RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Casz1Q9CWL2 1761 aa31,3■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Prr5lA2AVJ5 370 aa31,3■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Neurod6P48986 337 aa31,3■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Plcb3P51432 1234 aaKnown RBP31,3■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Rhot2Q8JZN7 620 aa31,3■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Ltbp1Q8CG19 1712 aa31,29■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Catsper2A2ARP9 588 aa31,29■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Cyp19a1P28649 503 aa31,29■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Tmc2Q8R4P4 888 aa31,29■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Nol10Q5RJG1 687 aaKnown RBP31,28■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Atg9aQ68FE2 551 aa31,28■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Miga2Q8BK03 593 aa31,28■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Sgsm1Q8BPQ7 1093 aa31,27■■■□□ 2,6
Tpm1-216ENSMUST00000113707 LratQ9JI60 231 aa31,27■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Brpf1B2RRD7 1212 aa31,27■■■□□ 2,6
Tpm1-216ENSMUST00000113707 EspnlQ3UYR4 1005 aa31,27■■■□□ 2,6
Tpm1-216ENSMUST00000113707 Zkscan16A2ALW2 728 aa31,26■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Eya2O08575 532 aa31,26■■■□□ 2,59
Tpm1-216ENSMUST00000113707 DbnlQ62418 436 aa31,26■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Ciao1Q99KN2 339 aa31,26■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Pmfbp1Q9WVQ0 1022 aa31,26■■■□□ 2,59
Tpm1-216ENSMUST00000113707 NfkbibQ60778 359 aa31,25■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Esco1Q69Z69 843 aa31,25■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Nyap1Q6PFX7 833 aa31,25■■■□□ 2,59
Tpm1-216ENSMUST00000113707 GptQ8QZR5 496 aa31,25■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Chmp3Q9CQ10 224 aa31,25■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Ppfia1B2RXQ2 1266 aa31,25■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Anapc15P60007 132 aa31,25■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Zbtb45Q52KG4 520 aa31,25■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Igflr1Q3U4N7 345 aa31,23■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Rrs1Q9CYH6 365 aaKnown RBP31,23■■■□□ 2,59
Tpm1-216ENSMUST00000113707 GakQ99KY4 1305 aa31,23■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Cops6O88545 324 aa31,22■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Htatsf1Q8BGC0 757 aa31,22■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Il1rapl2Q9ERS6 686 aa31,22■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Greb1lB9EJV3 1913 aa31,22■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Fam102bQ8BQS4 339 aa31,21■■■□□ 2,59
Tpm1-216ENSMUST00000113707 Ankrd31A0A140LI88 1765 aa31,2■■■□□ 2,59
Tpm1-216ENSMUST00000113707 4930523C07RikE9Q2T4 99 aa31,2■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Rfx1P48377 963 aa31,2■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Foxo4Q9WVH3 505 aa31,2■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Rad50P70388 1312 aa31,19■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Bicdl1A0JNT9 577 aa31,19■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Gsdma2Q32M21 443 aa31,19■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Slf2Q6P9P0 1278 aa31,19■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Lama4P97927 1816 aa31,19■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Strn4P58404 760 aa31,18■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Ddx11Q6AXC6 880 aa31,18■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Top1mtQ8R4U6 593 aa31,18■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Ms4a2P20490 235 aa31,18■■■□□ 2,58
Tpm1-216ENSMUST00000113707 BcanQ61361 883 aa31,18■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Zbtb38Q3LR78 1197 aa31,17■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Mctp2Q5RJH2 878 aa31,17■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Slfnl1Q8BHW9 410 aa31,17■■■□□ 2,58
Tpm1-216ENSMUST00000113707 LlphQ9D945 130 aaKnown RBP31,17■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Trim34aQ99PP6 485 aa31,16■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Myh1Q5SX40 1942 aa31,16■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Jakmip1Q8BVL9 626 aa31,16■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Taok3Q8BYC6 898 aa31,16■■■□□ 2,58
Tpm1-216ENSMUST00000113707 AnlnQ8K298 1121 aaKnown RBP31,16■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Nsfl1cQ9CZ44 370 aaKnown RBP31,16■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Cyp27a1Q9DBG1 533 aa31,16■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Kdm3aQ6PCM1 1323 aa31,15■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Afg3l2Q8JZQ2 802 aaKnown RBP31,15■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Trim34bJ3QNR8 485 aa31,14■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Smarcc1P97496 1104 aa31,14■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Tshz3Q8CGV9 1081 aa31,14■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Kiaa0319lQ8K135 1048 aa31,14■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Mlh1Q9JK91 760 aa31,14■■■□□ 2,58
Tpm1-216ENSMUST00000113707 Col22a1E9Q7P1 1613 aa31,13■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Rbbp8nlA2ABX0 614 aa31,13■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Ifit1bl2Q3U687 466 aa31,12■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Timm10P62073 90 aa31,12■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Stk11ipQ3TAA7 1072 aa31,12■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Cyp7a1Q64505 503 aa31,12■■■□□ 2,57
Tpm1-216ENSMUST00000113707 SowahdQ8BY98 327 aa31,12■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Tmem266Q8BZB3 538 aa31,12■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Zcrb1Q9CZ96 217 aaKnown RBP31,12■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Ppfibp2O35711 882 aa31,11■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Ftl2P49945 183 aa31,11■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Atp8a2P98200 1148 aa31,11■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Ncoa5Q91W39 579 aaKnown RBP31,11■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Mybbp1aQ7TPV4 1344 aaKnown RBP31,1■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Rsph3aQ3UFY4 516 aa31,1■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Asap2Q7SIG6 958 aa31,1■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Susd4Q8BH32 490 aa31,1■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Nphp3Q7TNH6 1325 aa31,09■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Casq1O09165 405 aa31,08■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Vps54Q5SPW0 977 aa31,08■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Rtn4Q99P72 1162 aaKnown RBP31,08■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Trip6Q9Z1Y4 480 aa31,08■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Lrrc43Q3V0L5 667 aa31,08■■■□□ 2,57
Tpm1-216ENSMUST00000113707 Ifit2Q64112 472 aa31,07■■■□□ 2,56
Tpm1-216ENSMUST00000113707 NgdnQ9DB96 315 aaKnown RBP31,07■■■□□ 2,56
Tpm1-216ENSMUST00000113707 Gpr182P43142 395 aa31,06■■■□□ 2,56
Tpm1-216ENSMUST00000113707 Snai1Q02085 264 aa31,06■■■□□ 2,56
Tpm1-216ENSMUST00000113707 Lrit1Q8K099 624 aa31,06■■■□□ 2,56
Tpm1-216ENSMUST00000113707 Krt25Q8VCW2 446 aa31,06■■■□□ 2,56
Tpm1-216ENSMUST00000113707 Dpf1Q9QX66 387 aa31,06■■■□□ 2,56
Tpm1-216ENSMUST00000113707 Itga6Q61739 1091 aa31,06■■■□□ 2,56
Retrieved 100 of 22,080 RNA–protein pairs in 11,2 ms