RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 EXT2Q93063 718 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 REPS1Q96D71 796 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 C11orf24Q96F05 449 aaPredicted RBP10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 MAGEB18Q96M61 343 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 SORT1Q99523 831 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 BDH2Q9BUT1 245 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 KLHL31Q9H511 634 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 BRF2Q9HAW0 419 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 EML4Q9HC35 981 aaKnown RBP10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 ADAP2Q9NPF8 381 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 PRTFDC1Q9NRG1 225 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 INTS9Q9NV88 658 aaKnown RBP10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 SIRT5Q9NXA8 310 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 ZNF629Q9UEG4 869 aaPredicted RBP10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 ZNF490Q9ULM2 529 aaPredicted RBP10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 PCDHGB3Q9Y5G1 929 aa10.35□□□□□ -0.75
PRAMEF35P-201ENST00000458709 ANK3Q12955 4377 aaKnown RBP10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 EML6Q6ZMW3 1958 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 A0A0G2JN53 185 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 MYOCOSA0A1B0GUC4 107 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 LRRC3CA6NJW4 275 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 PPP6CO00743 305 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 CLDN4O14493 209 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 CRLF1O75462 422 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 SCELO95171 688 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 EPPINO95925 133 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 IL2RAP01589 272 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 SERPINA6P08185 405 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 SMIM10L1P0DMW3 83 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 CCNG1P51959 295 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 CDH13P55290 713 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 BST1Q10588 318 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 CUL3Q13618 768 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 CHI3L2Q15782 390 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 FBXO48Q5FWF7 155 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 CFAP157Q5JU67 520 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 SWT1Q5T5J6 900 aaKnown RBP10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 PRAMEF20Q5VT98 475 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 FRG2Q64ET8 278 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 ATG16L1Q676U5 607 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 MED27Q6P2C8 311 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 HSDL2Q6YN16 418 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 VN1R5Q7Z5H4 357 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 LACC1Q8IV20 430 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 TBC1D19Q8N5T2 526 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 GBP7Q8N8V2 638 aaPredicted RBP10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 FAM47BQ8NA70 645 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 TRPV3Q8NET8 790 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 OR4F6Q8NGB9 312 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 NEIL3Q8TAT5 605 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 FAM76AQ8TAV0 307 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 SMIM10Q96HG1 83 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 SGCZQ96LD1 299 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 FRG2BQ96QU4 278 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 C20orf27Q9GZN8 174 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 MANSC1Q9H8J5 431 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 ACTR8Q9H981 624 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 CLK4Q9HAZ1 481 aaKnown RBP10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 RAP2CQ9Y3L5 183 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 KIAA1549Q9HCM3 1950 aa10.34□□□□□ -0.75
PRAMEF35P-201ENST00000458709 SEMA3DO95025 777 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 UROSP10746 265 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 ALOX15P16050 662 aaPredicted RBP10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 BGNP21810 368 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 TIMP3P35625 211 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 HSD17B7P56937 341 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 ABCE1P61221 599 aaKnown RBP10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 CSTF3Q12996 717 aaKnown RBP10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 SLC13A2Q13183 592 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 RUNX2Q13950 521 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 SLBPQ14493 270 aaKnown RBP eCLIP10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 ELAVL1Q15717 326 aaKnown RBP10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 TMEM35AQ53FP2 167 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 XKR7Q5GH72 579 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 TOR1AIP1Q5JTV8 583 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 OPN5Q6U736 354 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 LIX1Q8N485 282 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 ANKRD42Q8N9B4 389 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 SNX31Q8N9S9 440 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 TRPC4APQ8TEL6 797 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 ZNF473Q8WTR7 871 aaKnown RBP10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 SMPDL3BQ92485 455 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 ZNF75CPQ92670 426 aaPredicted RBP10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 PERPQ96FX8 193 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 FAR2Q96K12 515 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 PIP5K1AQ99755 562 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 SIKE1Q9BRV8 207 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 OR8D2Q9GZM6 311 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 TNFRSF12AQ9NP84 129 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 JKAMPQ9P055 326 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 SNX6Q9UNH7 406 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 RNF11Q9Y3C5 154 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 CCL27Q9Y4X3 112 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 ANGPTL3Q9Y5C1 460 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 DNAJC15Q9Y5T4 150 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 NCKAP5O14513 1909 aa10.33□□□□□ -0.76
PRAMEF35P-201ENST00000458709 NBEAL1Q6ZS30 2694 aa10.32□□□□□ -0.76
PRAMEF35P-201ENST00000458709 C15orf38-AP3S2A0A0A6YYH1 394 aa10.32□□□□□ -0.76
PRAMEF35P-201ENST00000458709 SH3D21A4FU49 640 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms