Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm25239-201ENSMUST00000174915 86 ntBASIC34.49■■■■□ 3.11
Rnf8Q8VC56 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Rnf8Q8VC56 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Rnf8Q8VC56 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rnf8Q8VC56 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Rnf8Q8VC56 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rnf8Q8VC56 Gm15042-201ENSMUST00000120212 883 ntBASIC30.42■■■□□ 2.46
Rnf8Q8VC56 Psd-208ENSMUST00000224556 2034 ntBASIC30.27■■■□□ 2.44
Rnf8Q8VC56 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Rnf8Q8VC56 Gm24109-201ENSMUST00000175489 103 ntBASIC29.73■■■□□ 2.35
Rnf8Q8VC56 Gm15045-201ENSMUST00000117359 883 ntBASIC29.72■■■□□ 2.35
Rnf8Q8VC56 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rnf8Q8VC56 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rnf8Q8VC56 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rnf8Q8VC56 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rnf8Q8VC56 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Rnf8Q8VC56 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Rnf8Q8VC56 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rnf8Q8VC56 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Rnf8Q8VC56 Gm23366-201ENSMUST00000175022 89 ntBASIC28.94■■■□□ 2.22
Rnf8Q8VC56 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.94■■■□□ 2.22
Rnf8Q8VC56 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Rnf8Q8VC56 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Rnf8Q8VC56 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rnf8Q8VC56 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rnf8Q8VC56 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rnf8Q8VC56 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rnf8Q8VC56 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rnf8Q8VC56 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rnf8Q8VC56 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rnf8Q8VC56 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rnf8Q8VC56 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rnf8Q8VC56 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rnf8Q8VC56 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.15■■■□□ 2.1
Rnf8Q8VC56 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf8Q8VC56 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rnf8Q8VC56 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Rnf8Q8VC56 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Rnf8Q8VC56 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Rnf8Q8VC56 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Rnf8Q8VC56 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.86■■■□□ 2.05
Rnf8Q8VC56 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.83■■■□□ 2.05
Rnf8Q8VC56 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rnf8Q8VC56 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.63■■■□□ 2.01
Rnf8Q8VC56 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rnf8Q8VC56 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.45■■□□□ 1.98
Rnf8Q8VC56 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.37■■□□□ 1.97
Rnf8Q8VC56 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.36■■□□□ 1.97
Rnf8Q8VC56 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Rnf8Q8VC56 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.31■■□□□ 1.96
Rnf8Q8VC56 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rnf8Q8VC56 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rnf8Q8VC56 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rnf8Q8VC56 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rnf8Q8VC56 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Rnf8Q8VC56 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.23■■□□□ 1.95
Rnf8Q8VC56 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rnf8Q8VC56 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.22■■□□□ 1.95
Rnf8Q8VC56 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rnf8Q8VC56 Gm25238-201ENSMUST00000174914 89 ntBASIC27.1■■□□□ 1.93
Rnf8Q8VC56 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Rnf8Q8VC56 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.03■■□□□ 1.92
Rnf8Q8VC56 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rnf8Q8VC56 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rnf8Q8VC56 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rnf8Q8VC56 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rnf8Q8VC56 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rnf8Q8VC56 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rnf8Q8VC56 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Rnf8Q8VC56 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
Rnf8Q8VC56 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rnf8Q8VC56 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rnf8Q8VC56 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Rnf8Q8VC56 Gm27325-201ENSMUST00000175467 74 ntBASIC26.71■■□□□ 1.87
Rnf8Q8VC56 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.71■■□□□ 1.87
Rnf8Q8VC56 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rnf8Q8VC56 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rnf8Q8VC56 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rnf8Q8VC56 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rnf8Q8VC56 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.55■■□□□ 1.84
Rnf8Q8VC56 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.55■■□□□ 1.84
Rnf8Q8VC56 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
Rnf8Q8VC56 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.52■■□□□ 1.84
Rnf8Q8VC56 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
Rnf8Q8VC56 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Rnf8Q8VC56 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rnf8Q8VC56 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Rnf8Q8VC56 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rnf8Q8VC56 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Rnf8Q8VC56 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.39■■□□□ 1.82
Rnf8Q8VC56 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rnf8Q8VC56 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Rnf8Q8VC56 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf8Q8VC56 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf8Q8VC56 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rnf8Q8VC56 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rnf8Q8VC56 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rnf8Q8VC56 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rnf8Q8VC56 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rnf8Q8VC56 Rab21-202ENSMUST00000218831 843 ntBASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms