RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 NDUFAF5Q5TEU4 345 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 LIPJQ5W064 366 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SFRP4Q6FHJ7 346 aaPredicted RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TCTN3Q6NUS6 607 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 PODNL1Q6PEZ8 512 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 LRFN4Q6PJG9 635 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 FAM198BQ6UWH4 519 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 KLHL36Q8N4N3 616 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ANKRD53Q8N9V6 530 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 OR4K5Q8NGD3 323 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 OR5M3Q8NGP4 307 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SPPL3Q8TCT6 385 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CLP1Q92989 425 aaKnown RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 NARS2Q96I59 477 aaKnown RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SLC38A2Q96QD8 506 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ARHGAP9Q9BRR9 750 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TMEM38AQ9H6F2 299 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 HPF1Q9NWY4 346 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ZSCAN32Q9NX65 697 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 NLGN3Q9NZ94 848 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SPG21Q9NZD8 308 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CPNE7Q9UBL6 633 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CD84Q9UIB8 345 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 GMEB2Q9UKD1 530 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 FBXW2Q9UKT8 454 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 COPS3Q9UNS2 423 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 KCNMB2Q9Y691 235 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 PATJQ8NI35 1801 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 MEIKINA0A087WXM9 373 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SLC22A23A1A5C7 686 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 HIDE1A8MVS5 230 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 KRBOX1C9JBD0 128 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 ZNF197O14709 1029 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 PRODHO43272 600 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SLC28A2O43868 658 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 TFP02787 698 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 URODP06132 367 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 LIMS3P0CW19 117 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 LIMS4P0CW20 117 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 PEPDP12955 493 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 LAG3P18627 525 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 PSMA3P25788 255 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 ATP5C1P36542 298 aaKnown RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 MMP12P39900 470 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SLC1A3P43003 542 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 CBX5P45973 191 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SLC6A12P48065 614 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 B2MP61769 119 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 LSM11P83369 360 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 ELOAQ14241 798 aaKnown RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 LRRC73Q5JTD7 316 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 CD300LGQ6UXG3 332 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 RRM2BQ7LG56 351 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 NLRC3Q7RTR2 1065 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 ZNF687Q8N1G0 1237 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 TRMT10AQ8TBZ6 339 aaKnown RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 ACOT12Q8WYK0 555 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 FOXJ1Q92949 421 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 CHFRQ96EP1 664 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 TMEM19Q96HH6 336 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 ABHD1Q96SE0 405 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 OR51B5Q9H339 312 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SCPEP1Q9HB40 452 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 GKN1Q9NS71 199 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SPATA6Q9NWH7 488 aaPredicted RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 H2AFY2Q9P0M6 372 aaPredicted RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 TESQ9UGI8 421 aaKnown RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 KIF25Q9UIL4 384 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 FBXL2Q9UKC9 423 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 ZNF175Q9Y473 711 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 GVINP1Q7Z2Y8 2422 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 MYO10Q9HD67 2058 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 TRANK1O15050 2925 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 FRMPD3Q5JV73 1810 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 ARPC4-TTLL3A0A0A6YYG9 625 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 MTMR11A4FU01 709 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 MFSD2BA6NFX1 497 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SIGLEC5O15389 551 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 HOXA2O43364 376 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 KLK1P06870 262 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 ZNF8P17098 575 aaPredicted RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 GJA1P17302 382 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 POU3F2P20265 443 aaPredicted RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 RAB3AP20336 220 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 MMP11P24347 488 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SHC1P29353 583 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 RBMS1P29558 406 aaKnown RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 CORO1AP31146 461 aaKnown RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 BTCP35070 178 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 CSNK1DP48730 415 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 ARHGDIBP52566 201 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 OR10A3P58181 314 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SMIM11AP58511 58 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 DGCR2P98153 550 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 PTSQ03393 145 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SIGLEC14Q08ET2 396 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 HSPB3Q12988 150 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 DUSP4Q13115 394 aa4.76□□□□□ -1.65
HMG20A-204ENST00000558288 SNTB2Q13425 540 aaKnown RBP4.76□□□□□ -1.65
HMG20A-204ENST00000558288 GSG1Q2KHT4 349 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms