RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 OR4K15Q8NH41 348 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PCNPQ8WW12 178 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 TM4SF19Q96DZ7 209 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MED8Q96G25 268 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SLC35A4Q96G79 324 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 AKR1E2Q96JD6 320 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 POM121L2Q96KW2 1035 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SNX22Q96L94 193 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PPP3R2Q96LZ3 170 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 UBL7Q96S82 380 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 CCDC90BQ9GZT6 254 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CHRNA10Q9GZZ6 450 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 FKRPQ9H9S5 495 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PPANQ9NQ55 473 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 GPR83Q9NYM4 423 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CTNND2Q9UQB3 1225 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PRG3Q9Y2Y8 225 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 OR51B4Q9Y5P0 310 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 NPTNQ9Y639 398 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TTC37Q6PGP7 1564 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 NEDD4P46934 1319 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ARHGAP35Q9NRY4 1499 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 NRXN1Q9ULB1 1477 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ST20-MTHFSA0A0A6YYL1 179 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 TRBV11-1A0A0K0K1C0 115 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 CDRT15L2A8MXV6 281 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 A8MZ25 164 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 TRAFD1O14545 582 aaPredicted RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 EMC8O43402 210 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 PLIN3O60664 434 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ENTPD5O75356 428 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 CYP7B1O75881 506 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 DFFBO76075 338 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 DPEP1P16444 411 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 PAICSP22234 425 aaKnown RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 PAX6P26367 422 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SLC6A6P31641 620 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ACOT2P49753 483 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 MTHFSP49914 203 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 IDH3GP51553 393 aaPredicted RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 MFAP4P55083 255 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 RPL23AP62750 156 aaKnown RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 CKAP4Q07065 602 aaKnown RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 MESP2Q0VG99 397 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 BNIP3Q12983 259 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 PDE7AQ13946 482 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 LAPTM4AQ15012 233 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 KIF19Q2TAC6 998 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ANKRD55Q3KP44 614 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 VPS26BQ4G0F5 336 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 AGKQ53H12 422 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SYPL2Q5VXT5 272 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 LPCAT4Q643R3 524 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 REP15Q6BDI9 236 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 POTEAQ6S8J7 498 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ZNF836Q6ZNA1 936 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 RNF165Q6ZSG1 346 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 BCORP1Q8N888 145 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 DNERQ8NFT8 737 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 OR10K1Q8NGX5 313 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 NUBPLQ8TB37 319 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 CD200R1Q8TD46 325 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 GAL3ST3Q96A11 431 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ZBED6CLQ96FA7 236 aaPredicted RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 DCLRE1CQ96SD1 692 aaKnown RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 C1QTNF2Q9BXJ5 285 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 MAGEB5Q9BZ81 275 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 TM6SF2Q9BZW4 377 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 MIXL1Q9H2W2 232 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 UBQLN3Q9H347 655 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 TMBIM4Q9HC24 238 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 DYRK4Q9NR20 520 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 PRPF19Q9UMS4 504 aaKnown RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 NENFQ9UMX5 172 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 NPHP4O75161 1426 aaPredicted RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 A0A1B0GV72 72 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ISPDA4D126 451 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 C7orf72A4D263 438 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 PRR19A6NJB7 356 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 PROB1E7EW31 1015 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SELENOFO60613 162 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 CLEC3AO75596 197 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SEC14L2O76054 403 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 TM7SF2O76062 418 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 IFNA21P01568 189 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 FTLP02792 175 aaPredicted RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 ZNF30P17039 623 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 GOT1P17174 413 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 CTPS1P17812 591 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SERPINA2P20848 420 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 GMPRP36959 345 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 RBM34P42696 430 aaKnown RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 NKX6-1P78426 367 aaPredicted RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 CHRNB3Q05901 458 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 SLC34A1Q06495 639 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 MZT1Q08AG7 82 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 ABHD18Q0P651 414 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 KRR1Q13601 381 aaKnown RBP3.28□□□□□ -1.88
UBR3-208ENST00000474426 MGAT5BQ3V5L5 792 aa3.28□□□□□ -1.88
UBR3-208ENST00000474426 COX19Q49B96 90 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms