RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Olig3Q6PFG8 273 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Ppp2r2bQ6ZWR4 443 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Trim46Q7TNM2 759 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Olfr1065Q7TR70 313 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 TxlngQ8BHN1 524 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Gpr152Q8BXS7 511 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Fgd2Q8BY35 655 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Rnf8Q8VC56 488 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Acsl6Q91WC3 697 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Pcdhb16Q91Y03 802 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Tnfaip8Q921Z5 198 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Tmem159Q922Z1 161 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Ncbp2Q9CQ49 156 aaKnown RBP21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Tuba8Q9JJZ2 449 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Skp1Q9WTX5 163 aa21.27■■□□□ 1
Scn1b-201ENSMUST00000098548 Olfr1095A3KPP7 308 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Slc22a28B2RT89 552 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Gm17175E9Q528 179 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Il2raP01590 268 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Nup43P59235 380 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Gbx1P82976 418 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Ttyh2Q3TH73 532 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Lrrc28Q3TX51 367 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Clpsl2Q3UW21 102 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Rab26Q504M8 260 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Slc17a4Q5NCM1 492 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Mrm3Q5ND52 418 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Sox17Q61473 419 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Doxl2Q6IMK7 723 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Olfr527Q7TRT9 305 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Nprl3Q8VIJ8 569 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Cbr4Q91VT4 236 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Cd209aQ91ZX1 238 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Slc22a30Q96LX3 552 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 EqtnQ9D9V2 337 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Wdr53Q9DB94 358 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Aldh6a1Q9EQ20 535 aaKnown RBP21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Mrpl46Q9EQI8 283 aa21.27■□□□□ 0.99
Scn1b-201ENSMUST00000098548 EXOC1LB9EK06 172 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Gm340F6RGI3 1242 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Zfp105G3X9I0 524 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Cxcl10P17515 98 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 PlaaP27612 794 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Hoxc11P31313 304 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Cd59bP58019 129 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tuba4aP68368 448 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Fbxo7Q3U7U3 523 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Bhlha9Q5RJB0 231 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Olfr1318Q7TQW6 320 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Mrps7Q80X85 242 aaKnown RBP21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 9130023H24RikQ8BG98 337 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Atg4bQ8BGE6 393 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Pex26Q8BGI5 305 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tyw3Q8BSA9 257 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tmsb15lQ8C0W0 80 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Olfr1317Q8VF84 316 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Scpep1Q920A5 452 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Msantd3Q9CR78 275 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Glipr1Q9CWG1 255 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Akr1e2Q9DCT1 301 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Adam26aQ9R158 697 aa21.26■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Gm37596A0A0A6YXL2 336 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 S100zB9EJL3 99 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 B3galt2O54905 422 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Stk16O88697 305 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Ppm1bP36993 390 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Sox2P48432 319 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Pcbp3P57722 371 aaKnown RBP21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Adam9Q61072 845 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Wdr48Q8BH57 676 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Hmbox1Q8BJA3 419 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Zcchc3Q8BPK2 400 aaKnown RBP21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Vmn1r215Q8R264 300 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Utp4Q8R2N2 686 aaKnown RBP21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Olfr582Q8VGV9 319 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tmem63aQ91YT8 804 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tmem8aQ9ESN3 769 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Mid2Q9QUS6 705 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Sema4gQ9WUH7 837 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Cldn6Q9Z262 219 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Upk1bQ9Z2C6 260 aa21.25■□□□□ 0.99
Scn1b-201ENSMUST00000098548 PtprsB0V2N1 1907 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 VcanQ62059 3357 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Gm595A2AF73 655 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Vsig10lD3YZF7 868 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 5830473C10RikF8VQ07 620 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Vmn2r9K7N6Z8 848 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 CalrP14211 416 aaKnown RBP21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Idh2P54071 452 aaKnown RBP21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tm9sf2P58021 662 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tgif1P70284 272 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Ica1P97411 478 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 C1qaP98086 245 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Q32P12 615 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Mmp25Q3U435 615 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Zmat1Q3V0C1 714 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Kcnh1Q60603 989 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Nr1h2Q60644 446 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Tnfrsf8Q60846 498 aa21.24■□□□□ 0.99
Scn1b-201ENSMUST00000098548 Methig1Q76I26 264 aa21.24■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms