RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	MNL2	Q12205	849 aa		10.77	□□□□□ -0.69
SAM1	YLR180W	ADE2	P21264	571 aa	Known RBP	10.76	□□□□□ -0.69
SAM1	YLR180W	SAS3	P34218	831 aa		10.76	□□□□□ -0.69
SAM1	YLR180W	PEX28	P38848	579 aa		10.76	□□□□□ -0.69
SAM1	YLR180W	YAP1801	P38856	637 aa		10.76	□□□□□ -0.69
SAM1	YLR180W	AKR1	P39010	764 aa		10.76	□□□□□ -0.69
SAM1	YLR180W	YIR016W	P40572	265 aa		10.76	□□□□□ -0.69
SAM1	YLR180W	JJJ3	P47138	172 aa		10.76	□□□□□ -0.69
SAM1	YLR180W	ENT3	P47160	408 aa		10.76	□□□□□ -0.69
SAM1	YLR180W	SMC5	Q08204	1093 aa		10.76	□□□□□ -0.69
SAM1	YLR180W	ILV1	P00927	576 aa	Known RBP	10.75	□□□□□ -0.69
SAM1	YLR180W	APE1	P14904	514 aa		10.75	□□□□□ -0.69
SAM1	YLR180W	PUP3	P25451	205 aa	Known RBP	10.75	□□□□□ -0.69
SAM1	YLR180W	RDS1	P25611	832 aa		10.75	□□□□□ -0.69
SAM1	YLR180W	CSE2	P33308	149 aa		10.75	□□□□□ -0.69
SAM1	YLR180W	RXT2	P38255	430 aa		10.75	□□□□□ -0.69
SAM1	YLR180W	YLR422W	Q06409	1932 aa		10.74	□□□□□ -0.69
SAM1	YLR180W	RFT1	P38206	574 aa	Predicted RBP	10.74	□□□□□ -0.69
SAM1	YLR180W	RKM3	P38222	552 aa		10.74	□□□□□ -0.69
SAM1	YLR180W	LEO1	P38439	464 aa		10.74	□□□□□ -0.69
SAM1	YLR180W	MAF1	P41910	395 aa		10.74	□□□□□ -0.69
SAM1	YLR180W	EPL1	P43572	832 aa		10.74	□□□□□ -0.69
SAM1	YLR180W	SPP1	Q03012	353 aa		10.74	□□□□□ -0.69
SAM1	YLR180W	COQ9	Q05779	260 aa		10.74	□□□□□ -0.69
SAM1	YLR180W	APC11	Q12157	165 aa		10.74	□□□□□ -0.69
SAM1	YLR180W	NCR1	Q12200	1170 aa		10.74	□□□□□ -0.69
SAM1	YLR180W	RRD2	Q12461	358 aa		10.74	□□□□□ -0.69
SAM1	YLR180W	DDP1	Q99321	188 aa	Known RBP	10.74	□□□□□ -0.69
SAM1	YLR180W	PEX1	P24004	1043 aa		10.73	□□□□□ -0.69
SAM1	YLR180W	YKL097C	P34245	136 aa		10.73	□□□□□ -0.69
SAM1	YLR180W	GCS1	P35197	352 aa		10.73	□□□□□ -0.69
SAM1	YLR180W	SAF1	P38352	637 aa		10.73	□□□□□ -0.69
SAM1	YLR180W	XDJ1	P39102	459 aa		10.73	□□□□□ -0.69
SAM1	YLR180W	MGA2	P40578	1113 aa		10.73	□□□□□ -0.69
SAM1	YLR180W	LAM5	P43560	674 aa		10.73	□□□□□ -0.69
SAM1	YLR180W	TPO2	P53283	614 aa		10.73	□□□□□ -0.69
SAM1	YLR180W	GIS4	Q04233	774 aa		10.73	□□□□□ -0.69
SAM1	YLR180W	CSM3	Q04659	317 aa		10.73	□□□□□ -0.69
SAM1	YLR180W	MRI1	Q06489	411 aa	Known RBP	10.73	□□□□□ -0.69
SAM1	YLR180W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	10.73	□□□□□ -0.69	not detected
SAM1	YLR180W	TAF13	P11747	167 aa		10.72	□□□□□ -0.69
SAM1	YLR180W	CLN3	P13365	580 aa		10.72	□□□□□ -0.69
SAM1	YLR180W	FRS2	P15625	503 aa	Known RBP	10.72	□□□□□ -0.69
SAM1	YLR180W	CCL1	P37366	393 aa		10.72	□□□□□ -0.69
SAM1	YLR180W	ORC6	P38826	435 aa		10.72	□□□□□ -0.69
SAM1	YLR180W	RPN10	P38886	268 aa	Known RBP	10.72	□□□□□ -0.69
SAM1	YLR180W	GAA1	P39012	614 aa		10.72	□□□□□ -0.69
SAM1	YLR180W	CIT3	P43635	486 aa		10.72	□□□□□ -0.69
SAM1	YLR180W	DIP5	P53388	608 aa		10.72	□□□□□ -0.69
SAM1	YLR180W	MFM1	Q02783	413 aa		10.72	□□□□□ -0.69
SAM1	YLR180W	DOT1	Q04089	582 aa	Known RBP	10.72	□□□□□ -0.69
SAM1	YLR180W	YPR148C	Q06523	435 aa		10.72	□□□□□ -0.69
SAM1	YLR180W	HSP82	P02829	709 aa	Known RBP	10.71	□□□□□ -0.69
SAM1	YLR180W	SUP45	P12385	437 aa	Known RBP	10.71	□□□□□ -0.69
SAM1	YLR180W	SWI4	P25302	1093 aa	Known RBP	10.71	□□□□□ -0.69
SAM1	YLR180W	MAP2	P38174	421 aa	Known RBP	10.71	□□□□□ -0.69
SAM1	YLR180W	ARP1	P38696	384 aa		10.71	□□□□□ -0.69
SAM1	YLR180W	PCI8	P40512	444 aa		10.71	□□□□□ -0.69
SAM1	YLR180W	FIS1	P40515	155 aa		10.71	□□□□□ -0.69
SAM1	YLR180W	RSC1	P53236	928 aa		10.71	□□□□□ -0.69
SAM1	YLR180W	FAP1	P53971	965 aa		10.71	□□□□□ -0.69
SAM1	YLR180W	YOR022C	Q12204	715 aa		10.71	□□□□□ -0.69
SAM1	YLR180W	ADE4	P04046	510 aa	Known RBP	10.7	□□□□□ -0.7
SAM1	YLR180W	YGL138C	P53122	345 aa		10.7	□□□□□ -0.7
SAM1	YLR180W	DSE4	P53753	1117 aa		10.7	□□□□□ -0.7
SAM1	YLR180W	YDR344C	Q05510	147 aa		10.7	□□□□□ -0.7
SAM1	YLR180W	RPL22A	P05749	121 aa	Known RBP	10.69	□□□□□ -0.7
SAM1	YLR180W	HCA4	P20448	770 aa	Known RBP	10.69	□□□□□ -0.7
SAM1	YLR180W	TMT1	P32643	299 aa		10.69	□□□□□ -0.7
SAM1	YLR180W	ROD1	Q02805	837 aa		10.69	□□□□□ -0.7
SAM1	YLR180W	CEX1	Q12453	761 aa		10.69	□□□□□ -0.7
SAM1	YLR180W	NPR3	P38742	1146 aa		10.68	□□□□□ -0.7
SAM1	YLR180W	BRE2	P43132	505 aa		10.68	□□□□□ -0.7
SAM1	YLR180W	NAF1	P53919	492 aa	Known RBP	10.68	□□□□□ -0.7
SAM1	YLR180W	GET3	Q12154	354 aa	Known RBP	10.68	□□□□□ -0.7
SAM1	YLR180W	PKH2	Q12236	1081 aa	Known RBP	10.68	□□□□□ -0.7
SAM1	YLR180W	CCH1	P50077	2039 aa		10.68	□□□□□ -0.7
SAM1	YLR180W	FMP27	Q06179	2628 aa		10.68	□□□□□ -0.7
SAM1	YLR180W	HXK1	P04806	485 aa	Known RBP	10.67	□□□□□ -0.7
SAM1	YLR180W	GSY1	P23337	708 aa		10.67	□□□□□ -0.7
SAM1	YLR180W	RSA4	P25382	515 aa	Known RBP	10.67	□□□□□ -0.7
SAM1	YLR180W	BIO2	P32451	375 aa		10.67	□□□□□ -0.7
SAM1	YLR180W	YKT6	P36015	200 aa	Known RBP	10.67	□□□□□ -0.7
SAM1	YLR180W	RIM4	P38741	713 aa		10.67	□□□□□ -0.7
SAM1	YLR180W	YPT11	P48559	417 aa		10.67	□□□□□ -0.7
SAM1	YLR180W	NOC3	Q07896	663 aa	Predicted RBP	10.67	□□□□□ -0.7
SAM1	YLR180W	ESC8	Q08119	714 aa		10.67	□□□□□ -0.7
SAM1	YLR180W	DCS2	Q12123	353 aa		10.67	□□□□□ -0.7
SAM1	YLR180W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	10.66	□□□□□ -0.7	not detected
SAM1	YLR180W	GLN3	P18494	730 aa		10.66	□□□□□ -0.7
SAM1	YLR180W	PEX2	P32800	271 aa		10.66	□□□□□ -0.7
SAM1	YLR180W	COY1	P34237	679 aa		10.66	□□□□□ -0.7
SAM1	YLR180W	ATG19	P35193	415 aa		10.66	□□□□□ -0.7
SAM1	YLR180W	YEL023C	P39992	682 aa		10.66	□□□□□ -0.7
SAM1	YLR180W	FYV10	P40492	516 aa		10.66	□□□□□ -0.7
SAM1	YLR180W	RET3	P53600	189 aa		10.66	□□□□□ -0.7
SAM1	YLR180W	PML39	Q03760	334 aa		10.66	□□□□□ -0.7
SAM1	YLR180W	CDC6	P09119	513 aa		10.65	□□□□□ -0.7
SAM1	YLR180W	RAM1	P22007	431 aa		10.65	□□□□□ -0.7
SAM1	YLR180W	MCM3	P24279	971 aa	Known RBP	10.65	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms