RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C YOL036WQ08206 761 aa6.34□□□□□ -1.4
LDB19YOR322C REX3Q12090 404 aa6.34□□□□□ -1.4
LDB19YOR322C CHS5Q12114 671 aaKnown RBP6.34□□□□□ -1.4
LDB19YOR322C CPS1P27614 576 aa6.33□□□□□ -1.4
LDB19YOR322C CNS1P33313 385 aa6.33□□□□□ -1.4
LDB19YOR322C RTT107P38850 1070 aa6.33□□□□□ -1.4
LDB19YOR322C TAT2P38967 592 aa6.33□□□□□ -1.4
LDB19YOR322C PCL7P40186 285 aa6.33□□□□□ -1.4
LDB19YOR322C YIL166CP40445 542 aa6.33□□□□□ -1.4
LDB19YOR322C ROG3P43602 733 aa6.33□□□□□ -1.4
LDB19YOR322C YGR266WP53326 701 aa6.33□□□□□ -1.4
LDB19YOR322C ERV25P54837 211 aaKnown RBP6.33□□□□□ -1.4
LDB19YOR322C RPM2Q02773 1202 aa6.33□□□□□ -1.4
LDB19YOR322C RSC58Q07979 502 aa6.33□□□□□ -1.4
LDB19YOR322C SDH5Q08230 162 aa6.33□□□□□ -1.4
LDB19YOR322C ABP140Q08641 628 aaKnown RBP6.33□□□□□ -1.4
LDB19YOR322C ENT1Q12518 454 aa6.33□□□□□ -1.4
LDB19YOR322C BOI1P38041 980 aaKnown RBP6.33□□□□□ -1.4
LDB19YOR322C ALG3P38179 458 aa6.33□□□□□ -1.4
LDB19YOR322C TCD1P38756 429 aa6.33□□□□□ -1.4
LDB19YOR322C RIO2P40160 425 aaKnown RBP6.33□□□□□ -1.4
LDB19YOR322C MNP1P53163 194 aaPredicted RBP6.33□□□□□ -1.4
LDB19YOR322C ORM1P53224 222 aa6.33□□□□□ -1.4
LDB19YOR322C SML1Q04964 104 aa6.33□□□□□ -1.4
LDB19YOR322C PPM2Q08282 695 aa6.33□□□□□ -1.4
LDB19YOR322C RDS1P25611 832 aa6.32□□□□□ -1.4
LDB19YOR322C MSH2P25847 964 aa6.32□□□□□ -1.4
LDB19YOR322C ICL1P28240 557 aaPredicted RBP6.32□□□□□ -1.4
LDB19YOR322C IMP2'P32351 346 aa6.32□□□□□ -1.4
LDB19YOR322C RRM3P38766 723 aa6.32□□□□□ -1.4
LDB19YOR322C URB2P47108 1174 aa6.32□□□□□ -1.4
LDB19YOR322C PTA1Q01329 785 aaPredicted RBP6.32□□□□□ -1.4
LDB19YOR322C YML108WQ03759 105 aa6.32□□□□□ -1.4
LDB19YOR322C SGD1Q06132 899 aa6.32□□□□□ -1.4
LDB19YOR322C MAK21Q12176 1025 aaKnown RBP6.32□□□□□ -1.4
LDB19YOR322C PBS2P08018 668 aa6.32□□□□□ -1.4
LDB19YOR322C STI1P15705 589 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
LDB19YOR322C SPO16P17122 198 aa6.32□□□□□ -1.4
LDB19YOR322C SWC5P38326 303 aa6.32□□□□□ -1.4
LDB19YOR322C AIM10P39965 576 aaKnown RBP6.32□□□□□ -1.4
LDB19YOR322C VPS70P47161 811 aa6.32□□□□□ -1.4
LDB19YOR322C TAF12Q03761 539 aa6.32□□□□□ -1.4
LDB19YOR322C DCS1Q06151 350 aa6.32□□□□□ -1.4
LDB19YOR322C CDC53Q12018 815 aaKnown RBP6.32□□□□□ -1.4
LDB19YOR322C TFC8Q12308 588 aa6.32□□□□□ -1.4
LDB19YOR322C HCA4P20448 770 aaKnown RBP6.31□□□□□ -1.4
LDB19YOR322C ISY1P21374 235 aaPredicted RBP6.31□□□□□ -1.4
LDB19YOR322C MEI4P29467 408 aa6.31□□□□□ -1.4
LDB19YOR322C ATP3P38077 311 aaKnown RBP6.31□□□□□ -1.4
LDB19YOR322C MBP1P39678 833 aa6.31□□□□□ -1.4
LDB19YOR322C JEM1P40358 645 aa6.31□□□□□ -1.4
LDB19YOR322C YGL242CP53066 181 aa6.31□□□□□ -1.4
LDB19YOR322C RRN5Q02983 363 aa6.31□□□□□ -1.4
LDB19YOR322C TRS130Q03660 1102 aa6.31□□□□□ -1.4
LDB19YOR322C LAP2Q10740 671 aa6.31□□□□□ -1.4
LDB19YOR322C ATG29Q12092 213 aa6.31□□□□□ -1.4
LDB19YOR322C SMC6Q12749 1114 aa6.31□□□□□ -1.4
LDB19YOR322C ADH4P10127 382 aa6.31□□□□□ -1.4
LDB19YOR322C AFR1P33304 620 aa6.31□□□□□ -1.4
LDB19YOR322C YKR018CP36114 725 aa6.31□□□□□ -1.4
LDB19YOR322C YHI9P38765 294 aa6.31□□□□□ -1.4
LDB19YOR322C SMF2P38778 549 aa6.31□□□□□ -1.4
LDB19YOR322C ALB1P47019 175 aaPredicted RBP6.31□□□□□ -1.4
LDB19YOR322C RPL34AP87262 121 aaPredicted RBP6.31□□□□□ -1.4
LDB19YOR322C ESP1Q03018 1630 aa6.31□□□□□ -1.4
LDB19YOR322C UTP14Q04500 899 aaKnown RBP6.31□□□□□ -1.4
LDB19YOR322C YML083CQ04526 418 aa6.31□□□□□ -1.4
LDB19YOR322C PHO92Q06390 306 aa6.31□□□□□ -1.4
LDB19YOR322C NOP6Q07623 225 aaKnown RBP6.31□□□□□ -1.4
LDB19YOR322C MSC6Q08818 692 aaKnown RBP6.31□□□□□ -1.4
LDB19YOR322C MED1Q12321 566 aa6.31□□□□□ -1.4
LDB19YOR322C YAP1P19880 650 aaKnown RBP6.3□□□□□ -1.4
LDB19YOR322C RRP43P25359 394 aaPredicted RBP6.3□□□□□ -1.4
LDB19YOR322C HIR1P32479 840 aa6.3□□□□□ -1.4
LDB19YOR322C PEP7P32609 515 aa6.3□□□□□ -1.4
LDB19YOR322C ARL1P38116 183 aaKnown RBP6.3□□□□□ -1.4
LDB19YOR322C SKP2P42843 763 aa6.3□□□□□ -1.4
LDB19YOR322C UTP22P53254 1237 aaPredicted RBP6.3□□□□□ -1.4
LDB19YOR322C DSE4P53753 1117 aa6.3□□□□□ -1.4
LDB19YOR322C MGR3Q04472 501 aa6.3□□□□□ -1.4
LDB19YOR322C TSR1Q07381 788 aaKnown RBP6.3□□□□□ -1.4
LDB19YOR322C ERG12P07277 443 aa6.3□□□□□ -1.4
LDB19YOR322C MIH1P23748 554 aa6.3□□□□□ -1.4
LDB19YOR322C STV1P37296 890 aa6.3□□□□□ -1.4
LDB19YOR322C MSG5P38590 489 aa6.3□□□□□ -1.4
LDB19YOR322C AGE2P40529 298 aa6.3□□□□□ -1.4
LDB19YOR322C RNR4P49723 345 aaKnown RBP6.3□□□□□ -1.4
LDB19YOR322C HOS3Q02959 697 aaKnown RBP6.3□□□□□ -1.4
LDB19YOR322C YPL109CQ02981 657 aa6.3□□□□□ -1.4
LDB19YOR322C STE20Q03497 939 aaKnown RBP6.3□□□□□ -1.4
LDB19YOR322C GMC2Q06201 188 aa6.3□□□□□ -1.4
LDB19YOR322C NOP12Q08208 459 aaKnown RBP6.3□□□□□ -1.4
LDB19YOR322C RPS3P05750 240 aaKnown RBP6.29□□□□□ -1.4
LDB19YOR322C SCT1P32784 759 aa6.29□□□□□ -1.4
LDB19YOR322C CCZ1P38273 704 aa6.29□□□□□ -1.4
LDB19YOR322C TIF5P38431 405 aaKnown RBP6.29□□□□□ -1.4
LDB19YOR322C SAW1P39735 261 aa6.29□□□□□ -1.4
LDB19YOR322C GPP1P41277 250 aaKnown RBP6.29□□□□□ -1.4
LDB19YOR322C MDV1P47025 714 aa6.29□□□□□ -1.4
LDB19YOR322C HAM1P47119 197 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms