RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C YNR065CP53751 1116 aa3.04□□□□□ -1.92
DNL4YOR005C GNT1Q12096 491 aa3.04□□□□□ -1.92
DNL4YOR005C RRI2Q12348 645 aa3.04□□□□□ -1.92
DNL4YOR005C PHR1P05066 565 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
DNL4YOR005C RAD18P10862 487 aa3.03□□□□□ -1.92
DNL4YOR005C UGA3P26370 528 aa3.03□□□□□ -1.92
DNL4YOR005C AAR2P32357 355 aaPredicted RBP3.03□□□□□ -1.92
DNL4YOR005C LSB6P42951 607 aa3.03□□□□□ -1.92
DNL4YOR005C UTP22P53254 1237 aaPredicted RBP3.03□□□□□ -1.92
DNL4YOR005C PSR2Q07949 397 aa3.03□□□□□ -1.92
DNL4YOR005C SOG2Q08817 791 aa3.03□□□□□ -1.92
DNL4YOR005C YTM1Q12024 460 aaPredicted RBP3.03□□□□□ -1.92
DNL4YOR005C VTH1P40438 1549 aa3.03□□□□□ -1.92
DNL4YOR005C VTH2P40890 1549 aa3.03□□□□□ -1.92
DNL4YOR005C MPH2P0CD99 609 aa3.03□□□□□ -1.92
DNL4YOR005C AEP2P22136 580 aa3.03□□□□□ -1.92
DNL4YOR005C GAR1P28007 205 aaKnown RBP3.03□□□□□ -1.92
DNL4YOR005C MLS1P30952 554 aa3.03□□□□□ -1.92
DNL4YOR005C MRS6P32864 603 aaKnown RBP3.03□□□□□ -1.92
DNL4YOR005C NIC96P34077 839 aa3.03□□□□□ -1.92
DNL4YOR005C PTH2P34222 208 aa3.03□□□□□ -1.92
DNL4YOR005C ARL1P38116 183 aaKnown RBP3.03□□□□□ -1.92
DNL4YOR005C EXO84P38261 753 aa3.03□□□□□ -1.92
DNL4YOR005C CKB2P38930 258 aa3.03□□□□□ -1.92
DNL4YOR005C OAF1P39720 1047 aaPredicted RBP3.03□□□□□ -1.92
DNL4YOR005C GPP2P40106 250 aaKnown RBP3.03□□□□□ -1.92
DNL4YOR005C CAF16P43569 289 aa3.03□□□□□ -1.92
DNL4YOR005C RSC8P43609 557 aaKnown RBP3.03□□□□□ -1.92
DNL4YOR005C COG8Q04632 607 aa3.03□□□□□ -1.92
DNL4YOR005C YBT1P32386 1661 aa3.03□□□□□ -1.92
DNL4YOR005C DLD1P32891 587 aa3.02□□□□□ -1.93
DNL4YOR005C AFR1P33304 620 aa3.02□□□□□ -1.93
DNL4YOR005C ALG3P38179 458 aa3.02□□□□□ -1.93
DNL4YOR005C PCM1P38628 557 aaKnown RBP3.02□□□□□ -1.93
DNL4YOR005C PNT1P38969 423 aa3.02□□□□□ -1.93
DNL4YOR005C AIR1P40507 360 aaKnown RBP3.02□□□□□ -1.93
DNL4YOR005C LCD1Q04377 747 aa3.02□□□□□ -1.93
DNL4YOR005C MLC2Q06580 163 aa3.02□□□□□ -1.93
DNL4YOR005C YIG1Q08956 461 aa3.02□□□□□ -1.93
DNL4YOR005C HSC82P15108 705 aaKnown RBP3.02□□□□□ -1.93
DNL4YOR005C RET1P22276 1149 aaKnown RBP3.02□□□□□ -1.93
DNL4YOR005C KCC4P25389 1037 aa3.02□□□□□ -1.93
DNL4YOR005C SSH4P32343 579 aa3.02□□□□□ -1.93
DNL4YOR005C PRP19P32523 503 aaKnown RBP3.02□□□□□ -1.93
DNL4YOR005C NFU1P32860 256 aa3.02□□□□□ -1.93
DNL4YOR005C RPT2P40327 437 aaKnown RBP3.02□□□□□ -1.93
DNL4YOR005C HOS4P40480 1083 aa3.02□□□□□ -1.93
DNL4YOR005C FET4P40988 552 aa3.02□□□□□ -1.93
DNL4YOR005C GZF3P42944 551 aaKnown RBP3.02□□□□□ -1.93
DNL4YOR005C YJL181WP46987 611 aa3.02□□□□□ -1.93
DNL4YOR005C UBP15P50101 1230 aa3.02□□□□□ -1.93
DNL4YOR005C SNF2P22082 1703 aa3.02□□□□□ -1.93
DNL4YOR005C MRPL16P38064 232 aa3.01□□□□□ -1.93
DNL4YOR005C RIM4P38741 713 aa3.01□□□□□ -1.93
DNL4YOR005C YJR098CP47139 656 aa3.01□□□□□ -1.93
DNL4YOR005C YGR283CP53336 341 aaPredicted RBP3.01□□□□□ -1.93
DNL4YOR005C PAP2P53632 584 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C SNP1Q00916 300 aaPredicted RBP3.01□□□□□ -1.93
DNL4YOR005C ATP25Q03153 612 aa3.01□□□□□ -1.93
DNL4YOR005C HEH2Q03281 663 aa3.01□□□□□ -1.93
DNL4YOR005C DUS3Q06053 668 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C ADE8P04161 214 aa3.01□□□□□ -1.93
DNL4YOR005C APA1P16550 321 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C CLC1P17891 233 aa3.01□□□□□ -1.93
DNL4YOR005C AFT1P22149 690 aa3.01□□□□□ -1.93
DNL4YOR005C HEM12P32347 362 aaPredicted RBP3.01□□□□□ -1.93
DNL4YOR005C STO1P34160 861 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C YKL133CP36066 463 aa3.01□□□□□ -1.93
DNL4YOR005C YHL041WP38730 149 aa3.01□□□□□ -1.93
DNL4YOR005C BRE2P43132 505 aa3.01□□□□□ -1.93
DNL4YOR005C GYP8P43570 497 aa3.01□□□□□ -1.93
DNL4YOR005C MNN11P46985 422 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C HAS1Q03532 505 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C GUD1Q07729 489 aa3.01□□□□□ -1.93
DNL4YOR005C TY1B-HO13535 1793 aa3.01□□□□□ -1.93
DNL4YOR005C TY1B-DR5P0C2I2 1755 aa3.01□□□□□ -1.93
DNL4YOR005C TY1B-DR6P0C2I3 1755 aa3.01□□□□□ -1.93
DNL4YOR005C TY1B-LR2P0C2I5 1755 aa3.01□□□□□ -1.93
DNL4YOR005C TY1B-LR3P0C2I6 1755 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C TY1B-PR1P0C2I9 1755 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C TY1B-PR2P0C2J0 1756 aa3.01□□□□□ -1.93
DNL4YOR005C TY1B-PR3P0C2J1 1755 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C TY1B-JR1P47098 1755 aa3.01□□□□□ -1.93
DNL4YOR005C TY1B-ML2Q03434 1755 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C TY1B-ER1Q03612 1755 aa3.01□□□□□ -1.93
DNL4YOR005C TY1B-ML1Q04711 1755 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C TY1B-GR2Q12269 1755 aa3.01□□□□□ -1.93
DNL4YOR005C TY1B-OLQ12273 1755 aa3.01□□□□□ -1.93
DNL4YOR005C TY1B-PLQ12414 1755 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C RPP1AP05318 106 aaPredicted RBP3.01□□□□□ -1.93
DNL4YOR005C PPH3P32345 308 aa3.01□□□□□ -1.93
DNL4YOR005C YRO2P38079 344 aa3.01□□□□□ -1.93
DNL4YOR005C TOK1P40310 691 aa3.01□□□□□ -1.93
DNL4YOR005C IES1P43579 692 aa3.01□□□□□ -1.93
DNL4YOR005C PTK2P47116 818 aaKnown RBP3.01□□□□□ -1.93
DNL4YOR005C MDM1Q01846 1127 aa3.01□□□□□ -1.93
DNL4YOR005C YML131WQ03102 365 aa3.01□□□□□ -1.93
DNL4YOR005C SPP382Q06411 708 aaPredicted RBP3.01□□□□□ -1.93
DNL4YOR005C ERP4Q12450 207 aa3.01□□□□□ -1.93
DNL4YOR005C PTC5Q12511 572 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms