RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Ppp4r3bQ922R5 820 aa10.73□□□□□ -0.69
Ctc1-201ENSMUST00000021278 KynuQ9CXF0 464 aa10.73□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Dnajc21E9Q8D0 531 aa10.73□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Kifc2O08672 792 aa10.73□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Anapc15P60007 132 aa10.73□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Ppp1r7Q3UM45 361 aa10.73□□□□□ -0.69
Ctc1-201ENSMUST00000021278 SncbQ91ZZ3 133 aa10.73□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Ccdc114Q3UX62 658 aa10.73□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Luzp1Q8R4U7 1068 aaKnown RBP10.73□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Prex1Q69ZK0 1650 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Zfpm1O35615 995 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Kirrel3Q8BR86 778 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Gm18336A0A140LIU8 765 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 EsrrbQ61539 433 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Jakmip1Q8BVL9 626 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Gigyf1Q99MR1 1044 aaKnown RBP10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 CenphQ9QYM8 241 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Pde11aP0C1Q2 933 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Ube2hP62257 183 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Fam184bQ0KK56 942 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Nlrp3Q8R4B8 1033 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Apbb1ipQ8R5A3 670 aa10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Prrc2bQ7TPM1 1486 aaKnown RBP10.72□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Tax1bp1Q3UKC1 814 aaKnown RBP10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Brinp3Q499E0 766 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Nlrp4fQ66X05 959 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 LarsQ8BMJ2 1178 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 RalylQ8BTF8 293 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Rassf8Q8CJ96 419 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 ErmapQ9JLN5 566 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 ShprhQ7TPQ3 1674 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Wdr33Q8K4P0 1330 aaKnown RBP10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Ddit3P35639 168 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Gnl3lQ6PGG6 577 aaKnown RBP10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 LnpkQ7TQ95 425 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Srgap3Q812A2 1099 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Amigo3Q8C2S7 508 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 GzmnQ920S1 248 aa10.71□□□□□ -0.69
Ctc1-201ENSMUST00000021278 Naip7Q9JIB3 1402 aa10.71□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Rb1P13405 921 aa10.71□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Gbp4Q61107 620 aa10.71□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Cc2d1bQ8BRN9 848 aa10.71□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Pof1bQ8K4L4 587 aa10.71□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Eif3cQ8R1B4 911 aaKnown RBP10.71□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ccdc12Q8R344 166 aaKnown RBP10.71□□□□□ -0.7
Ctc1-201ENSMUST00000021278 IghaA0A0A6YXW6 389 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Dctn1O08788 1281 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ccdc33Q3ULW6 985 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Elf1Q60775 612 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Prc1Q99K43 603 aaKnown RBP10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Znf568E9PYI1 671 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Trove2O08848 538 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Pde6bP23440 856 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 TfrcQ62351 763 aaKnown RBP10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Smc4Q8CG47 1286 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ctnnbl1Q9CWL8 563 aaKnown RBP10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Gli3Q61602 1583 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Rfc1P35601 1131 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Zfp51Q3U4L8 781 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Nat10Q8K224 1024 aaKnown RBP10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Atxn3Q9CVD2 355 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ifi35Q9D8C4 286 aa10.7□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Tyro3P55144 880 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Cep89Q9CZX2 791 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Myo1bP46735 1107 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Zkscan4Q5SZT6 480 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Wdr60Q8C761 999 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Brms1Q99N20 246 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 HypkQ9CR41 129 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Gbp9Q8BTS3 619 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ndufab1Q9CR21 156 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 GnpatP98192 678 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Wwc1Q5SXA9 1104 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 CtifQ6PEE2 600 aaKnown RBP10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ppp2r1aQ76MZ3 589 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Cplx4Q80WM3 160 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Tnip1Q9WUU8 647 aa10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Gemin5Q8BX17 1502 aaKnown RBP10.69□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Fam43bA2AM80 330 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Exoc6bA6H5Z3 810 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ifit1bl1D3Z6F0 470 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Tab3Q571K4 716 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Erc2Q6PH08 957 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Map3k11Q80XI6 850 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Phc3Q8CHP6 981 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 AnlnQ8K298 1121 aaKnown RBP10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Lztfl1Q9JHQ5 299 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Hmox1P14901 289 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Npdc1Q64322 332 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Znf513Q6PD29 541 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Klc4Q9DBS5 619 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Plagl1Q9JLQ4 704 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Plcb3P51432 1234 aaKnown RBP10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Hs1bp3Q3TC93 395 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Gpatch3Q8BIY1 525 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Acbd3Q8BMP6 525 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ebag9Q9D0V7 213 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Rsrc1Q9DBU6 334 aa10.68□□□□□ -0.7
Ctc1-201ENSMUST00000021278 EvcP57680 1005 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Atg3Q9CPX6 314 aa10.67□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms