RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 OR4C3Q8NH37 302 aa18.84■□□□□ 0.61
CHKB-201ENST00000406938 CDCP1Q9H5V8 836 aa18.84■□□□□ 0.61
CHKB-201ENST00000406938 CCDC86Q9H6F5 360 aaKnown RBP18.84■□□□□ 0.61
CHKB-201ENST00000406938 BAG5Q9UL15 447 aa18.84■□□□□ 0.61
CHKB-201ENST00000406938 OR6C70A6NIJ9 312 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 ARGFXA6NJG6 315 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 CLDN24A6NM45 220 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 H0Y3Z8 333 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 ABCB7O75027 752 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 ICOSLGO75144 302 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 MT-ND1P03886 318 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 SEMG1P04279 462 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 FESP07332 822 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 THBS1P07996 1170 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 NID1P14543 1247 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 TNFRSF1BP20333 461 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 ITGA3P26006 1051 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 LCN1P31025 176 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 HOXD11P31277 338 aaPredicted RBP18.83■□□□□ 0.61
CHKB-201ENST00000406938 PRKAR1BP31321 381 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 TMED10P49755 219 aaKnown RBP18.83■□□□□ 0.61
CHKB-201ENST00000406938 PNLIPRP2P54317 469 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 FBXW4P57775 412 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 MLF1P58340 268 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 CHRNB3Q05901 458 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 LARS2Q15031 903 aaKnown RBP18.83■□□□□ 0.61
CHKB-201ENST00000406938 ZNF141Q15928 474 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 GRAMD1BQ3KR37 738 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 TBCELQ5QJ74 424 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 JMJD6Q6NYC1 403 aaPredicted RBP18.83■□□□□ 0.61
CHKB-201ENST00000406938 AAGABQ6PD74 315 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 DHRS4L2Q6PKH6 230 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 ZNF836Q6ZNA1 936 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 SLC15A4Q8N697 577 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 TMEM102Q8N9M5 508 aaPredicted RBP18.83■□□□□ 0.61
CHKB-201ENST00000406938 PROX1Q92786 737 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 GATA6Q92908 595 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 PINK1Q9BXM7 581 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 MAGIXQ9H6Y5 334 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 ZBTB20Q9HC78 741 aaPredicted RBP18.83■□□□□ 0.61
CHKB-201ENST00000406938 YARS2Q9Y2Z4 477 aaKnown RBP18.83■□□□□ 0.61
CHKB-201ENST00000406938 AP4S1Q9Y587 144 aa18.83■□□□□ 0.61
CHKB-201ENST00000406938 EFSO43281 561 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 HS6ST1O60243 411 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 EPPINO95925 133 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 FBXO45P0C2W1 286 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 RAP2AP10114 183 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 NAGAP17050 411 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 SOX3P41225 446 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 RRADP55042 308 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 RCN1Q15293 331 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 IFI44LQ53G44 452 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 B3GNTL1Q67FW5 361 aaPredicted RBP18.82■□□□□ 0.6
CHKB-201ENST00000406938 OR5M3Q8NGP4 307 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 GEMIN6Q8WXD5 167 aaKnown RBP18.82■□□□□ 0.6
CHKB-201ENST00000406938 PSMF1Q92530 271 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 ZNF354BQ96LW1 612 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 HOXD1Q9GZZ0 328 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 UBQLN4Q9NRR5 601 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 ARMC1Q9NVT9 282 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 ZNF232Q9UNY5 417 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 SH3GLB1Q9Y371 365 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 CHST2Q9Y4C5 530 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 OXSR1O95747 527 aaPredicted RBP18.82■□□□□ 0.6
CHKB-201ENST00000406938 OR1E2P47887 323 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 SSR4P51571 173 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 EEF1A1P68104 462 aaKnown RBP18.82■□□□□ 0.6
CHKB-201ENST00000406938 RIPK1Q13546 671 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 ZNF527Q8NB42 609 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 PAPD5Q8NDF8 572 aaKnown RBP18.82■□□□□ 0.6
CHKB-201ENST00000406938 APOBEC4Q8WW27 367 aaKnown RBP18.82■□□□□ 0.6
CHKB-201ENST00000406938 SPACA9Q96E40 222 aaPredicted RBP18.82■□□□□ 0.6
CHKB-201ENST00000406938 CHID1Q9BWS9 393 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 LHPPQ9H008 270 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 RLIMQ9NVW2 624 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 POLHQ9Y253 713 aa18.82■□□□□ 0.6
CHKB-201ENST00000406938 OR6B1O95007 311 aa18.81■□□□□ 0.6
CHKB-201ENST00000406938 HPGDP15428 266 aa18.81■□□□□ 0.6
CHKB-201ENST00000406938 TBXA2RP21731 343 aa18.81■□□□□ 0.6
CHKB-201ENST00000406938 ST13P50502 369 aaKnown RBP18.81■□□□□ 0.6
CHKB-201ENST00000406938 EFR3AQ14156 821 aa18.81■□□□□ 0.6
CHKB-201ENST00000406938 EIPR1Q53HC9 387 aa18.81■□□□□ 0.6
CHKB-201ENST00000406938 ACER2Q5QJU3 275 aa18.81■□□□□ 0.6
CHKB-201ENST00000406938 MRPL2Q5T653 305 aaKnown RBP18.81■□□□□ 0.6
CHKB-201ENST00000406938 RNF220Q5VTB9 566 aa18.81■□□□□ 0.6
CHKB-201ENST00000406938 CLIP4Q8N3C7 705 aa18.81■□□□□ 0.6
CHKB-201ENST00000406938 HGDQ93099 445 aa18.81■□□□□ 0.6
CHKB-201ENST00000406938 DTNAQ9Y4J8 743 aa18.81■□□□□ 0.6
CHKB-201ENST00000406938 FRYQ5TBA9 3013 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 PRAMEF25A6NGN4 478 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 SYT5O00445 386 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 SCDO00767 359 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 TIPRLO75663 272 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 ATP6V1G2O95670 118 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 LGI1O95970 557 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 MAGEA2P43356 314 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 VLDLRP98155 873 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 PLAURQ03405 335 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 FGFBP1Q14512 234 aa18.8■□□□□ 0.6
CHKB-201ENST00000406938 KLHL26Q53HC5 615 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms