RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 CYP8B1Q9UNU6 501 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 C19orf67A6NJJ6 358 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 KIAA0513O60268 411 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 PRKRAO75569 313 aaKnown RBP9.34□□□□□ -0.91
RAB5B-206ENST00000549505 NKX2-2O95096 273 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 NR2F1P10589 423 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 CDK4P11802 303 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 S1PR1P21453 382 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 GPC1P35052 558 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 TGFBR2P37173 567 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 MC3RP41968 323 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 RAB8AP61006 207 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 TP53BP2Q13625 1128 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 PTGES3Q15185 160 aaKnown RBP9.34□□□□□ -0.91
RAB5B-206ENST00000549505 DCST1Q5T197 706 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 TYW3Q6IPR3 259 aaKnown RBP9.34□□□□□ -0.91
RAB5B-206ENST00000549505 GPR153Q6NV75 609 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 TMEM107Q6UX40 140 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 ISLR2Q6UXK2 745 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 SLC36A4Q6YBV0 504 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 FAM26EQ8N5C1 309 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 SMYD1Q8NB12 490 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 FAM46DQ8NEK8 389 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 SGCDQ92629 289 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 VMP1Q96GC9 406 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 JAM3Q9BX67 310 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 PALMDQ9NP74 551 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 TNRC6BQ9UPQ9 1833 aaKnown RBP9.34□□□□□ -0.91
RAB5B-206ENST00000549505 EFCAB10A6NFE3 127 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 LYPD3O95274 346 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 HNRNPCP07910 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
RAB5B-206ENST00000549505 CELA2BP08218 269 aaPredicted RBP9.34□□□□□ -0.91
RAB5B-206ENST00000549505 XKP51811 444 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 HHEXQ03014 270 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 SQSTM1Q13501 440 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 LAPTM4AQ15012 233 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 SLC43A2Q8N370 569 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 CDRT4Q8N9R6 151 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 AQP11Q8NBQ7 271 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 OR5D16Q8NGK9 328 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 GAB3Q8WWW8 586 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 GGHQ92820 318 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 MACROD1Q9BQ69 325 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 WFDC6Q9BQY6 131 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 GPR174Q9BXC1 333 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 POLDIP3Q9BY77 421 aaKnown RBP9.34□□□□□ -0.91
RAB5B-206ENST00000549505 ADNPQ9H2P0 1102 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 TRIM45Q9H8W5 580 aaPredicted RBP9.34□□□□□ -0.91
RAB5B-206ENST00000549505 HRASLS2Q9NWW9 162 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 CLDN16Q9Y5I7 305 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 KCNE3Q9Y6H6 103 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 A3GALT2U3KPV4 340 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 SPACA6W5XKT8 324 aa9.34□□□□□ -0.91
RAB5B-206ENST00000549505 AGAP5A6NIR3 686 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 SLC22A1O15245 554 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 ACP2P11117 423 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 NAT1P18440 290 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 CCNA2P20248 432 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 ENDOUP21128 410 aaKnown RBP9.34□□□□□ -0.92
RAB5B-206ENST00000549505 CD38P28907 300 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 TPD52P55327 224 aaPredicted RBP9.34□□□□□ -0.92
RAB5B-206ENST00000549505 TMED1Q13445 227 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 FAM111BQ6SJ93 734 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 CSNK1A1LQ8N752 337 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 OR9Q2Q8NGE9 314 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 SLC7A13Q8TCU3 470 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 SLC6A18Q96N87 628 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 FUNDC2Q9BWH2 189 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 MAT2BQ9NZL9 334 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 TMCC3Q9ULS5 477 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 KLHL20Q9Y2M5 609 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 SH3GLB1Q9Y371 365 aa9.34□□□□□ -0.92
RAB5B-206ENST00000549505 NUP210LQ5VU65 1888 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 MDC1Q14676 2089 aaKnown RBP9.33□□□□□ -0.92
RAB5B-206ENST00000549505 CCDC163A0A0D9SF12 145 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 HYKKA2RU49 373 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 SYNDIG1LA6NDD5 238 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 LMO7DNF2Z398 122 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 TLR4O00206 839 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 ALPPP05187 535 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 SERPIND1P05546 499 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF750Q32MQ0 723 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 EIPR1Q53HC9 387 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 ATAD3BQ5T9A4 648 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 CROCCP3Q8IVE0 287 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF595Q8IYB9 648 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 WDR36Q8NI36 951 aaKnown RBP9.33□□□□□ -0.92
RAB5B-206ENST00000549505 JPH3Q8WXH2 748 aaPredicted RBP9.33□□□□□ -0.92
RAB5B-206ENST00000549505 C16orf58Q96GQ5 468 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
RAB5B-206ENST00000549505 DUSP15Q9H1R2 295 aaPredicted RBP9.33□□□□□ -0.92
RAB5B-206ENST00000549505 C2orf42Q9NWW7 574 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 MRPS2Q9Y399 296 aaKnown RBP9.33□□□□□ -0.92
RAB5B-206ENST00000549505 A0A0G2JN53 185 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 A0A1W2PS29 197 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 UBXN7O94888 489 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 NSA2O95478 260 aaKnown RBP9.33□□□□□ -0.92
RAB5B-206ENST00000549505 MT-ND2P03891 347 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 CASP9P55211 416 aa9.33□□□□□ -0.92
RAB5B-206ENST00000549505 RAB15P59190 212 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms