY3 669 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 ZwintQ9CQU5 252 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Hs6st3Q9QYK4 470 aa13.5□□□□□ -0.25
Scaf4-202ENSMUST00000163419 HmmrQ00547 794 aaKnown RBP13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Txndc16Q7TN22 820 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Ccdc158Q8CDI6 1109 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Gcom1E9PZ54 550 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 MyzapQ3UIJ9 466 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Gm12185Q5NCB2 835 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Rrp12Q6P5B0 1295 aaKnown RBP13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Ipo4Q8VI75 1082 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Nol7Q9D7Z3 254 aaKnown RBP13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Pik3ap1Q9EQ32 811 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Pdcd6ipQ9WU78 869 aaKnown RBP13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Ccdc173A0JLY1 547 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Traf3ip1Q149C2 625 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Itga6Q61739 1091 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Smc5Q8CG46 1101 aaKnown RBP13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Lrrfip2Q91WK0 415 aa13.49□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Sptbn5F6UCX4 1208 aa13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 F2rP30558 430 aa13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 DlatQ8BMF4 642 aa13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Mroh2aD3Z750 1679 aa13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Kdm3aQ6PCM1 1323 aa13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Iqgap1Q9JKF1 1657 aaKnown RBP13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Dennd3A2RT67 1274 aa13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Snrpa1P57784 255 aaKnown RBP13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Atp8b2P98199 1209 aa13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Bms1Q6PGF5 1284 aaKnown RBP13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Nphp3Q7TNH6 1325 aa13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Yeats2Q3TUF7 1407 aa13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Depdc5P61460 1591 aa13.48□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Prr29B1ARI9 187 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Ppfibp2O35711 882 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Gpr162Q3UN16 588 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Tom1l2Q5SRX1 507 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Map3k12Q60700 888 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Trim27Q62158 513 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Cnot6lQ8VEG6 555 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Zcrb1Q9CZ96 217 aaKnown RBP13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 2310002L09RikQ9D7L5 217 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Zkscan8Q8BSL0 588 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Xrcc4Q924T3 326 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Trim11Q99PQ2 467 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Ppfia1B2RXQ2 1266 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Fez1Q8K0X8 392 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Cfap74Q3UY96 1578 aa13.47□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Mapkapk5O54992 473 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 NefhP19246 1090 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Cdcp1Q5U462 833 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Sp4Q62445 782 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Tekt3Q6X6Z7 490 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Cdan1Q8CC12 1239 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Fmn2Q9JL04 1578 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Wdr63B2RY71 923 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Ftsj3Q9DBE9 838 aaKnown RBP13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Pim2Q62070 370 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Atp2b4Q6Q477 1205 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Atf7Q8R0S1 413 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Zbtb43Q9DAI4 467 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 WtapQ9ER69 396 aa13.46□□□□□ -0.25
Scaf4-202ENSMUST00000163419 Kank1E9Q238 1360 aa13.46□□□□□ -0.26
Scaf4-202ENSMUST00000163419 AU022751B1B0V2 589 aa13.46□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Metap2O08663 478 aaKnown RBP13.46□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Limch1Q3UH68 1057 aa13.46□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Vps54Q5SPW0 977 aa13.46□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Nap1l5Q9JJF0 156 aa13.46□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Hdac6Q9Z2V5 1149 aa13.46□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Olfr247E9PVJ7 320 aa13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Olfr819K7N727 320 aa13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Ccdc66Q6NS45 935 aa13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Dcaf5Q80T85 946 aa13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Lmbrd2Q8C561 694 aa13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 HmcesQ8R1M0 353 aaKnown RBP13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Ier5O89113 308 aa13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Cacna2d4Q5RJF7 1116 aa13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Dot1lQ6XZL8 1540 aa13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Lrrc9Q8CDN9 1456 aa13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Edc3Q8K2D3 508 aaKnown RBP13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 ScaperF8VQ70 1398 aaKnown RBP13.45□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Nyap1Q6PFX7 833 aa13.44□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Duxf3A0A0N4SV92 674 aa13.44□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Mdm2P23804 489 aa13.44□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Olfml1Q8BSH2 233 aa13.44□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Efcab6Q6P1E8 1516 aa13.44□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Rbm8a2A0A0N4SUH6 174 aa13.44□□□□□ -0.26
Scaf4-202ENSMUST00000163419 PicalmQ7M6Y3 660 aaKnown RBP13.44□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Vps16Q920Q4 839 aa13.44□□□□□ -0.26
Scaf4-202ENSMUST00000163419 Rbm8aQ9CWZ3 174 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms