RNA–Protein interactions for RNA: YMR063W

RIM9, Transcript of Plasma membrane protein of unknown function, yeast

Gene RIM9, Length 720 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM9	YMR063W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
RIM9	YMR063W	HOS3	Q02959	697 aa	Known RBP	4.29	□□□□□ -1.72
RIM9	YMR063W	SPP382	Q06411	708 aa	Predicted RBP	4.29	□□□□□ -1.72
RIM9	YMR063W	TDA5	Q06417	326 aa	Known RBP	4.29	□□□□□ -1.72
RIM9	YMR063W	FKS3	Q04952	1785 aa		4.29	□□□□□ -1.72
RIM9	YMR063W	URB1	P34241	1764 aa	Known RBP	4.28	□□□□□ -1.72
RIM9	YMR063W	COQ4	O13525	335 aa		4.28	□□□□□ -1.72
RIM9	YMR063W	SNF5	P18480	905 aa		4.28	□□□□□ -1.72
RIM9	YMR063W	SPF1	P39986	1215 aa	Known RBP	4.28	□□□□□ -1.72
RIM9	YMR063W	INP52	P50942	1183 aa		4.28	□□□□□ -1.72
RIM9	YMR063W	BRE4	Q07660	1125 aa		4.28	□□□□□ -1.72
RIM9	YMR063W	GNT1	Q12096	491 aa		4.28	□□□□□ -1.72
RIM9	YMR063W	RKM4	Q12504	494 aa		4.28	□□□□□ -1.72
RIM9	YMR063W	RPL11A	P0C0W9	174 aa	Known RBP	4.27	□□□□□ -1.73
RIM9	YMR063W	ADP1	P25371	1049 aa		4.27	□□□□□ -1.73
RIM9	YMR063W	GRX1	P25373	110 aa	Known RBP	4.27	□□□□□ -1.73
RIM9	YMR063W	AGP1	P25376	633 aa		4.27	□□□□□ -1.73
RIM9	YMR063W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
RIM9	YMR063W	MDL2	P33311	773 aa		4.27	□□□□□ -1.73
RIM9	YMR063W	VBA5	P36172	582 aa		4.27	□□□□□ -1.73
RIM9	YMR063W	SIP5	P40210	489 aa	Known RBP	4.27	□□□□□ -1.73
RIM9	YMR063W	RPL11B	Q3E757	174 aa	Predicted RBP	4.27	□□□□□ -1.73
RIM9	YMR063W	ADE6	P38972	1358 aa	Known RBP	4.27	□□□□□ -1.73
RIM9	YMR063W	SBA1	P28707	216 aa	Known RBP	4.26	□□□□□ -1.73
RIM9	YMR063W	HSP78	P33416	811 aa		4.26	□□□□□ -1.73
RIM9	YMR063W	RPN3	P40016	523 aa	Known RBP	4.26	□□□□□ -1.73
RIM9	YMR063W	RSC58	Q07979	502 aa		4.26	□□□□□ -1.73
RIM9	YMR063W	LPX1	Q12405	387 aa	Known RBP	4.26	□□□□□ -1.73
RIM9	YMR063W	GLT1	Q12680	2145 aa	Known RBP	4.26	□□□□□ -1.73
RIM9	YMR063W	SRO9	P25567	434 aa	Known RBP	4.25	□□□□□ -1.73
RIM9	YMR063W	STE5	P32917	917 aa		4.25	□□□□□ -1.73
RIM9	YMR063W	CCZ1	P38273	704 aa		4.25	□□□□□ -1.73
RIM9	YMR063W	PNT1	P38969	423 aa		4.25	□□□□□ -1.73
RIM9	YMR063W	RSB1	Q08417	382 aa		4.25	□□□□□ -1.73
RIM9	YMR063W	UGA2	P38067	497 aa		4.24	□□□□□ -1.73
RIM9	YMR063W	BAP2	P38084	609 aa		4.24	□□□□□ -1.73
RIM9	YMR063W	YBR184W	P38299	523 aa		4.24	□□□□□ -1.73
RIM9	YMR063W	PAF1	P38351	445 aa		4.24	□□□□□ -1.73
RIM9	YMR063W	TAT2	P38967	592 aa		4.24	□□□□□ -1.73
RIM9	YMR063W	PSK1	P31374	1356 aa		4.24	□□□□□ -1.73
RIM9	YMR063W	YLR419W	Q06698	1435 aa	Known RBP	4.23	□□□□□ -1.73
RIM9	YMR063W	RAD4	P14736	754 aa		4.23	□□□□□ -1.73
RIM9	YMR063W	PPH3	P32345	308 aa		4.23	□□□□□ -1.73
RIM9	YMR063W	SLA2	P33338	968 aa		4.23	□□□□□ -1.73
RIM9	YMR063W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
RIM9	YMR063W	LRG1	P35688	1017 aa		4.23	□□□□□ -1.73
RIM9	YMR063W	POL12	P38121	705 aa	Predicted RBP	4.23	□□□□□ -1.73
RIM9	YMR063W	PIK1	P39104	1066 aa		4.23	□□□□□ -1.73
RIM9	YMR063W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
RIM9	YMR063W	NBA1	Q08229	501 aa	Known RBP	4.23	□□□□□ -1.73
RIM9	YMR063W	YML133C	Q03099	1374 aa		4.23	□□□□□ -1.73
RIM9	YMR063W	YLL067C	Q07888	1374 aa		4.23	□□□□□ -1.73
RIM9	YMR063W	YLL066C	Q99208	1374 aa		4.23	□□□□□ -1.73
RIM9	YMR063W	APC1	P53886	1748 aa		4.23	□□□□□ -1.73
RIM9	YMR063W	BI4	P03879	638 aa		4.22	□□□□□ -1.73
RIM9	YMR063W	SPS1	P08458	490 aa		4.22	□□□□□ -1.73
RIM9	YMR063W	ETP1	P38748	585 aa	Known RBP	4.22	□□□□□ -1.73
RIM9	YMR063W	NAN1	Q02931	896 aa	Known RBP	4.22	□□□□□ -1.73
RIM9	YMR063W	SHE9	Q04172	456 aa		4.22	□□□□□ -1.73
RIM9	YMR063W	ACM1	Q08981	209 aa		4.22	□□□□□ -1.73
RIM9	YMR063W	MLP1	Q02455	1875 aa	Known RBP	4.22	□□□□□ -1.73
RIM9	YMR063W	MRP8	P35719	219 aa		4.21	□□□□□ -1.74
RIM9	YMR063W	ESL2	P36168	1195 aa		4.21	□□□□□ -1.74
RIM9	YMR063W	ABZ1	P37254	787 aa	Predicted RBP	4.21	□□□□□ -1.74
RIM9	YMR063W	KRI1	P42846	591 aa	Known RBP	4.21	□□□□□ -1.74
RIM9	YMR063W	TIM54	P47045	478 aa		4.21	□□□□□ -1.74
RIM9	YMR063W	TAF8	Q03750	510 aa		4.21	□□□□□ -1.74
RIM9	YMR063W	HRQ1	Q05549	1077 aa		4.21	□□□□□ -1.74
RIM9	YMR063W	SVS1	Q12254	260 aa		4.21	□□□□□ -1.74
RIM9	YMR063W	DFG16	Q99234	619 aa		4.21	□□□□□ -1.74
RIM9	YMR063W	YKL151C	P36059	337 aa		4.2	□□□□□ -1.74
RIM9	YMR063W	GEM1	P39722	662 aa		4.2	□□□□□ -1.74
RIM9	YMR063W	IOC3	P43596	787 aa		4.2	□□□□□ -1.74
RIM9	YMR063W	PFD1	P46988	109 aa		4.2	□□□□□ -1.74
RIM9	YMR063W	NNF1	P47149	201 aa		4.2	□□□□□ -1.74
RIM9	YMR063W	FOL2	P51601	243 aa	Known RBP	4.2	□□□□□ -1.74
RIM9	YMR063W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
RIM9	YMR063W	DUS3	Q06053	668 aa	Known RBP	4.2	□□□□□ -1.74
RIM9	YMR063W	YDR306C	Q06640	478 aa		4.2	□□□□□ -1.74
RIM9	YMR063W	UBX5	Q06682	500 aa		4.2	□□□□□ -1.74
RIM9	YMR063W	FMP25	Q08023	583 aa		4.2	□□□□□ -1.74
RIM9	YMR063W	YDL177C	Q12257	170 aa		4.2	□□□□□ -1.74
RIM9	YMR063W	TAF5	P38129	798 aa		4.19	□□□□□ -1.74
RIM9	YMR063W	PBY1	P38254	753 aa		4.19	□□□□□ -1.74
RIM9	YMR063W	SNF7	P39929	240 aa	Known RBP	4.19	□□□□□ -1.74
RIM9	YMR063W	SAH1	P39954	449 aa	Known RBP	4.19	□□□□□ -1.74
RIM9	YMR063W	IRR1	P40541	1150 aa		4.19	□□□□□ -1.74
RIM9	YMR063W	HUL5	P53119	910 aa		4.19	□□□□□ -1.74
RIM9	YMR063W	PRP43	P53131	767 aa	Known RBP	4.19	□□□□□ -1.74
RIM9	YMR063W	ENT1	Q12518	454 aa		4.19	□□□□□ -1.74
RIM9	YMR063W	SNF2	P22082	1703 aa		4.18	□□□□□ -1.74
RIM9	YMR063W	ACE2	P21192	770 aa		4.18	□□□□□ -1.74
RIM9	YMR063W	APL1	P27351	700 aa		4.18	□□□□□ -1.74
RIM9	YMR063W	RPL8B	P29453	256 aa	Known RBP	4.18	□□□□□ -1.74
RIM9	YMR063W	SEG2	P34250	1132 aa		4.18	□□□□□ -1.74
RIM9	YMR063W	ERT1	P38140	529 aa		4.18	□□□□□ -1.74
RIM9	YMR063W	OCA5	P38738	679 aa		4.18	□□□□□ -1.74
RIM9	YMR063W	SEC26	P41810	973 aa	Known RBP	4.18	□□□□□ -1.74
RIM9	YMR063W	ALR2	P43553	858 aa		4.18	□□□□□ -1.74
RIM9	YMR063W	XYL2	Q07993	356 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 132.9 ms