RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Ripply1Q2WG77 201 aa16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Epb41l2O70318 988 aaKnown RBP16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Kif5bQ61768 963 aa16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Sclt1G5E861 688 aa16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Ccdc57Q6PHN1 1016 aa16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 GphnQ8BUV3 769 aaKnown RBP16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Efhd1Q9D4J1 240 aa16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Fam135aQ6NS59 1506 aa16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Rimbp2Q80U40 1072 aa16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Pym1Q8CHP5 203 aaKnown RBP16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 ApobrQ8VBT6 942 aa16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 TimelessQ9R1X4 1197 aa16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Cib2Q9Z309 187 aa16.41■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Stx6Q9JKK1 255 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Izumo3A6PWV3 263 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 P4ha1Q60715 534 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Gpr161B2RPY5 545 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Psmc4P54775 418 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 HellsQ60848 821 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 DonsonQ9QXP4 560 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Myo1bP46735 1107 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Adcy5P84309 1262 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Ssrp1Q08943 708 aaKnown RBP16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 GnaqP21279 359 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Kmt5bQ3U8K7 883 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Sec63Q8VHE0 760 aaKnown RBP16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 DroshaQ5HZJ0 1373 aaKnown RBP16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Gm1043A0A140LJC2 1431 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Ccdc121E9Q6D3 323 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Zrsr1Q64707 428 aa16.4■□□□□ 0.22
Col7a1-201ENSMUST00000026740 Gm7298A0A0N4SVU1 1476 aa16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Arl1P61211 181 aa16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Gtpbp10Q8K013 366 aa16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Gucy1a3Q9ERL9 691 aa16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Cbx1P83917 185 aaKnown RBP16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 PrphP15331 475 aa16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Cage1Q5IR70 849 aa16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Smarcc2Q6PDG5 1213 aa16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Il16O54824 1322 aa16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Stmn2P55821 179 aa16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Kif1bQ60575 1816 aaKnown RBP16.39■□□□□ 0.21
Col7a1-201ENSMUST00000026740 NmiO35309 314 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Apaf1O88879 1249 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Atp2a1Q8R429 994 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Zmym4A2A791 1549 aaKnown RBP16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Gng11P61953 73 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Stk11ipQ3TAA7 1072 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Mcur1Q9CXD6 340 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Senp1P59110 640 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Tubb2aQ7TMM9 445 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Tubb2bQ9CWF2 445 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Fam186bD3Z420 943 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Homer2Q9QWW1 354 aa16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Sec62Q8BU14 398 aaKnown RBP16.38■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Map3k13Q1HKZ5 959 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Cep128Q8BI22 1102 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Bag3Q9JLV1 577 aaKnown RBP16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Rfwd2Q9R1A8 733 aaKnown RBP16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Ccdc38Q8CDN8 563 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Srgap1Q91Z69 1062 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Fam76aQ922G2 307 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Metap2O08663 478 aaKnown RBP16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 SbdsP70122 250 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Prpf31Q8CCF0 499 aaKnown RBP16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Rrs1Q9CYH6 365 aaKnown RBP16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Tbc1d8bA3KGB4 1114 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Evi5lH3BKQ3 813 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Exoc1Q8R3S6 894 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Ankrd49Q8VE42 238 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Ppp1r15aP17564 657 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 CebpzP53569 1052 aaKnown RBP16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Atad3Q925I1 591 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 4930548H24RikQ9D496 437 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Ncapd3Q6ZQK0 1506 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 GpkowQ56A08 488 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 JmyQ9QXM1 983 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Kif21bQ9QXL1 1668 aa16.37■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Letm1Q9Z2I0 738 aa16.36■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Actn2Q9JI91 894 aa16.36■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Ankrd35E9Q9D8 996 aa16.36■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Ift88Q61371 824 aa16.36■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Haus1Q8BHX1 278 aa16.36■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Ppfia2Q8BSS9 1257 aa16.36■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Palm3A2TJV2 734 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Usp25P57080 1055 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Ccdc114Q3UX62 658 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 4931400O07RikQ9D4M5 137 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Klc3Q91W40 508 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Eif4g1Q6NZJ6 1600 aaKnown RBP16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Mroh7A2AVR2 1279 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Gm10378F6XQQ1 160 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Atp6v0a2P15920 856 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Ppfibp1Q8C8U0 969 aaKnown RBP16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Duox2A2AQ99 1517 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Heatr4E9Q357 955 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Serpinc1P32261 465 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Cep63Q3UPP8 700 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 TmpoQ61033 693 aaKnown RBP16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Tacc2Q9JJG0 1149 aa16.35■□□□□ 0.21
Col7a1-201ENSMUST00000026740 Kif11Q6P9P6 1052 aa16.35■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms