RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 Ifit2Q64112 472 aa11.47□□□□□ -0.57
Cpsf3-201ENSMUST00000067284 Nlrp9bQ66X22 1003 aa11.47□□□□□ -0.57
Cpsf3-201ENSMUST00000067284 MypnQ5DTJ9 1315 aa11.47□□□□□ -0.57
Cpsf3-201ENSMUST00000067284 Ppfia1B2RXQ2 1266 aa11.46□□□□□ -0.57
Cpsf3-201ENSMUST00000067284 Naa30Q8CES0 364 aa11.46□□□□□ -0.57
Cpsf3-201ENSMUST00000067284 Tceanc2Q8R2M0 207 aa11.46□□□□□ -0.57
Cpsf3-201ENSMUST00000067284 4931400O07RikQ9D4M5 137 aa11.46□□□□□ -0.57
Cpsf3-201ENSMUST00000067284 LratQ9JI60 231 aa11.46□□□□□ -0.57
Cpsf3-201ENSMUST00000067284 Sytl4Q9R0Q1 673 aa11.46□□□□□ -0.57
Cpsf3-201ENSMUST00000067284 Ubr2Q6WKZ8 1755 aa11.46□□□□□ -0.57
Cpsf3-201ENSMUST00000067284 Rbm27Q5SFM8 1060 aaKnown RBP11.46□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 DpydQ8CHR6 1025 aa11.46□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Txnrd1Q9JMH6 613 aa11.46□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 FocadA2AKG8 1798 aa11.46□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Pkp1P97350 728 aaKnown RBP11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 St18Q80TY4 1045 aa11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Pip4k2bQ80XI4 416 aa11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Tti2Q8BGV4 512 aa11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 KinQ8K339 391 aa11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Mrpl50Q8VDT9 159 aaKnown RBP11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Zhx1P70121 873 aa11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 GpkowQ56A08 488 aa11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Bms1Q6PGF5 1284 aaKnown RBP11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 TefQ9JLC6 301 aa11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Eif3aP23116 1344 aaKnown RBP11.45□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ugt1a5B2RT14 529 aa11.44□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 EappQ5BU09 281 aa11.44□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ints3Q7TPD0 1041 aaKnown RBP11.44□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ripor2Q80U16 1078 aa11.44□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Irx4Q9QY61 515 aa11.44□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Mdm2P23804 489 aa11.44□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Babam1Q3UI43 333 aa11.44□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 E4f1Q8CCE9 783 aa11.44□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Sf3a1Q8K4Z5 791 aaKnown RBP11.44□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Speer4bQ9D9F7 267 aa11.44□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Rbm8a2A0A0N4SUH6 174 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Neurod6P48986 337 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Strn4P58404 760 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Tshz1Q5DTH5 1084 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Rnf214Q8BFU3 668 aaKnown RBP11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Efcab2Q9CQ46 164 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Rbm8aQ9CWZ3 174 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Bag3Q9JLV1 577 aaKnown RBP11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Abca15E9PWH4 1668 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 AceP09470 1312 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Gm21663A0A0G2JE01 267 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Kcnb2A6H8H5 907 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Gm7361D3Z6R1 267 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 5031410I06RikE9Q4E0 267 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Gm1979E9QAN3 267 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Gm5862K7N5V5 267 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Gm10220K7N660 267 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 PtmaP26350 111 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Syt1P46096 421 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Atp6v1dP57746 247 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 DbnlQ62418 436 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Adam1bQ8R534 806 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Fam84aQ9D650 292 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ak2Q9WTP6 239 aa11.43□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 1700017N19RikA0A087WPJ1 469 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Cbx1P83917 185 aaKnown RBP11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Soga3Q6NZL0 945 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Sp8Q8BMJ8 486 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Dis3l2Q8CI75 870 aaKnown RBP11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Rapgef3Q8VCC8 918 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Nol7Q9D7Z3 254 aaKnown RBP11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Scn4aQ9ER60 1841 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 InsrrQ9WTL4 1300 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Smarce1O54941 411 aaKnown RBP11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ddx19aQ61655 478 aaKnown RBP11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Anp32cQ64G17 123 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Tsr2Q8C8T8 191 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ints5Q8CHT3 1018 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Inpp5bQ8K337 993 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Acsbg1Q99PU5 721 aa11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 PtmsQ9D0J8 101 aaKnown RBP11.42□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ank1Q02357 1862 aa11.41□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ccdc173A0JLY1 547 aa11.41□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Sgsm2Q80U12 1005 aa11.41□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ubxn10Q8BG34 277 aa11.41□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Kdm4aQ8BW72 1064 aa11.41□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Slc5a1Q8C3K6 665 aa11.41□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Vps54Q5SPW0 977 aa11.41□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Polr3dQ91WD1 398 aa11.41□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ccdc96Q9CR92 584 aa11.41□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Slit1Q80TR4 1531 aa11.4□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 4930572O03RikQ8C5Y0 211 aa11.4□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Plcd3Q8K2J0 785 aa11.4□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Ccar2Q8VDP4 922 aaKnown RBP11.4□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Pus3Q9JI38 481 aa11.4□□□□□ -0.58
Cpsf3-201ENSMUST00000067284 Atp2b3Q0VF55 1220 aa11.4□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Usp48Q3V0C5 1052 aa11.4□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ddx11Q6AXC6 880 aa11.4□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Dmrt2Q8BG36 561 aa11.4□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Ssfa2Q922B9 1252 aa11.4□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Q9D9S1 216 aa11.4□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Stx6Q9JKK1 255 aa11.4□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Syde2E9PUP1 1314 aa11.39□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 Hoxa7P02830 229 aa11.39□□□□□ -0.59
Cpsf3-201ENSMUST00000067284 AppP12023 770 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms