RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Ms4a1P19437 291 aa11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ssr1Q9CY50 286 aaKnown RBP11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Rassf4Q8CB96 322 aa11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Arhgef6Q8K4I3 771 aa11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Cacna2d4Q5RJF7 1116 aa11.98□□□□□ -0.49
Scn8a-201ENSMUST00000082209 GnaqP21279 359 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 EvcP57680 1005 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Golim4Q8BXA1 655 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Plekho1Q9JIY0 408 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 AdnpQ9Z103 1108 aaKnown RBP11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Samd1D3YXK1 519 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Smarcc1P97496 1104 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 E9QMW4 1145 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Senp1P59110 640 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Morc2aQ69ZX6 1030 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ccdc122Q8BVN0 290 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ccdc170D3YXL0 722 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Stat1P42225 749 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Dnajc2P54103 621 aaKnown RBP11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Kmt5bQ3U8K7 883 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Cwc25Q9DBF7 416 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Edc4Q3UJB9 1406 aaKnown RBP11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ces1aE9PYP1 563 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ccdc66Q6NS45 935 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Bcl11bQ99PV8 884 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Efhd1Q9D4J1 240 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 ApobrQ8VBT6 942 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Itsn2Q9Z0R6 1659 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 PalldQ9ET54 1408 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Metap2O08663 478 aaKnown RBP11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Sdc2P43407 202 aa11.97□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Cep120Q7TSG1 988 aa11.96□□□□□ -0.49
Scn8a-201ENSMUST00000082209 TrdnE9Q9K5 693 aa11.96□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Ube3aO08759 870 aa11.96□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Myo1bP46735 1107 aa11.96□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Secisbp2lQ6A098 1086 aaKnown RBP11.96□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Skor1Q8BX46 964 aa11.96□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Calm1P0DP26 149 aaKnown RBP11.96□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Calm2P0DP27 149 aaKnown RBP11.96□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Calm3P0DP28 149 aaKnown RBP11.96□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Tbc1d8bA3KGB4 1114 aa11.96□□□□□ -0.49
Scn8a-201ENSMUST00000082209 Zfp42P22227 288 aa11.96□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Sh3d21Q7TSG5 549 aa11.96□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Evi5lH3BKQ3 813 aa11.96□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Eif3j1Q3UGC7 261 aaKnown RBP11.96□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Eif3j2Q66JS6 263 aa11.96□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Chrna2Q91X60 512 aa11.96□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ccdc162pQ0VG85 912 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Atp7aQ64430 1491 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 KdrP35918 1367 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Fhod3Q76LL6 1578 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Opa1P58281 960 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 ClasrpQ8CFC7 668 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Abcc6Q9R1S7 1498 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Tmx4Q8C0L0 335 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 DmtnQ9WV69 405 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Gm28919A0A087WP35 240 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ell2Q3UKU1 639 aa11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Clasp1Q80TV8 1535 aaKnown RBP11.95□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Paip2Q9D6V8 124 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Uso1Q9Z1Z0 959 aaKnown RBP11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 4921504E06RikQ8CET2 560 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Haus2Q9CQS9 234 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Rdm1Q9CQK3 281 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Sycp2lA0A0M3U1B0 842 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Bicdl1A0JNT9 577 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Speer4aF8VPX6 267 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ppp1r10Q80W00 888 aaKnown RBP11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Top1Q04750 767 aaKnown RBP11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Polr3dQ91WD1 398 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Usp5P56399 858 aaKnown RBP11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Q3UPC7 1272 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Rrs1Q9CYH6 365 aaKnown RBP11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Gm21985Q6P6P5 1106 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Hook2Q7TMK6 716 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Hsf2bpQ9D4G2 338 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Samd9lQ69Z37 1561 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Iffo1Q8BXL9 562 aa11.94□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Uspl1Q3ULM6 1089 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Usp25P57080 1055 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Stk11ipQ3TAA7 1072 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Krt25Q8VCW2 446 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Dclk3Q8BWQ5 790 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Zbtb43Q9DAI4 467 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ift88Q61371 824 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Cpa2Q504N0 417 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Rasa1E9PYG6 1038 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Calcoco1Q8CGU1 691 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Sytl4Q9R0Q1 673 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Fam160b2Q80YR2 744 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ncapd2Q8K2Z4 1392 aa11.93□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Aox1O54754 1333 aa11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Homer1Q9Z2Y3 366 aa11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Tspyl2Q7TQI8 677 aa11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Sdccag8Q80UF4 717 aa11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Calml3Q9D6P8 149 aa11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Mmel1Q9JLI3 765 aa11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Ctnna2Q61301 953 aa11.92□□□□□ -0.5
Scn8a-201ENSMUST00000082209 Cfap73J3QPZ5 306 aa11.92□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 103.2 ms