Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Gm25239-201ENSMUST00000174915 86 ntBASIC36,95■■■■□ 3,51
Hmbox1Q8BJA3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34,51■■■■□ 3,12
Hmbox1Q8BJA3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3,03
Hmbox1Q8BJA3 Gm24109-201ENSMUST00000175489 103 ntBASIC32,44■■■□□ 2,78
Hmbox1Q8BJA3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,43■■■□□ 2,78
Hmbox1Q8BJA3 Gm15042-201ENSMUST00000120212 883 ntBASIC31,6■■■□□ 2,65
Hmbox1Q8BJA3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31,42■■■□□ 2,62
Hmbox1Q8BJA3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Hmbox1Q8BJA3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,27■■■□□ 2,6
Hmbox1Q8BJA3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31,24■■■□□ 2,59
Hmbox1Q8BJA3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31,02■■■□□ 2,56
Hmbox1Q8BJA3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30,88■■■□□ 2,53
Hmbox1Q8BJA3 Gm23366-201ENSMUST00000175022 89 ntBASIC30,79■■■□□ 2,52
Hmbox1Q8BJA3 Gm15045-201ENSMUST00000117359 883 ntBASIC30,72■■■□□ 2,51
Hmbox1Q8BJA3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30,48■■■□□ 2,47
Hmbox1Q8BJA3 Psd-208ENSMUST00000224556 2034 ntBASIC30,37■■■□□ 2,45
Hmbox1Q8BJA3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30,25■■■□□ 2,43
Hmbox1Q8BJA3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
Hmbox1Q8BJA3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30,18■■■□□ 2,42
Hmbox1Q8BJA3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30,05■■■□□ 2,4
Hmbox1Q8BJA3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,79■■■□□ 2,36
Hmbox1Q8BJA3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29,79■■■□□ 2,36
Hmbox1Q8BJA3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Hmbox1Q8BJA3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Hmbox1Q8BJA3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29,52■■■□□ 2,32
Hmbox1Q8BJA3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,49■■■□□ 2,31
Hmbox1Q8BJA3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,3
Hmbox1Q8BJA3 Gm25238-201ENSMUST00000174914 89 ntBASIC29,38■■■□□ 2,29
Hmbox1Q8BJA3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29,36■■■□□ 2,29
Hmbox1Q8BJA3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29,36■■■□□ 2,29
Hmbox1Q8BJA3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,14■■■□□ 2,26
Hmbox1Q8BJA3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,03■■■□□ 2,24
Hmbox1Q8BJA3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,99■■■□□ 2,23
Hmbox1Q8BJA3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Hmbox1Q8BJA3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,91■■■□□ 2,22
Hmbox1Q8BJA3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Hmbox1Q8BJA3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28,77■■■□□ 2,2
Hmbox1Q8BJA3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28,63■■■□□ 2,17
Hmbox1Q8BJA3 Gm25262-201ENSMUST00000174934 133 ntBASIC28,58■■■□□ 2,17
Hmbox1Q8BJA3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,55■■■□□ 2,16
Hmbox1Q8BJA3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,52■■■□□ 2,16
Hmbox1Q8BJA3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,43■■■□□ 2,14
Hmbox1Q8BJA3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28,36■■■□□ 2,13
Hmbox1Q8BJA3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28,35■■■□□ 2,13
Hmbox1Q8BJA3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,25■■■□□ 2,11
Hmbox1Q8BJA3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,25■■■□□ 2,11
Hmbox1Q8BJA3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Hmbox1Q8BJA3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28,21■■■□□ 2,11
Hmbox1Q8BJA3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,18■■■□□ 2,1
Hmbox1Q8BJA3 Gm26115-201ENSMUST00000175605 87 ntBASIC28,16■■■□□ 2,1
Hmbox1Q8BJA3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28,15■■■□□ 2,1
Hmbox1Q8BJA3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28,15■■■□□ 2,1
Hmbox1Q8BJA3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28,06■■■□□ 2,08
Hmbox1Q8BJA3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,03■■■□□ 2,08
Hmbox1Q8BJA3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28,02■■■□□ 2,08
Hmbox1Q8BJA3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,01■■■□□ 2,07
Hmbox1Q8BJA3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2,07
Hmbox1Q8BJA3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27,99■■■□□ 2,07
Hmbox1Q8BJA3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27,99■■■□□ 2,07
Hmbox1Q8BJA3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27,92■■■□□ 2,06
Hmbox1Q8BJA3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27,9■■■□□ 2,06
Hmbox1Q8BJA3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,89■■■□□ 2,06
Hmbox1Q8BJA3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27,89■■■□□ 2,06
Hmbox1Q8BJA3 Gm8109-201ENSMUST00000194076 746 ntBASIC27,88■■■□□ 2,05
Hmbox1Q8BJA3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27,86■■■□□ 2,05
Hmbox1Q8BJA3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27,85■■■□□ 2,05
Hmbox1Q8BJA3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27,76■■■□□ 2,04
Hmbox1Q8BJA3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27,76■■■□□ 2,03
Hmbox1Q8BJA3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
Hmbox1Q8BJA3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,73■■■□□ 2,03
Hmbox1Q8BJA3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27,58■■■□□ 2,01
Hmbox1Q8BJA3 Gm27325-201ENSMUST00000175467 74 ntBASIC27,55■■■□□ 2
Hmbox1Q8BJA3 Rab21-202ENSMUST00000218831 843 ntBASIC27,54■■■□□ 2
Hmbox1Q8BJA3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27,46■■□□□ 1,99
Hmbox1Q8BJA3 Gm10524-201ENSMUST00000181931 1893 ntBASIC27,44■■□□□ 1,98
Hmbox1Q8BJA3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,41■■□□□ 1,98
Hmbox1Q8BJA3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27,41■■□□□ 1,98
Hmbox1Q8BJA3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,34■■□□□ 1,97
Hmbox1Q8BJA3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27,33■■□□□ 1,97
Hmbox1Q8BJA3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,3■■□□□ 1,96
Hmbox1Q8BJA3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27,27■■□□□ 1,96
Hmbox1Q8BJA3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27,26■■□□□ 1,95
Hmbox1Q8BJA3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,24■■□□□ 1,95
Hmbox1Q8BJA3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27,18■■□□□ 1,94
Hmbox1Q8BJA3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27,11■■□□□ 1,93
Hmbox1Q8BJA3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27,1■■□□□ 1,93
Hmbox1Q8BJA3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27,1■■□□□ 1,93
Hmbox1Q8BJA3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27,09■■□□□ 1,93
Hmbox1Q8BJA3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27,05■■□□□ 1,92
Hmbox1Q8BJA3 Gm42596-201ENSMUST00000196305 1958 ntBASIC27■■□□□ 1,91
Hmbox1Q8BJA3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
Hmbox1Q8BJA3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26,94■■□□□ 1,9
Hmbox1Q8BJA3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26,93■■□□□ 1,9
Hmbox1Q8BJA3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,91■■□□□ 1,9
Hmbox1Q8BJA3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26,9■■□□□ 1,9
Hmbox1Q8BJA3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26,89■■□□□ 1,9
Hmbox1Q8BJA3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26,88■■□□□ 1,89
Hmbox1Q8BJA3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Hmbox1Q8BJA3 Gm24804-201ENSMUST00000174982 85 ntBASIC26,86■■□□□ 1,89
Hmbox1Q8BJA3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
Retrieved 100 of 76,532 protein–RNA pairs in 12,3 ms